BLASTX nr result
ID: Coptis23_contig00025986
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00025986
(287 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_007476331.1| PsbA (chloroplast) [Trithuria inconspicua] g... 199 2e-49
gb|AAV97753.1| PsbA [Greeneothallus gemmiparus] 199 2e-49
gb|AAV97756.1| PsbA [Pellia appalachiana] 199 2e-49
gb|AAV97757.1| PsbA [Pellia endiviifolia] 199 2e-49
gb|AAV97752.1| PsbA [Frullania eboracensis] gi|234205586|gb|ACQ9... 199 2e-49
>ref|YP_007476331.1| PsbA (chloroplast) [Trithuria inconspicua]
gi|449713821|emb|CCJ32497.1| PsbA (chloroplast)
[Trithuria inconspicua]
Length = 353
Score = 199 bits (507), Expect = 2e-49
Identities = 95/95 (100%), Positives = 95/95 (100%)
Frame = +3
Query: 3 AHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQ 182
AHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQ
Sbjct: 251 AHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQ 310
Query: 183 GRVINTWADIINRANLGMEVMHERNAHNFPLDLAA 287
GRVINTWADIINRANLGMEVMHERNAHNFPLDLAA
Sbjct: 311 GRVINTWADIINRANLGMEVMHERNAHNFPLDLAA 345
>gb|AAV97753.1| PsbA [Greeneothallus gemmiparus]
Length = 353
Score = 199 bits (507), Expect = 2e-49
Identities = 95/95 (100%), Positives = 95/95 (100%)
Frame = +3
Query: 3 AHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQ 182
AHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQ
Sbjct: 251 AHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQ 310
Query: 183 GRVINTWADIINRANLGMEVMHERNAHNFPLDLAA 287
GRVINTWADIINRANLGMEVMHERNAHNFPLDLAA
Sbjct: 311 GRVINTWADIINRANLGMEVMHERNAHNFPLDLAA 345
>gb|AAV97756.1| PsbA [Pellia appalachiana]
Length = 353
Score = 199 bits (507), Expect = 2e-49
Identities = 95/95 (100%), Positives = 95/95 (100%)
Frame = +3
Query: 3 AHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQ 182
AHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQ
Sbjct: 251 AHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQ 310
Query: 183 GRVINTWADIINRANLGMEVMHERNAHNFPLDLAA 287
GRVINTWADIINRANLGMEVMHERNAHNFPLDLAA
Sbjct: 311 GRVINTWADIINRANLGMEVMHERNAHNFPLDLAA 345
>gb|AAV97757.1| PsbA [Pellia endiviifolia]
Length = 174
Score = 199 bits (507), Expect = 2e-49
Identities = 95/95 (100%), Positives = 95/95 (100%)
Frame = +3
Query: 3 AHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQ 182
AHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQ
Sbjct: 72 AHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQ 131
Query: 183 GRVINTWADIINRANLGMEVMHERNAHNFPLDLAA 287
GRVINTWADIINRANLGMEVMHERNAHNFPLDLAA
Sbjct: 132 GRVINTWADIINRANLGMEVMHERNAHNFPLDLAA 166
>gb|AAV97752.1| PsbA [Frullania eboracensis] gi|234205586|gb|ACQ91275.1|
photosystem II 32 kDa protein [Frullania falciloba]
gi|234205589|gb|ACQ91276.1| photosystem II 32 kDa
protein [Frullania falciloba]
gi|234205592|gb|ACQ91277.1| photosystem II 32 kDa
protein [Frullania vittiana] gi|234205594|gb|ACQ91278.1|
photosystem II 32 kDa protein [Frullania squarrosula]
gi|234205597|gb|ACQ91279.1| photosystem II 32 kDa
protein [Frullania nicholsonii]
gi|234205599|gb|ACQ91280.1| photosystem II 32 kDa
protein [Frullania falciloba]
gi|234205602|gb|ACQ91281.1| photosystem II 32 kDa
protein [Frullania ericoides]
gi|234205604|gb|ACQ91282.1| photosystem II 32 kDa
protein [Frullania ericoides]
gi|234205607|gb|ACQ91283.1| photosystem II 32 kDa
protein [Frullania ericoides]
gi|234205609|gb|ACQ91284.1| photosystem II 32 kDa
protein [Frullania ericoides]
gi|234205611|gb|ACQ91285.1| photosystem II 32 kDa
protein [Frullania ericoides]
gi|234205614|gb|ACQ91286.1| photosystem II 32 kDa
protein [Frullania ericoides]
gi|234205616|gb|ACQ91287.1| photosystem II 32 kDa
protein [Frullania pycnantha]
gi|234205619|gb|ACQ91288.1| photosystem II 32 kDa
protein [Frullania ericoides]
gi|234205621|gb|ACQ91289.1| photosystem II 32 kDa
protein [Frullania anderssonii]
gi|234205624|gb|ACQ91290.1| photosystem II 32 kDa
protein [Frullania howeana] gi|234205626|gb|ACQ91291.1|
photosystem II 32 kDa protein [Frullania spinifera]
gi|234205629|gb|ACQ91292.1| photosystem II 32 kDa
protein [Frullania ampullifera]
gi|234205631|gb|ACQ91293.1| photosystem II 32 kDa
