BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026540
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM11099.1| ABC protein [Coptis japonica]                          77   1e-12
dbj|BAM11098.1| ABC protein [Coptis japonica]                          76   3e-12
ref|NP_191774.2| ABC transporter B family member 21 [Arabidopsis...    69   3e-10
ref|XP_002876661.1| P-glycoprotein 21 [Arabidopsis lyrata subsp....    69   3e-10
emb|CAB71875.1| P-glycoprotein-like proetin [Arabidopsis thaliana]     69   3e-10

>dbj|BAM11099.1| ABC protein [Coptis japonica]
          Length = 1288

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/74 (56%), Positives = 46/74 (62%)
 Frame = -2

Query: 224  TVASFCAEEKVITLYKNKCEGPRSAGIKLXXXXXXXXXXXXXXXXXXXXXXXYVGSRLVE 45
            TVASFCAEEKVITLYK+KC+ PRS  IKL                       YVGSRLVE
Sbjct: 917  TVASFCAEEKVITLYKSKCQRPRSTAIKLGVMSGIDYGISFFLLFAFYAISFYVGSRLVE 976

Query: 44   DGKTTFARVFRVFF 3
            DGKT F+ +FRVFF
Sbjct: 977  DGKTGFSNIFRVFF 990


>dbj|BAM11098.1| ABC protein [Coptis japonica]
          Length = 1292

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 41/74 (55%), Positives = 44/74 (59%)
 Frame = -2

Query: 224  TVASFCAEEKVITLYKNKCEGPRSAGIKLXXXXXXXXXXXXXXXXXXXXXXXYVGSRLVE 45
            TVASFCAEEKV+ LYK KCEGP   GI+                        YVG+RLVE
Sbjct: 920  TVASFCAEEKVMQLYKKKCEGPMKTGIRQGLISGIGFGVSFFLLYNVYATSFYVGARLVE 979

Query: 44   DGKTTFARVFRVFF 3
            DGKTTFA VFRVFF
Sbjct: 980  DGKTTFAEVFRVFF 993


>ref|NP_191774.2| ABC transporter B family member 21 [Arabidopsis thaliana]
            gi|374095360|sp|Q9M1Q9.2|AB21B_ARATH RecName: Full=ABC
            transporter B family member 21; Short=ABC transporter
            ABCB.21; Short=AtABCB21; AltName: Full=Multidrug
            resistance protein 17; AltName: Full=P-glycoprotein 21
            gi|332646795|gb|AEE80316.1| ABC transporter B family
            member 21 [Arabidopsis thaliana]
          Length = 1296

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/74 (50%), Positives = 42/74 (56%)
 Frame = -2

Query: 224  TVASFCAEEKVITLYKNKCEGPRSAGIKLXXXXXXXXXXXXXXXXXXXXXXXYVGSRLVE 45
            TVASFCAEEKV+ +YK KCEGP   GI+                        Y G+RLV+
Sbjct: 923  TVASFCAEEKVMKMYKKKCEGPMRTGIRQGIVSGIGFGVSFFVLFSSYAASFYAGARLVD 982

Query: 44   DGKTTFARVFRVFF 3
            DGKTTF  VFRVFF
Sbjct: 983  DGKTTFDSVFRVFF 996


>ref|XP_002876661.1| P-glycoprotein 21 [Arabidopsis lyrata subsp. lyrata]
            gi|297322499|gb|EFH52920.1| P-glycoprotein 21
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1289

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/74 (50%), Positives = 42/74 (56%)
 Frame = -2

Query: 224  TVASFCAEEKVITLYKNKCEGPRSAGIKLXXXXXXXXXXXXXXXXXXXXXXXYVGSRLVE 45
            TVASFCAEEKV+ +YK KCEGP   GI+                        Y G+RLV+
Sbjct: 916  TVASFCAEEKVMKMYKKKCEGPMRTGIRQGIVSGIGFGVSFFVLFSSYAASFYAGARLVD 975

Query: 44   DGKTTFARVFRVFF 3
            DGKTTF  VFRVFF
Sbjct: 976  DGKTTFDSVFRVFF 989


>emb|CAB71875.1| P-glycoprotein-like proetin [Arabidopsis thaliana]
          Length = 1292

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/74 (50%), Positives = 42/74 (56%)
 Frame = -2

Query: 224  TVASFCAEEKVITLYKNKCEGPRSAGIKLXXXXXXXXXXXXXXXXXXXXXXXYVGSRLVE 45
            TVASFCAEEKV+ +YK KCEGP   GI+                        Y G+RLV+
Sbjct: 919  TVASFCAEEKVMKMYKKKCEGPMRTGIRQGIVSGIGFGVSFFVLFSSYAASFYAGARLVD 978

Query: 44   DGKTTFARVFRVFF 3
            DGKTTF  VFRVFF
Sbjct: 979  DGKTTFDSVFRVFF 992