BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026564
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18267.3| unnamed protein product [Vitis vinifera]              112   2e-23
ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica...   112   2e-23
ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinu...   101   6e-20
ref|XP_003638250.1| ATP-dependent RNA helicase A-like protein [M...   100   2e-19
ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica...    99   4e-19

>emb|CBI18267.3| unnamed protein product [Vitis vinifera]
          Length = 1162

 Score =  112 bits (281), Expect = 2e-23
 Identities = 51/71 (71%), Positives = 60/71 (84%)
 Frame = -3

Query: 214 STIWLSTSIFSRRSFCGYAVEQFSDDEYECDFDNQKGSSSVANIDEWKWKLSLLSRSEQD 35
           S++   +S   RR  CGYA EQFSDDEY+CDF++ K SSSVANIDEWKWKLSLLSR+EQD
Sbjct: 28  SSLPTPSSFIRRRGLCGYAAEQFSDDEYDCDFESHKASSSVANIDEWKWKLSLLSRNEQD 87

Query: 34  QEIISRDKRDR 2
           QEI+SRDK+DR
Sbjct: 88  QEIVSRDKKDR 98


>ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis
           vinifera]
          Length = 1136

 Score =  112 bits (281), Expect = 2e-23
 Identities = 51/71 (71%), Positives = 60/71 (84%)
 Frame = -3

Query: 214 STIWLSTSIFSRRSFCGYAVEQFSDDEYECDFDNQKGSSSVANIDEWKWKLSLLSRSEQD 35
           S++   +S   RR  CGYA EQFSDDEY+CDF++ K SSSVANIDEWKWKLSLLSR+EQD
Sbjct: 28  SSLPTPSSFIRRRGLCGYAAEQFSDDEYDCDFESHKASSSVANIDEWKWKLSLLSRNEQD 87

Query: 34  QEIISRDKRDR 2
           QEI+SRDK+DR
Sbjct: 88  QEIVSRDKKDR 98


>ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223546447|gb|EEF47947.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1129

 Score =  101 bits (252), Expect = 6e-20
 Identities = 47/66 (71%), Positives = 52/66 (78%)
 Frame = -3

Query: 199 STSIFSRRSFCGYAVEQFSDDEYECDFDNQKGSSSVANIDEWKWKLSLLSRSEQDQEIIS 20
           S   F RR F  YA EQFSDD+YECDF   K SSSV+NIDEWKWKLSLL RSE DQEI+S
Sbjct: 29  SALFFIRRPFSSYAAEQFSDDDYECDFGTHKASSSVSNIDEWKWKLSLLLRSETDQEIVS 88

Query: 19  RDKRDR 2
           RD++DR
Sbjct: 89  RDRKDR 94


>ref|XP_003638250.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
           gi|355504185|gb|AES85388.1| ATP-dependent RNA helicase
           A-like protein [Medicago truncatula]
          Length = 279

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
 Frame = -3

Query: 199 STSIFSRRSFCGYA-VEQFSDDEYECDFDNQKGSSSVANIDEWKWKLSLLSRSEQDQEII 23
           S    S R F GY  VEQFSDDEYECDF+N + SS+VAN+DEWKWKLS+L R+E+DQEI+
Sbjct: 43  SKPFISTRFFSGYYNVEQFSDDEYECDFENHQASSTVANVDEWKWKLSMLLRNEKDQEIV 102

Query: 22  SRDKRDR 2
           SRDKRDR
Sbjct: 103 SRDKRDR 109


>ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1161

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/74 (62%), Positives = 61/74 (82%), Gaps = 6/74 (8%)
 Frame = -3

Query: 205 WLST-----SIFSRRSFCGY-AVEQFSDDEYECDFDNQKGSSSVANIDEWKWKLSLLSRS 44
           WLS+     S+ + R F  Y ++EQFSDDEY+CDF+NQ+ SS+VAN+DEWKWKLS+L RS
Sbjct: 50  WLSSLCNAKSLITTRLFSSYYSLEQFSDDEYDCDFENQQASSTVANVDEWKWKLSMLLRS 109

Query: 43  EQDQEIISRDKRDR 2
           E+DQEI+SRD++DR
Sbjct: 110 EKDQEIVSRDRKDR 123