protein [Frullania eymae] gi|234205634|gb|ACQ91294.1|
photosystem II 32 kDa protein [Frullania berthoumieuii]
gi|234205636|gb|ACQ91295.1| photosystem II 32 kDa
protein [Frullania subnigricaulis var. subtruncata]
gi|234205639|gb|ACQ91296.1| photosystem II 32 kDa
protein [Frullania spinigastria]
gi|234205642|gb|ACQ91297.1| photosystem II 32 kDa
protein [Frullania patula] gi|234205645|gb|ACQ91298.1|
photosystem II 32 kDa protein [Frullania deplanata]
gi|234205648|gb|ACQ91299.1| photosystem II 32 kDa
protein [Frullania scandens] gi|234205651|gb|ACQ91300.1|
photosystem II 32 kDa protein [Frullania diptera]
gi|234205654|gb|ACQ91301.1| photosystem II 32 kDa
protein [Frullania allanii] gi|234205657|gb|ACQ91302.1|
photosystem II 32 kDa protein [Frullania acutiloba]
gi|234205660|gb|ACQ91303.1| photosystem II 32 kDa
protein [Frullania reflexistipula]
gi|234205663|gb|ACQ91304.1| photosystem II 32 kDa
protein [Frullania monocera] gi|234205666|gb|ACQ91305.1|
photosystem II 32 kDa protein [Frullania
ferdinandi-muelleri] gi|234205668|gb|ACQ91306.1|
photosystem II 32 kDa protein [Frullania
ferdinandi-muelleri] gi|234205674|gb|ACQ91308.1|
photosystem II 32 kDa protein [Frullania orientalis]
gi|234205686|gb|ACQ91312.1| photosystem II 32 kDa
protein [Frullania plana] gi|234205689|gb|ACQ91313.1|
photosystem II 32 kDa protein [Frullania plana]
gi|234205692|gb|ACQ91314.1| photosystem II 32 kDa
protein [Frullania eboracensis subsp. parvistipula]
gi|234205695|gb|ACQ91315.1| photosystem II 32 kDa
protein [Frullania eboracensis subsp. parvistipula]
gi|234205698|gb|ACQ91316.1| photosystem II 32 kDa
protein [Frullania azorica] gi|234205701|gb|ACQ91317.1|
photosystem II 32 kDa protein [Frullania eboracensis
subsp. eboracensis] gi|234205704|gb|ACQ91318.1|
photosystem II 32 kDa protein [Frullania eboracensis
subsp. parvistipula] gi|234205707|gb|ACQ91319.1|
photosystem II 32 kDa protein [Frullania usamiensis]
gi|234205710|gb|ACQ91320.1| photosystem II 32 kDa
protein [Frullania fuscovirens var. gemmipara]
gi|234205713|gb|ACQ91321.1| photosystem II 32 kDa
protein [Frullania taradakensis]
gi|234205716|gb|ACQ91322.1| photosystem II 32 kDa
protein [Frullania brittoniae]
gi|234205719|gb|ACQ91323.1| photosystem II 32 kDa
protein [Frullania duthiana] gi|234205725|gb|ACQ91325.1|
photosystem II 32 kDa protein [Frullania jackii]
gi|234205729|gb|ACQ91326.1| photosystem II 32 kDa
protein [Frullania subcaduca]
gi|234205732|gb|ACQ91327.1| photosystem II 32 kDa
protein [Frullania riparia] gi|234205735|gb|ACQ91328.1|
photosystem II 32 kDa protein [Frullania amplicrania]
gi|234205750|gb|ACQ91333.1| photosystem II 32 kDa
protein [Frullania obscurifolia]
gi|234205753|gb|ACQ91334.1| photosystem II 32 kDa
protein [Frullania subincumbens]
gi|234205756|gb|ACQ91335.1| photosystem II 32 kDa
protein [Frullania cf. fulfordiae Pocs & Pocs 01048/N]
gi|234205762|gb|ACQ91337.1| photosystem II 32 kDa
protein [Frullania fulfordiae]
gi|234205768|gb|ACQ91339.1| photosystem II 32 kDa
protein [Frullania incumbens]
gi|234205771|gb|ACQ91340.1| photosystem II 32 kDa
protein [Frullania anomala] gi|234205774|gb|ACQ91341.1|
photosystem II 32 kDa protein [Frullania anomala]
gi|234205777|gb|ACQ91342.1| photosystem II 32 kDa
protein [Frullania glomerata]
gi|234205781|gb|ACQ91343.1| photosystem II 32 kDa
protein [Frullania solanderiana]
gi|234206045|gb|ACQ91418.1| photosystem II 32 kDa
protein [Frullania kunzei] gi|234206049|gb|ACQ91419.1|
photosystem II 32 kDa protein [Frullania kunzei]
gi|234207118|gb|ACQ91592.1| photosystem II 32 kDa
protein [Frullania echinantha]
gi|234207122|gb|ACQ91593.1| photosystem II 32 kDa
protein [Frullania fengyangshanensis]
Length = 353
Score = 199 bits (507), Expect = 2e-49
Identities = 95/95 (100%), Positives = 95/95 (100%)
Frame = +3
Query: 3 AHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQ 182
AHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQ
Sbjct: 251 AHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQ 310
Query: 183 GRVINTWADIINRANLGMEVMHERNAHNFPLDLAA 287
GRVINTWADIINRANLGMEVMHERNAHNFPLDLAA
Sbjct: 311 GRVINTWADIINRANLGMEVMHERNAHNFPLDLAA 345