BLASTX nr result

ID: Coptis23_contig00025995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025995
         (731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA21923.1| ZPT2-14 [Petunia x hybrida]                           167   2e-39
ref|XP_002528469.1| nucleic acid binding protein, putative [Rici...   158   9e-37
emb|CAN64128.1| hypothetical protein VITISV_022422 [Vitis vinifera]   154   2e-35
ref|XP_002284384.1| PREDICTED: zinc finger protein ZAT11 [Vitis ...   154   2e-35
ref|XP_002284111.1| PREDICTED: zinc finger protein ZAT12-like [V...   153   4e-35

>dbj|BAA21923.1| ZPT2-14 [Petunia x hybrida]
          Length = 166

 Score =  167 bits (423), Expect = 2e-39
 Identities = 93/166 (56%), Positives = 113/166 (68%), Gaps = 1/166 (0%)
 Frame = +3

Query: 33  ILLLSMKRTREDQEMKSMKSMDKCLMLRPFEDKE-NDLGIHAPHRSFECKTCNRKFPSFQ 209
           +++L +KR RE  E KS+ +M   LML   ++   N +  ++P R FECKTCNR+F SFQ
Sbjct: 1   MVVLPLKRERE-AEFKSITTMANYLMLFSHQENHFNTMMDNSPSRVFECKTCNRQFSSFQ 59

Query: 210 ALGGHRASHKRPRFLGEDVYHDNKNTSPSKPRVHECSICGLEFSIGQALGGHMRRHRRTG 389
           ALGGHRASHK+PR +GE   +    TSP KP+ HECSICGLEF IGQALGGHMRRHR   
Sbjct: 60  ALGGHRASHKKPRLMGE--LNFQLPTSPPKPKTHECSICGLEFPIGQALGGHMRRHRAVM 117

Query: 390 KEXXXXXXXXXXXXXTVKKANGRRVLCLDLNLSPLENDLNLQFRSG 527
            E              VKK+N RRVLCLDLNL+PLEND NL+F+ G
Sbjct: 118 NE------NNLQVTPVVKKSNSRRVLCLDLNLTPLEND-NLEFKLG 156


>ref|XP_002528469.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223532145|gb|EEF33952.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 190

 Score =  158 bits (400), Expect = 9e-37
 Identities = 93/197 (47%), Positives = 115/197 (58%), Gaps = 22/197 (11%)
 Frame = +3

Query: 48  MKRTREDQEMKSMKSMDKCLMLR---------PFEDKENDLGIHAPHRSFECKTCNRKFP 200
           MKR+  + E+ S+ SM  CLML          P  +      I++ +R FECKTCNR+FP
Sbjct: 1   MKRSFREAEIDSL-SMANCLMLLSQGREIVSFPSFEAMKGTNINSSNRVFECKTCNRQFP 59

Query: 201 SFQALGGHRASHKRPRFLGEDVYHDNKNTSPSKPRVHECSICGLEFSIGQALGGHMRRHR 380
           SFQALGGHRASHK+PR    DV      +SP+KP+ HECSICGLEF+IGQALGGHMRRHR
Sbjct: 60  SFQALGGHRASHKKPRLTNGDVGSLETQSSPAKPKTHECSICGLEFAIGQALGGHMRRHR 119

Query: 381 R-------------TGKEXXXXXXXXXXXXXTVKKANGRRVLCLDLNLSPLENDLNLQFR 521
                         T                 +KK+N RRVLCLDLNL+P END+ L FR
Sbjct: 120 AINNDSSSLSTPSPTSSAELMAVKPAGVAPPVMKKSNSRRVLCLDLNLTPYENDVEL-FR 178

Query: 522 SGLSYNQRSPPILKQFL 572
            G     ++ P++  FL
Sbjct: 179 LG-----KTAPMVDCFL 190


>emb|CAN64128.1| hypothetical protein VITISV_022422 [Vitis vinifera]
          Length = 647

 Score =  154 bits (389), Expect = 2e-35
 Identities = 88/167 (52%), Positives = 106/167 (63%), Gaps = 4/167 (2%)
 Frame = +3

