BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026591
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]              155   7e-36
gb|AFB73911.1| polyprotein [Citrus sinensis]                          154   1e-35
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              154   1e-35
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                  153   3e-35
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                             152   5e-35

>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  155 bits (392), Expect = 7e-36
 Identities = 89/241 (36%), Positives = 145/241 (60%), Gaps = 8/241 (3%)
 Frame = -1

Query: 702  KLSAPGKKCIFIRYSETSKGYVFLGEDTQGHVTEIEARNVRFLEDQYPMRGEVD---KDI 532
            KL    +KCIF+ Y++  KGY  L + T   V  + +R+V F E++     + D   K+ 
Sbjct: 666  KLDPKSRKCIFLGYADNVKGYR-LWDPTARKV--VVSRDVVFAENELQSEQKNDSTFKET 722

Query: 531  QLYEVDNLITADEQGEDETFIN---PDSSDNGIGQLIDQSQPRKSVRGHIPKRRFEIEGE 361
             + +++      +  E E+      PD  +NG+ +   Q+Q          K  ++ +  
Sbjct: 723  AILQIEEKSKESDSSEAESVHEEQEPDDVNNGVRRSTRQTQ----------KPSWQSDYV 772

Query: 360  INMTNALTEISDE--PKTFKEAISGSNTSKWMEAMKEELESMKKNKVWDLVDLPPNRRSI 187
            +   +A   I++E  P TF EA++GS+ S+WM A+ EE+E+++KNK W+LV+LP  R++I
Sbjct: 773  MTGHDAYCLIAEEGEPSTFHEALNGSDASQWMTAIHEEMEALRKNKTWELVELPKGRKAI 832

Query: 186  GNRWVLKIKKNAEGNIDKFKARLVAKGYTQKEGIDYEDTFSPVVRFASIRLLLSMVAHLD 7
            GN+WV KIK++    +++++ARLV KGY QKEGID+ + FSPVVR  +IR++L+M A LD
Sbjct: 833  GNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALD 892

Query: 6    L 4
            L
Sbjct: 893  L 893


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  154 bits (390), Expect = 1e-35
 Identities = 89/238 (37%), Positives = 137/238 (57%), Gaps = 5/238 (2%)
 Frame = -1

Query: 702  KLSAPGKKCIFIRYSETSKGYVFLGEDTQGHVTEIEARNVRFLEDQYPMRGEVDKDIQLY 523
            KL A  ++CIF+ Y++  KGY     D   H   I +R+V F+EDQ   +   D  ++  
Sbjct: 666  KLDAKSRRCIFLGYADGVKGYRLW--DPTAHKIVI-SRDVIFVEDQLQRKDGDDGTVKEK 722

Query: 522  E--VDNLITADEQGEDETFINPDSSDNGIGQLIDQSQP--RKSVRGHIPKR-RFEIEGEI 358
               V   +  + +  D +   P+  +    + ++   P  R+S R   P     E   EI
Sbjct: 723  SETVPVYVENNPENSDSSEAAPEHEEQ---EPVESEAPEVRRSTRERRPPTWHSEYVTEI 779

Query: 357  NMTNALTEISDEPKTFKEAISGSNTSKWMEAMKEELESMKKNKVWDLVDLPPNRRSIGNR 178
            N+   L     EP TF EA++ S+ + WM AM+EE+E++ KNK W+LV LP  R++IGN+
Sbjct: 780  NVAYCLLTEDGEPSTFHEALNSSDVALWMTAMQEEIEALHKNKTWELVPLPRGRKAIGNK 839

Query: 177  WVLKIKKNAEGNIDKFKARLVAKGYTQKEGIDYEDTFSPVVRFASIRLLLSMVAHLDL 4
            WV KIK++    +++++ARLV KGY QKEGID+ + FSPVVR  ++R++L+M A  DL
Sbjct: 840  WVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRIVLAMCATFDL 897


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  154 bits (390), Expect = 1e-35
 Identities = 89/241 (36%), Positives = 144/241 (59%), Gaps = 8/241 (3%)
 Frame = -1

Query: 702  KLSAPGKKCIFIRYSETSKGYVFLGEDTQGHVTEIEARNVRFLEDQYPMRGEVD---KDI 532
            KL    +KCIF+ Y++  KGY  L + T   V  + +R+V F E++   + + D   K+ 
Sbjct: 666  KLDPKSRKCIFLGYADNVKGYR-LWDPTARKV--VVSRDVVFAENELQSKQKNDSTSKET 722

