BLASTX nr result

ID: Coptis23_contig00026606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026606
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329746.1| predicted protein [Populus trichocarpa] gi|2...   225   8e-57
ref|XP_004137520.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   208   8e-52
gb|ABY61022.1| zinc finger-homeodomain protein 3, partial [Eschs...   205   8e-51
ref|XP_002318316.1| predicted protein [Populus trichocarpa] gi|2...   197   1e-48
gb|ABY61026.1| zinc finger-homeodomain protein 1, partial [Lirio...   197   2e-48

>ref|XP_002329746.1| predicted protein [Populus trichocarpa] gi|222870654|gb|EEF07785.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  225 bits (573), Expect = 8e-57
 Identities = 120/190 (63%), Positives = 142/190 (74%), Gaps = 12/190 (6%)
 Frame = -2

Query: 664 MDRDDSNELYKECLRNHAASLGSFATDGCGEFTLDYT-VPDMLKCAACGCHRNFHRKVIV 488
           M+ D++N+LYKECLRNHAASLGS+ATDGCGEFTLD T  P  L+CAACGCHRNFHRK  V
Sbjct: 1   MESDNTNDLYKECLRNHAASLGSYATDGCGEFTLDDTSSPYSLQCAACGCHRNFHRK--V 58

Query: 487 TMSTGACRRDGMGSSFLGRDTDVVELLEYGAGHS-----------NESERSGKKRVRTKF 341
           T S  + RRD +       +T V+E+++Y  G++              ERSGKKR RTKF
Sbjct: 59  TYSNSSNRRDHIMHP-PSSETVVMEMIDYAEGNNERDFRPPVMVVESGERSGKKRYRTKF 117

Query: 340 SEEQKEKMLAFAEKLGWRIKRKDGEEDEIERFCRSVGVSRQVFKVWMHNHKNSSSSPSFH 161
           + EQKEKML FAEKLGW+++RKD EEDE+ERFCR +G+SRQVFKVWMHNHKNSSSS S  
Sbjct: 118 TPEQKEKMLGFAEKLGWKLQRKD-EEDEVERFCRGIGISRQVFKVWMHNHKNSSSSTSAS 176

Query: 160 HITGNVSSLT 131
             TGN SSLT
Sbjct: 177 --TGNASSLT 184


>ref|XP_004137520.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Cucumis sativus]
           gi|449534323|ref|XP_004174113.1| PREDICTED: ZF-HD
           homeobox protein At4g24660-like [Cucumis sativus]
          Length = 177

 Score =  208 bits (530), Expect = 8e-52
 Identities = 114/186 (61%), Positives = 135/186 (72%), Gaps = 7/186 (3%)
 Frame = -2

Query: 664 MDRDDSNELYKECLRNHAASLGSFATDGCGEFTLD--YTVPDMLKCAACGCHRNFHRKVI 491
           MD ++SN  Y+ECLRNHAASLGS+ATDGCGEFTLD   +  ++L CAACGCHRNFHRKV 
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKV- 59

Query: 490 VTMSTGACRRDGMGSSFLGRDTDVVE-----LLEYGAGHSNESERSGKKRVRTKFSEEQK 326
            T   G     G  S+    D D+++     ++EY A  +  S    KKR RTKF+ +QK
Sbjct: 60  -TYIAGG----GRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQK 114

Query: 325 EKMLAFAEKLGWRIKRKDGEEDEIERFCRSVGVSRQVFKVWMHNHKNSSSSPSFHHITGN 146
           EKMLAFAEKLGW+++RKD  +DEIERFCRSVGV+RQVFKVWMHNHKNS SS S    TGN
Sbjct: 115 EKMLAFAEKLGWKLQRKD-LDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSAS--TGN 171

Query: 145 VSSLTQ 128
            SSLTQ
Sbjct: 172 ASSLTQ 177


>gb|ABY61022.1| zinc finger-homeodomain protein 3, partial [Eschscholzia
           californica]
          Length = 192

 Score =  205 bits (521), Expect = 8e-51
 Identities = 111/190 (58%), Positives = 136/190 (71%), Gaps = 14/190 (7%)
 Frame = -2

Query: 655 DDSNELYKECLRNHAASLGSFATDGCGEFTLDYTVPDMLKCAACGCHRNFHRKVIVTMST 476
           + SNE Y++CLRNHAASLGS+ATDGCGEFTL+ + P  LKCAACGCHRNFHRK+++  S 
Sbjct: 11  EGSNESYRDCLRNHAASLGSYATDGCGEFTLNDSSPGELKCAACGCHRNFHRKIVIA-SN 69