Query: 48  MKRTRED--QEMKSMKSMDKCLMLRPFEDKENDLGIHAPHRSFECKTCNRKFPSFQALGG 221
           MKR+R D   E++++ +M  CLML     K        P R FECKTCNRKFPSFQALGG
Sbjct: 1   MKRSRVDGVDEVEAL-AMANCLMLLSRVGKSESTN-QLPGRVFECKTCNRKFPSFQALGG 58

Query: 222 HRASHKRPRFLGEDVYHDNKNTSPSKPRVHECSICGLEFSIGQALGGHMRRHRRTGKEXX 401
           HRASHK+PR +G+++      TSP+KP+ HECSICGLEF+IGQALGGHMRRHR       
Sbjct: 59  HRASHKKPRLMGDEL---QLPTSPAKPKTHECSICGLEFAIGQALGGHMRRHR------- 108

Query: 402 XXXXXXXXXXXTVKKANGRRVLC--LDLNLSPLENDLNLQFRSGLSY 536
                       VKK +  RVL   LDLNL+P ENDL +QFR    +
Sbjct: 109 -SEIHNPTPVSVVKKTSDERVLSLDLDLNLTPWENDLKIQFRKNKGF 154


>ref|XP_002284384.1| PREDICTED: zinc finger protein ZAT11 [Vitis vinifera]
          Length = 159

 Score =  154 bits (388), Expect = 2e-35
 Identities = 88/162 (54%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
 Frame = +3

Query: 48  MKRTRED--QEMKSMKSMDKCLMLRPFEDKENDLGIHAPHRSFECKTCNRKFPSFQALGG 221
           MKR+R D   E++++ +M  CLML     K        P R FECKTCNRKFPSFQALGG
Sbjct: 1   MKRSRVDGVDEVEAL-AMANCLMLLSRVGKSESTN-QLPGRVFECKTCNRKFPSFQALGG 58

Query: 222 HRASHKRPRFLGEDVYHDNKNTSPSKPRVHECSICGLEFSIGQALGGHMRRHRRTGKEXX 401
           HRASHK+PR +G+++      TSP+KP+ HECSICGLEF+IGQALGGHMRRHR       
Sbjct: 59  HRASHKKPRLMGDEL---QLPTSPAKPKTHECSICGLEFAIGQALGGHMRRHR------- 108

Query: 402 XXXXXXXXXXXTVKKANGRRVLC--LDLNLSPLENDLNLQFR 521
                       VKK +  RVL   LDLNL+P ENDL +QFR
Sbjct: 109 -SEIHNPTPVSVVKKTSDERVLSLDLDLNLTPWENDLKIQFR 149


>ref|XP_002284111.1| PREDICTED: zinc finger protein ZAT12-like [Vitis vinifera]
          Length = 176

 Score =  153 bits (386), Expect = 4e-35
 Identities = 91/172 (52%), Positives = 109/172 (63%), Gaps = 10/172 (5%)
 Frame = +3

Query: 42  LSMKRTREDQEMKSMKSMDKCLMLRPFEDKENDLGIHAPHRSFECKTCNRKFPSFQALGG 221
           ++MKR R D E +S+ S+  CLML      + D     P R FECKTCNR+FPSFQALGG
Sbjct: 1   MTMKRMR-DGEHESV-SIANCLMLLS-RGTDYDSIARVPSRVFECKTCNRQFPSFQALGG 57

Query: 222 HRASHKRPRFL---GEDVYHDNKNTSPSKPRVHECSICGLEFSIGQALGGHMRRHRRTG- 389
           HRASHK+PR +   G+D       +SP KP+ HECSICGLEF+IGQALGGHMRRHR    
Sbjct: 58  HRASHKKPRLMALNGDD--PAQLQSSPLKPKTHECSICGLEFAIGQALGGHMRRHRAAAS 115

Query: 390 ------KEXXXXXXXXXXXXXTVKKANGRRVLCLDLNLSPLENDLNLQFRSG 527
                  E              +KK N RRVLCLDLNL+PLEN ++LQF+ G
Sbjct: 116 GATQALSETTSSSSPPPPQAPLLKKPNSRRVLCLDLNLTPLEN-IDLQFQLG 166


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