Query: 531  QLYEVDNLITADEQGEDETFIN---PDSSDNGIGQLIDQSQPRKSVRGHIPKRRFEIEGE 361
             + +++      +  E E       PD  +NG+ +   Q+Q          K  ++ +  
Sbjct: 723  AIVQMEEKSKESDSSEAEPVHEEQEPDDVNNGVRRSTRQTQ----------KPSWQSDYV 772

Query: 360  INMTNALTEISDE--PKTFKEAISGSNTSKWMEAMKEELESMKKNKVWDLVDLPPNRRSI 187
            +   +A   I++E  P TF EA++GS+ S+WM AM EE+E++ +NK W+LV+LP  R++I
Sbjct: 773  MTSHDAYCLITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAI 832

Query: 186  GNRWVLKIKKNAEGNIDKFKARLVAKGYTQKEGIDYEDTFSPVVRFASIRLLLSMVAHLD 7
            GN+WV KIK++    +++++ARLV KGY QKEGID+ + FSPVVR  +IR++L+M A LD
Sbjct: 833  GNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALD 892

Query: 6    L 4
            L
Sbjct: 893  L 893


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score =  153 bits (387), Expect = 3e-35
 Identities = 85/235 (36%), Positives = 144/235 (61%), Gaps = 2/235 (0%)
 Frame = -1

Query: 702  KLSAPGKKCIFIRYSETSKGYVFLGEDTQGHVTEIEARNVRFLEDQYPMRGEVDKDIQLY 523
            KL    ++C F+ Y++  KGY  L + T   +    +R+V F+E++  ++ E   D    
Sbjct: 666  KLDPKSRRCTFLGYADNVKGYR-LWDPTARKI--FVSRDVIFVENE--LQKEQKNDGTTK 720

Query: 522  EVDNLITADEQGEDETFINPDSSDNGIGQLIDQSQPRKSVRGHIPKRRFEIEGEINMTNA 343
            E   +   ++ GE+ +   P+  +    ++ D ++PR++ R  I K  +  E  +   +A
Sbjct: 721  ETATVEIEEKSGEENSEAEPEHEEQEPNEVND-AEPRRTTR-QIRKPSWHSEYVMASHDA 778

Query: 342  LTEISD--EPKTFKEAISGSNTSKWMEAMKEELESMKKNKVWDLVDLPPNRRSIGNRWVL 169
               +S+  EP TF EA++GS+ S WM AM+EE+E++ +N  W+LV+LP  R++IGN+WV 
Sbjct: 779  YCLLSEDGEPSTFHEAVNGSDASLWMAAMQEEIEALHRNNTWELVELPKGRKAIGNKWVF 838

Query: 168  KIKKNAEGNIDKFKARLVAKGYTQKEGIDYEDTFSPVVRFASIRLLLSMVAHLDL 4
            KIK++    +++++ARLV KGY QKEGID+ + FSPVVR  +IR++L+M A  +L
Sbjct: 839  KIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRIVLAMCAAFEL 893


>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score =  152 bits (385), Expect = 5e-35
 Identities = 88/240 (36%), Positives = 133/240 (55%), Gaps = 7/240 (2%)
 Frame = -1

Query: 702  KLSAPGKKCIFIRYSETSKGYVFLGEDTQGHVTEIEARNVRFLEDQYPMRGEVDKDIQL- 526
            KL    +KC F+ Y++  KGY     D   H   I +R+V F+ED+   RGEVD   +  
Sbjct: 656  KLDPKSRKCRFLGYADGVKGYRLW--DPTAHKVVI-SRDVIFVEDRL-QRGEVDDSTEKE 711

Query: 525  ------YEVDNLITADEQGEDETFINPDSSDNGIGQLIDQSQPRKSVRGHIPKRRFEIEG 364
                   +V+     D    +     P+   +G        + ++    H     + +EG
Sbjct: 712  KPETTQIQVEEEFEQDSSEAEPAHEEPEPESSGAPTTRQSDREKRRPTWHSD---YVMEG 768

Query: 363  EINMTNALTEISDEPKTFKEAISGSNTSKWMEAMKEELESMKKNKVWDLVDLPPNRRSIG 184
              N+   L     EP TF+EAI+ S+ S+W  AM+EE+E++ KN  WDLV LP  R+ IG
Sbjct: 769  --NVAYCLLTEDGEPSTFQEAINSSDVSQWTAAMQEEIEALHKNNTWDLVPLPQGRKPIG 826

Query: 183  NRWVLKIKKNAEGNIDKFKARLVAKGYTQKEGIDYEDTFSPVVRFASIRLLLSMVAHLDL 4
            N+WV KIK+N +  +++++ARLV KGY QKEGID+ + FSPVVR  ++R++L+M A  +L
Sbjct: 827  NKWVFKIKRNGDDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVVLAMCATFNL 886