BLASTX nr result

ID: Coptis23_contig00026531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026531
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269539.2| PREDICTED: ABC transporter B family member 1...   229   2e-58
ref|XP_002515660.1| multidrug resistance protein 1, 2, putative ...   213   2e-53
ref|XP_004151914.1| PREDICTED: ABC transporter B family member 1...   211   6e-53
ref|XP_002321339.1| multidrug/pheromone exporter, MDR family, AB...   201   8e-50
ref|XP_003602445.1| ABC transporter ATP-binding protein/permease...   196   2e-48

>ref|XP_002269539.2| PREDICTED: ABC transporter B family member 19-like [Vitis vinifera]
          Length = 1252

 Score =  229 bits (585), Expect = 2e-58
 Identities = 116/172 (67%), Positives = 140/172 (81%)
 Frame = -1

Query: 516  EPINIGHEPATQDNEQAGESIGDNQLRDSPIEEIQKYKSQTVSFFRIWFGLNEAELGKTA 337
            E  +   E + QD +Q+ E   +   RD+  EE Q+ + + V FFRIWFGL ++EL KTA
Sbjct: 626  ENASTDQEISFQDLDQSEEP--NKHPRDALKEEEQRVRGKRVQFFRIWFGLKKSELIKTA 683

Query: 336  IGSFAAALSGISKPFFGFFIITIGVAYYKPDAKQKVGLYSAIFCIIGLLSLVTHTLQHYF 157
            IGSFAAALSGISKPFFG+FIITIGVAYYK DAKQ+VGLYS +F +IGLLSL THTLQHYF
Sbjct: 684  IGSFAAALSGISKPFFGYFIITIGVAYYKEDAKQRVGLYSILFSLIGLLSLFTHTLQHYF 743

Query: 156  YGIVGEKAMTNLRKALYSAVLKNELAWFEKPENSVGTLTSHIISDTSLIKTI 1
            +G++GEKAMTNLR+ALYS +L NELAWFEKPEN+VG+LTS II+DTS +KTI
Sbjct: 744  FGVIGEKAMTNLRQALYSGILNNELAWFEKPENNVGSLTSRIINDTSTVKTI 795


>ref|XP_002515660.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
            gi|223545203|gb|EEF46712.1| multidrug resistance protein
            1, 2, putative [Ricinus communis]
          Length = 1289

 Score =  213 bits (541), Expect = 2e-53
 Identities = 105/147 (71%), Positives = 123/147 (83%)
 Frame = -1

Query: 441  LRDSPIEEIQKYKSQTVSFFRIWFGLNEAELGKTAIGSFAAALSGISKPFFGFFIITIGV 262
            +  SP +E QK   ++  FFRIWFGL + EL +TAIGSFAAA SGISKP FGFFIIT+GV
Sbjct: 685  MSQSPKQEEQKDIRKSAIFFRIWFGLQKKELLRTAIGSFAAAFSGISKPVFGFFIITVGV 744

Query: 261  AYYKPDAKQKVGLYSAIFCIIGLLSLVTHTLQHYFYGIVGEKAMTNLRKALYSAVLKNEL 82
            AYYK DAK++VGLYS IF +IGLLSL THTLQHYF+G+VGEKAM NLR+ALYS VL NE+
Sbjct: 745  AYYKKDAKRQVGLYSIIFALIGLLSLFTHTLQHYFFGVVGEKAMINLRQALYSGVLHNEI 804

Query: 81   AWFEKPENSVGTLTSHIISDTSLIKTI 1
            AWFEKPENSVG+LTS II  T+++KTI
Sbjct: 805  AWFEKPENSVGSLTSRIIHATAMVKTI 831


>ref|XP_004151914.1| PREDICTED: ABC transporter B family member 19-like [Cucumis sativus]
          Length = 1244

 Score =  211 bits (537), Expect = 6e-53
 Identities = 108/179 (60%), Positives = 138/179 (77%)
 Frame = -1

