BLASTX nr result

ID: Coptis23_contig00026584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026584
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283553.1| PREDICTED: uncharacterized protein LOC100244...    62   6e-08

>ref|XP_002283553.1| PREDICTED: uncharacterized protein LOC100244058 [Vitis vinifera]
          Length = 317

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
 Frame = -2

Query: 386 AEWQPRRK---------FEKLYIQNDXXXXXXXXXVRDIRKVDLLLENLTESDVNTWWDS 234
           AEW+P+            EK+Y+++D           D+R     L+N+TE D  TWWD+
Sbjct: 227 AEWRPQMGKRVSISTGGIEKVYVRDDVTGELTVG---DMRNASSPLQNVTECDGGTWWDA 283

Query: 233 DAVIVDGNQQVCYSGNGCGSVVTRCRNAVFSYLF 132
           DAV+V  +    ++  GC S+V+RC +AV SYLF
Sbjct: 284 DAVMVYKDYVDQWAVKGCESIVSRCCDAVKSYLF 317


Top