BLASTX nr result

ID: Coptis23_contig00026546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026546
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554777.1| PREDICTED: uncharacterized protein LOC100798...   177   8e-43
gb|ACU19357.1| unknown [Glycine max]                                  177   1e-42
ref|XP_004133799.1| PREDICTED: uncharacterized protein LOC101206...   176   2e-42
ref|XP_002533330.1| conserved hypothetical protein [Ricinus comm...   174   9e-42
ref|XP_002262754.1| PREDICTED: uncharacterized protein LOC100250...   173   1e-41

>ref|XP_003554777.1| PREDICTED: uncharacterized protein LOC100798854 [Glycine max]
          Length = 277

 Score =  177 bits (449), Expect = 8e-43
 Identities = 85/110 (77%), Positives = 92/110 (83%)
 Frame = -2

Query: 449 KELLKGSFKDRHFNAGSILLGFGVLESVGGGVNTYIRTGKLFPGPHLYXXXXXXXXXXXX 270
           KEL+KGS+KDRHFNAGSILLGFGVLESVGGGVNT+ RTGKLFPGPHL+            
Sbjct: 168 KELIKGSYKDRHFNAGSILLGFGVLESVGGGVNTWFRTGKLFPGPHLFAGAAITALWALA 227

Query: 269 XALVPQMQKGNETARNLHIALNVLNVSLFIWQIPTGLDIVLKVFEFTTWP 120
            ALVP MQKGNETARNLHIALN +NV LF+WQIPTG+DIV KVFEFTTWP
Sbjct: 228 AALVPSMQKGNETARNLHIALNAVNVLLFVWQIPTGIDIVFKVFEFTTWP 277


>gb|ACU19357.1| unknown [Glycine max]
          Length = 272

 Score =  177 bits (448), Expect = 1e-42
 Identities = 84/110 (76%), Positives = 92/110 (83%)
 Frame = -2

Query: 449 KELLKGSFKDRHFNAGSILLGFGVLESVGGGVNTYIRTGKLFPGPHLYXXXXXXXXXXXX 270
           KEL+KGS+KDRHFNAGSILLGFGVLES+GGGVNT+ RTGKLFPGPHL+            
Sbjct: 163 KELIKGSYKDRHFNAGSILLGFGVLESIGGGVNTWFRTGKLFPGPHLFAGAAITVLWALA 222

Query: 269 XALVPQMQKGNETARNLHIALNVLNVSLFIWQIPTGLDIVLKVFEFTTWP 120
            ALVP MQKGNETARNLHIALN +NV LF+WQIPTG+DIV KVFEFTTWP
Sbjct: 223 AALVPSMQKGNETARNLHIALNAVNVLLFVWQIPTGIDIVFKVFEFTTWP 272


>ref|XP_004133799.1| PREDICTED: uncharacterized protein LOC101206421 [Cucumis sativus]
           gi|449477966|ref|XP_004155178.1| PREDICTED:
           uncharacterized LOC101206421 [Cucumis sativus]
          Length = 268

 Score =  176 bits (446), Expect = 2e-42
 Identities = 85/110 (77%), Positives = 92/110 (83%)
 Frame = -2

Query: 449 KELLKGSFKDRHFNAGSILLGFGVLESVGGGVNTYIRTGKLFPGPHLYXXXXXXXXXXXX 270
           KEL+KGSF+DRHFNAGSILLGFGVLE++GGGVNT+ RTGKLFPGPHL+            
Sbjct: 159 KELIKGSFRDRHFNAGSILLGFGVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALA 218

Query: 269 XALVPQMQKGNETARNLHIALNVLNVSLFIWQIPTGLDIVLKVFEFTTWP 120
            ALVP MQKGNETARNLHIALN LNV LFIWQIPTG+DIVLKVFEFT WP
Sbjct: 219 AALVPAMQKGNETARNLHIALNTLNVLLFIWQIPTGIDIVLKVFEFTKWP 268


>ref|XP_002533330.1| conserved hypothetical protein [Ricinus communis]
           gi|223526835|gb|EEF29051.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 270

 Score =  174 bits (440), Expect = 9e-42
 Identities = 84/110 (76%), Positives = 91/110 (82%)
 Frame = -2

Query: 449 KELLKGSFKDRHFNAGSILLGFGVLESVGGGVNTYIRTGKLFPGPHLYXXXXXXXXXXXX 270
           KEL+KGS+KDRHFNAGSILLGFGVLES+GGG+NT+ RTGKLFPGPHL+            
Sbjct: 161 KELIKGSYKDRHFNAGSILLGFGVLESIGGGLNTWFRTGKLFPGPHLFAGAGITVLWAAA 220

Query: 269 XALVPQMQKGNETARNLHIALNVLNVSLFIWQIPTGLDIVLKVFEFTTWP 120
            ALVP MQKGNETARNLHIALN LNV LFIWQIPTG +IVLKVFEFT WP
Sbjct: 221 AALVPAMQKGNETARNLHIALNALNVLLFIWQIPTGFEIVLKVFEFTKWP 270


>ref|XP_002262754.1| PREDICTED: uncharacterized protein LOC100250645 [Vitis vinifera]
           gi|296088978|emb|CBI38681.3| unnamed protein product
           [Vitis vinifera]
          Length = 273

 Score =  173 bits (439), Expect = 1e-41
 Identities = 84/110 (76%), Positives = 90/110 (81%)
 Frame = -2

Query: 449 KELLKGSFKDRHFNAGSILLGFGVLESVGGGVNTYIRTGKLFPGPHLYXXXXXXXXXXXX 270
           KEL+KGSF+DRHFNAGSILLGFGV ES+GGGVNT+ RTGKLFPGPHL+            
Sbjct: 164 KELIKGSFRDRHFNAGSILLGFGVFESIGGGVNTWFRTGKLFPGPHLFAGAAITALWAAA 223

Query: 269 XALVPQMQKGNETARNLHIALNVLNVSLFIWQIPTGLDIVLKVFEFTTWP 120
            ALVP MQKGNETARNLHIALN LNV LFIWQIPTG+DIV KVFEFT WP
Sbjct: 224 AALVPAMQKGNETARNLHIALNGLNVLLFIWQIPTGIDIVFKVFEFTNWP 273


Top