Query: 537  DRDSTRGEPINIGHEPATQDNEQAGESIGDNQLRDSPIEEIQKYKSQTVSFFRIWFGLNE 358
            +  ++  EP +   E  + D +Q  +   +N   DS  +E +K K + + FFRIWFGL++
Sbjct: 613  NNSNSLSEPGSTHQEAQSSDLDQDEKPELENSKIDSMSQEEEKVKVKEM-FFRIWFGLSK 671

Query: 357  AELGKTAIGSFAAALSGISKPFFGFFIITIGVAYYKPDAKQKVGLYSAIFCIIGLLSLVT 178
             E+ KT+ GS AAALSGISKP FGFFIITIGVAYYK +AKQKVGLYS IF ++GLLSL T
Sbjct: 672  IEIMKTSFGSLAAALSGISKPIFGFFIITIGVAYYKKNAKQKVGLYSLIFSLLGLLSLFT 731

Query: 177  HTLQHYFYGIVGEKAMTNLRKALYSAVLKNELAWFEKPENSVGTLTSHIISDTSLIKTI 1
            HTLQHYF+G+VGEKAM NLR+ALYS VL+NE+AWF+KPEN+VG LTS I++ TS+IKT+
Sbjct: 732  HTLQHYFFGVVGEKAMRNLREALYSVVLRNEVAWFDKPENNVGLLTSKIMNTTSVIKTV 790


>ref|XP_002321339.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222868335|gb|EEF05466.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1275

 Score =  201 bits (510), Expect = 8e-50
 Identities = 100/159 (62%), Positives = 122/159 (76%)
 Frame = -1

Query: 477  NEQAGESIGDNQLRDSPIEEIQKYKSQTVSFFRIWFGLNEAELGKTAIGSFAAALSGISK 298
            +E+ GE   +  L   P++E QK + +   FFRIWFGL   +L KT +GS AAA SGISK
Sbjct: 661  HEERGEP--NKHLCKPPLQEDQKGRKEASPFFRIWFGLEHKDLVKTVVGSVAAAFSGISK 718

Query: 297  PFFGFFIITIGVAYYKPDAKQKVGLYSAIFCIIGLLSLVTHTLQHYFYGIVGEKAMTNLR 118
            PFFG+FIIT+GV YYK DA ++V  +S +F +IGLLSL THTLQHYF+G VGEKAM NLR
Sbjct: 719  PFFGYFIITVGVTYYKEDANRRVVWFSIMFALIGLLSLFTHTLQHYFFGAVGEKAMANLR 778

Query: 117  KALYSAVLKNELAWFEKPENSVGTLTSHIISDTSLIKTI 1
            +ALYS VL NELAWFEKPEN+VG+LTS II+DTS +K I
Sbjct: 779  QALYSGVLLNELAWFEKPENTVGSLTSRIINDTSKVKII 817


>ref|XP_003602445.1| ABC transporter ATP-binding protein/permease [Medicago truncatula]
            gi|355491493|gb|AES72696.1| ABC transporter ATP-binding
            protein/permease [Medicago truncatula]
          Length = 1342

 Score =  196 bits (498), Expect = 2e-48
 Identities = 94/129 (72%), Positives = 111/129 (86%)
 Frame = -1

Query: 387  FFRIWFGLNEAELGKTAIGSFAAALSGISKPFFGFFIITIGVAYYKPDAKQKVGLYSAIF 208
            FFRIW+ L + EL K AIGSFAAA SGISKPFFGF+IITIGVAY++ DAK+KVGL+SAIF
Sbjct: 755  FFRIWYDLKKKELVKIAIGSFAAAFSGISKPFFGFYIITIGVAYFQDDAKRKVGLFSAIF 814

Query: 207  CIIGLLSLVTHTLQHYFYGIVGEKAMTNLRKALYSAVLKNELAWFEKPENSVGTLTSHII 28
              IGLLSL +HT QHYF+G+VGEKAM N R+ALYS VL NE+ WF+KPEN+VG+LTS II
Sbjct: 815  SAIGLLSLFSHTFQHYFFGVVGEKAMANFRRALYSGVLCNEVGWFDKPENTVGSLTSRII 874

Query: 27   SDTSLIKTI 1
            SDTS++K I
Sbjct: 875  SDTSMVKII 883


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