Query: 475 GACRRDGMGSSFLGRDTDVVELLEYGAGH-----SNESERS--GKKRVRTKFSEEQKEKM 317
            +  RD +         +  E++EYGA H     S+E ERS   KKR RTKF+ EQKEKM
Sbjct: 70  VSISRDSVYE-------EEEEMIEYGARHLNSMSSHEIERSTVNKKRNRTKFTVEQKEKM 122

Query: 316 LAFAEKLGWRIKRKD----GEEDEIERFCRSVGVSRQVFKVWMHNHKNSSS---SPSFHH 158
           L FAEKLGW++ RKD    G+ED+I RFCRS+G+SRQVFKVWMHNHKN SS   + +  +
Sbjct: 123 LEFAEKLGWKMIRKDEDKNGDEDQIGRFCRSLGISRQVFKVWMHNHKNISSPSTTTTSAY 182

Query: 157 ITGNVSSLTQ 128
              N SSLTQ
Sbjct: 183 ANNNASSLTQ 192


>ref|XP_002318316.1| predicted protein [Populus trichocarpa] gi|222858989|gb|EEE96536.1|
           predicted protein [Populus trichocarpa]
          Length = 156

 Score =  197 bits (502), Expect = 1e-48
 Identities = 101/163 (61%), Positives = 122/163 (74%), Gaps = 11/163 (6%)
 Frame = -2

Query: 637 YKECLRNHAASLGSFATDGCGEFTLDYTVPDMLKCAACGCHRNFHRKVIVTMSTGACRRD 458
           YKECLRNHAASLGS+ATDGCGEFTLD T    L+CAACGCHRNFHRKV     + + RRD
Sbjct: 1   YKECLRNHAASLGSYATDGCGEFTLDDTSLSTLQCAACGCHRNFHRKV-----SYSNRRD 55

Query: 457 GMGSSFLGRDTDVVELLEYGAGHSNES-----------ERSGKKRVRTKFSEEQKEKMLA 311
            +  S    +T V+E+++Y  G++  +           ERSGKKR RTKF+ EQ+EKM+ 
Sbjct: 56  HIMHS-PSSETVVMEMMDYAEGNNERNSRPPVMVVESGERSGKKRFRTKFTAEQREKMME 114

Query: 310 FAEKLGWRIKRKDGEEDEIERFCRSVGVSRQVFKVWMHNHKNS 182
           FAEKLGW+++RKD EEDE+ERFC  +GVSRQVFKVWMHNHKNS
Sbjct: 115 FAEKLGWKLQRKD-EEDEVERFCEGIGVSRQVFKVWMHNHKNS 156


>gb|ABY61026.1| zinc finger-homeodomain protein 1, partial [Liriodendron
           tulipifera]
          Length = 164

 Score =  197 bits (501), Expect = 2e-48
 Identities = 104/178 (58%), Positives = 122/178 (68%)
 Frame = -2

Query: 661 DRDDSNELYKECLRNHAASLGSFATDGCGEFTLDYTVPDMLKCAACGCHRNFHRKVIVTM 482
           + +  NE Y+ECLRNHAA+LGS+ATDGCGEFT D +    L CAACGCHRNFHRKV +T 
Sbjct: 3   ESNSPNETYRECLRNHAATLGSYATDGCGEFTPDESRAGGLTCAACGCHRNFHRKVHLT- 61

Query: 481 STGACRRDGMGSSFLGRDTDVVELLEYGAGHSNESERSGKKRVRTKFSEEQKEKMLAFAE 302
                R D        RD+ V +          +S+R+ KKR RTKFS EQKEKM  FAE
Sbjct: 62  ----ARTDSPLFVAFARDSSVEQ---------PDSDRTAKKRSRTKFSAEQKEKMTRFAE 108

Query: 301 KLGWRIKRKDGEEDEIERFCRSVGVSRQVFKVWMHNHKNSSSSPSFHHITGNVSSLTQ 128
            +GWRI+R+DG+ DEI RFC  +GVSRQVFKVWMHNHKNS+SS S     GN SSLTQ
Sbjct: 109 TIGWRIQRRDGDVDEIARFCSEIGVSRQVFKVWMHNHKNSASSSS--STGGNASSLTQ 164


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