BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00026514
         (1288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312025.1| predicted protein [Populus trichocarpa] gi|2...   317   4e-84
ref|XP_003556222.1| PREDICTED: RNA pseudourine synthase 5-like [...   311   3e-82
ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatul...   308   2e-81
ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [...   303   5e-80
ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [...   302   1e-79

>ref|XP_002312025.1| predicted protein [Populus trichocarpa] gi|222851845|gb|EEE89392.1|
            predicted protein [Populus trichocarpa]
          Length = 377

 Score =  317 bits (812), Expect = 4e-84
 Identities = 155/228 (67%), Positives = 187/228 (82%), Gaps = 1/228 (0%)
 Frame = -3

Query: 1271 NGALCGRDSNPVPVHRLGRGTSGILLCAKTKLAKVRLAAYFADGTSVVEDKRITNLELNT 1092
            + +L  + S+PVPVHRLGRGTSGILLCAKTK+AK  LAAYFADGTS++ D    N+E + 
Sbjct: 146  SSSLAIQGSHPVPVHRLGRGTSGILLCAKTKVAKTSLAAYFADGTSLIGDSSNANMEQSK 205

Query: 1091 TRKILKIYRALVTGIIEENQVVISQPIGVIRYPGVANGLYVALSSGKPALSKVKVLERNV 912
             RKI KIYRALV GI+ +++++I QPIG +RYPGVA GLYVA  SGKPALSKV+VLER+ 
Sbjct: 206  RRKISKIYRALVNGILNQDKIIIKQPIGTMRYPGVAKGLYVASPSGKPALSKVEVLERDS 265

Query: 911  EENHSLVQVEIQTGRPHQIRIHLSFLGHPLLGDPLYVTGGHPNCFDFESSISSCAQDGGY 732
            + N +LVQVEI++GRPHQIRIHLSF+GHPLLGDPLY  GG P CFD E    S A+DGGY
Sbjct: 266  QLNQTLVQVEIESGRPHQIRIHLSFIGHPLLGDPLYDVGGQPMCFDSEHEDESFAEDGGY 325

Query: 731  QRPMKPVPGDCGYYLNAYRLVLDHPTTNE-ALEITAPLPSILKTQEES 591
            +RP KPVPGDCGYYL+A++LVL HPT NE  ++ITAPLPSIL+TQ E+
Sbjct: 326  ERPAKPVPGDCGYYLHAHQLVLSHPTKNEQVIKITAPLPSILRTQAET 373


>ref|XP_003556222.1| PREDICTED: RNA pseudourine synthase 5-like [Glycine max]
          Length = 371

 Score =  311 bits (796), Expect = 3e-82
 Identities = 152/219 (69%), Positives = 180/219 (82%)
 Frame = -3

Query: 1244 NPVPVHRLGRGTSGILLCAKTKLAKVRLAAYFADGTSVVEDKRITNLELNTTRKILKIYR 1065
            +PVPVHRLGRGTSGILLCAKTKLA+ RLA++FADGTS V  KR T  EL    KI K+YR
Sbjct: 147  HPVPVHRLGRGTSGILLCAKTKLARARLASHFADGTSHVGGKRDTKQELG---KIAKMYR 203

Query: 1064 ALVTGIIEENQVVISQPIGVIRYPGVANGLYVALSSGKPALSKVKVLERNVEENHSLVQV 885
            ALV+GI+E ++V I+QPIG+++YPGVA GLYVA  SGKPALS V +LE N++EN +LVQV
Sbjct: 204  ALVSGIVENDKVTINQPIGIVKYPGVAKGLYVASESGKPALSVVDILETNIQENSTLVQV 263

Query: 884  EIQTGRPHQIRIHLSFLGHPLLGDPLYVTGGHPNCFDFESSISSCAQDGGYQRPMKPVPG 705
            +IQ+GRPHQIRIHLSF+GHPLLGDPLY  GG P C D +    S A+DGGYQRP KPVPG
Sbjct: 264  KIQSGRPHQIRIHLSFIGHPLLGDPLYGVGGQPKCLDCDFVDESFAEDGGYQRPTKPVPG 323

Query: 704  DCGYYLNAYRLVLDHPTTNEALEITAPLPSILKTQEESR 588
            DCGYYL+A++LVL HPTTNE +EI APLPS L T EE++
Sbjct: 324  DCGYYLHAHKLVLSHPTTNELIEIIAPLPSALHTAEEAK 362


>ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatula]
            gi|358349060|ref|XP_003638558.1| RNA pseudourine synthase
            [Medicago truncatula] gi|355481000|gb|AES62203.1| RNA
            pseudourine synthase [Medicago truncatula]
            gi|355504493|gb|AES85696.1| RNA pseudourine synthase
            [Medicago truncatula]
          Length = 371

 Score =  308 bits (789), Expect = 2e-81
 Identities = 155/219 (70%), Positives = 179/219 (81%), Gaps = 1/219 (0%)
 Frame = -3

Query: 1244 NPVPVHRLGRGTSGILLCAKTKLAKVRLAAYFADGTSVVEDKRITNLELNTTRKILKIYR 1065
            +PVPVHRLGRGTSGILLCAKTKLA+ RLA+YFADGTS +E K  TN EL    KI KIYR
Sbjct: 147  HPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTSRIEGKGHTNQELG---KIAKIYR 203

