BLASTX nr result

ID: Coptis23_contig00026604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026604
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002451753.1| hypothetical protein SORBIDRAFT_04g007260 [S...   116   9e-31
ref|XP_002514351.1| ATP-binding cassette transporter, putative [...   115   3e-30
gb|AFW66091.1| hypothetical protein ZEAMMB73_361265 [Zea mays]        114   5e-30
ref|XP_002451754.1| hypothetical protein SORBIDRAFT_04g007270 [S...   115   5e-30
emb|CAN74185.1| hypothetical protein VITISV_001190 [Vitis vinifera]   117   1e-29

>ref|XP_002451753.1| hypothetical protein SORBIDRAFT_04g007260 [Sorghum bicolor]
            gi|241931584|gb|EES04729.1| hypothetical protein
            SORBIDRAFT_04g007260 [Sorghum bicolor]
          Length = 1442

 Score =  116 bits (291), Expect(2) = 9e-31
 Identities = 51/68 (75%), Positives = 58/68 (85%)
 Frame = +1

Query: 79   RNKLLIKELSVPPPSSKDLYFSTQYSQPILTQCMACLWKQHLSYWRDPAYTAVQIFFTIV 258
            RNK LI ELS PPP SKDLYF TQYSQ  LTQCMACLWKQH+SYWR+P+YTA +IFFT V
Sbjct: 1139 RNKALISELSTPPPGSKDLYFPTQYSQSFLTQCMACLWKQHMSYWRNPSYTATRIFFTTV 1198

Query: 259  VTLMFGSI 282
            + L+FG+I
Sbjct: 1199 IALIFGTI 1206



 Score = 42.0 bits (97), Expect(2) = 9e-31
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = +2

Query: 5    TWMLEVTTAAQEENLGIRFAEIYK 76
            TWMLEVTT AQE+ LGI FAE+Y+
Sbjct: 1109 TWMLEVTTLAQEDILGINFAEVYR 1132


>ref|XP_002514351.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223546807|gb|EEF48305.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1438

 Score =  115 bits (287), Expect(2) = 3e-30
 Identities = 51/68 (75%), Positives = 57/68 (83%)
 Frame = +1

Query: 79   RNKLLIKELSVPPPSSKDLYFSTQYSQPILTQCMACLWKQHLSYWRDPAYTAVQIFFTIV 258
            +NK LIKELS P P SKDLYF TQYSQP LTQCMACLWKQH SYWR+P YTAV++ FT V
Sbjct: 1136 KNKALIKELSTPQPGSKDLYFPTQYSQPFLTQCMACLWKQHWSYWRNPPYTAVKLLFTTV 1195

Query: 259  VTLMFGSI 282
            + LMFG+I
Sbjct: 1196 IALMFGTI 1203



 Score = 41.6 bits (96), Expect(2) = 3e-30
 Identities = 18/25 (72%), Positives = 22/25 (88%)
 Frame = +2

Query: 2    TTWMLEVTTAAQEENLGIRFAEIYK 76
            +TWMLE+T+AAQE  LGI FA+IYK
Sbjct: 1105 STWMLEITSAAQEAVLGINFADIYK 1129


>gb|AFW66091.1| hypothetical protein ZEAMMB73_361265 [Zea mays]
          Length = 1443

 Score =  114 bits (284), Expect(2) = 5e-30
 Identities = 51/68 (75%), Positives = 57/68 (83%)
 Frame = +1

Query: 79   RNKLLIKELSVPPPSSKDLYFSTQYSQPILTQCMACLWKQHLSYWRDPAYTAVQIFFTIV 258
            RNK LI ELS PPP SKDLYF TQYSQ  LTQCMACLWKQH SYWR+P+YTA +IFFT V
Sbjct: 1139 RNKDLISELSTPPPGSKDLYFPTQYSQSFLTQCMACLWKQHKSYWRNPSYTATRIFFTTV 1198

Query: 259  VTLMFGSI 282
            + L+FG+I
Sbjct: 1199 IALIFGTI 1206



 Score = 42.0 bits (97), Expect(2) = 5e-30
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = +2

Query: 5    TWMLEVTTAAQEENLGIRFAEIYK 76
            TWMLEVTT AQE+ LGI FAE+Y+
Sbjct: 1109 TWMLEVTTLAQEDILGINFAEVYR 1132


>ref|XP_002451754.1| hypothetical protein SORBIDRAFT_04g007270 [Sorghum bicolor]
            gi|241931585|gb|EES04730.1| hypothetical protein
            SORBIDRAFT_04g007270 [Sorghum bicolor]
          Length = 1440

 Score =  115 bits (287), Expect(2) = 5e-30
 Identities = 50/68 (73%), Positives = 58/68 (85%)
 Frame = +1

Query: 79   RNKLLIKELSVPPPSSKDLYFSTQYSQPILTQCMACLWKQHLSYWRDPAYTAVQIFFTIV 258
            RNK LI ELS+PPP S+DLYF TQYSQ  LTQCMACLWKQH SYWR+P+YTA +IFFT V
Sbjct: 1137 RNKALISELSIPPPGSRDLYFPTQYSQSFLTQCMACLWKQHKSYWRNPSYTATRIFFTTV 1196

Query: 259  VTLMFGSI 282
            + L+FG+I
Sbjct: 1197 IALIFGTI 1204



 Score = 40.8 bits (94), Expect(2) = 5e-30
 Identities = 17/24 (70%), Positives = 21/24 (87%)
 Frame = +2

Query: 5    TWMLEVTTAAQEENLGIRFAEIYK 76
            TWMLEVTT +QE+ LGI FAE+Y+
Sbjct: 1107 TWMLEVTTLSQEDILGINFAEVYR 1130


>emb|CAN74185.1| hypothetical protein VITISV_001190 [Vitis vinifera]
          Length = 1414

 Score =  117 bits (292), Expect(2) = 1e-29
 Identities = 52/68 (76%), Positives = 58/68 (85%)
 Frame = +1

Query: 79   RNKLLIKELSVPPPSSKDLYFSTQYSQPILTQCMACLWKQHLSYWRDPAYTAVQIFFTIV 258
            RNK LIKELS PPP SKDLYFSTQYSQ   TQC+ACLWKQH SYWR+PAYTAV++FFT  
Sbjct: 1130 RNKALIKELSSPPPGSKDLYFSTQYSQSFFTQCLACLWKQHWSYWRNPAYTAVRLFFTTF 1189

Query: 259  VTLMFGSI 282
            + LMFG+I
Sbjct: 1190 IALMFGTI 1197



 Score = 37.7 bits (86), Expect(2) = 1e-29
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +2

Query: 2    TTWMLEVTTAAQEENLGIRFAEIYK 76
            +TWMLE+T+AAQE  LG+ F E YK
Sbjct: 1099 STWMLELTSAAQEAALGVNFTEEYK 1123


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