Query: 1064 ALVTGIIEENQVVISQPIGVIRYPGVANGLYVALSSGKPALSKVKVLERNVEENHSLVQV 885
            ALV+GII  +QV I+QPIG+++YPGVA GLYVA  SGKPALS V VLERNV+EN +LVQV
Sbjct: 204  ALVSGIINNDQVTINQPIGMVKYPGVAKGLYVASQSGKPALSVVHVLERNVKENSTLVQV 263

Query: 884  -EIQTGRPHQIRIHLSFLGHPLLGDPLYVTGGHPNCFDFESSISSCAQDGGYQRPMKPVP 708
             +IQ+GRPHQIRIHLSF+GHPLLGDPLY  GG P C D +    S A+DGGY RP KPVP
Sbjct: 264  VKIQSGRPHQIRIHLSFIGHPLLGDPLYAVGGQPKCLDCDFLDESFAEDGGYTRPSKPVP 323

Query: 707  GDCGYYLNAYRLVLDHPTTNEALEITAPLPSILKTQEES 591
            GDCGY+L+A+RL L HP TNE +E+ APLPSIL+T EE+
Sbjct: 324  GDCGYHLHAHRLFLSHPITNEIIEMIAPLPSILQTHEEA 362


>ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  303 bits (777), Expect = 5e-80
 Identities = 148/218 (67%), Positives = 176/218 (80%)
 Frame = -3

Query: 1244 NPVPVHRLGRGTSGILLCAKTKLAKVRLAAYFADGTSVVEDKRITNLELNTTRKILKIYR 1065
            +PVPVHRLGRGTSGILLCAKTKLA+ + AAYFA+GTS V   R + +E  T RKI KIYR
Sbjct: 149  HPVPVHRLGRGTSGILLCAKTKLARTQFAAYFAEGTSSVRRNRNSTMEEGTKRKISKIYR 208

Query: 1064 ALVTGIIEENQVVISQPIGVIRYPGVANGLYVALSSGKPALSKVKVLERNVEENHSLVQV 885
            ALVTGII +++V + QPIG ++YPGVA GLYVA  SGKPA SKV VLER+ +  H+LVQV
Sbjct: 209  ALVTGIIHDDEVSVDQPIGRMQYPGVAQGLYVATPSGKPACSKVNVLERDEQSKHTLVQV 268

Query: 884  EIQTGRPHQIRIHLSFLGHPLLGDPLYVTGGHPNCFDFESSISSCAQDGGYQRPMKPVPG 705
            EIQ+GRPHQIRIHLS +GHPLLGDPLYV GG PNC   E    S A+DGGY+RP KPVPG
Sbjct: 269  EIQSGRPHQIRIHLSSIGHPLLGDPLYVAGGQPNCLHSEVVNQSFAEDGGYERPTKPVPG 328

Query: 704  DCGYYLNAYRLVLDHPTTNEALEITAPLPSILKTQEES 591
            DCGYYL+A++L+L HP TNE ++I APLP IL+T+ E+
Sbjct: 329  DCGYYLHAHQLILYHPKTNEVVKIIAPLPPILRTRIEA 366


>ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  302 bits (774), Expect = 1e-79
 Identities = 147/218 (67%), Positives = 176/218 (80%)
 Frame = -3

Query: 1244 NPVPVHRLGRGTSGILLCAKTKLAKVRLAAYFADGTSVVEDKRITNLELNTTRKILKIYR 1065
            +PVPVHRLGRGTSGILLCAKTKLA+ + AAYFA+GTS V   R + +E  T RKI KIYR
Sbjct: 149  HPVPVHRLGRGTSGILLCAKTKLARTQFAAYFAEGTSSVRRNRNSTMEEGTKRKISKIYR 208

Query: 1064 ALVTGIIEENQVVISQPIGVIRYPGVANGLYVALSSGKPALSKVKVLERNVEENHSLVQV 885
            ALVTGII +++V + QPIG ++YPGVA GLYVA  SGKPA SKV VLER+ +  H+LVQV
Sbjct: 209  ALVTGIIHDDEVSVDQPIGRMQYPGVAQGLYVATPSGKPACSKVNVLERDEQSKHTLVQV 268

Query: 884  EIQTGRPHQIRIHLSFLGHPLLGDPLYVTGGHPNCFDFESSISSCAQDGGYQRPMKPVPG 705
            EIQ+GRPHQIRIHLS +GHPL+GDPLYV GG PNC   E    S A+DGGY+RP KPVPG
Sbjct: 269  EIQSGRPHQIRIHLSSIGHPLVGDPLYVAGGQPNCLHSEVVNQSFAEDGGYERPTKPVPG 328

Query: 704  DCGYYLNAYRLVLDHPTTNEALEITAPLPSILKTQEES 591
            DCGYYL+A++L+L HP TNE ++I APLP IL+T+ E+
Sbjct: 329  DCGYYLHAHQLILYHPKTNEVVKIIAPLPPILRTRIEA 366