BLASTX nr result

ID: Coptis23_contig00025981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025981
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512727.1| protein with unknown function [Ricinus commu...    63   3e-08
ref|XP_002303855.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002332071.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>ref|XP_002512727.1| protein with unknown function [Ricinus communis]
           gi|223547738|gb|EEF49230.1| protein with unknown
           function [Ricinus communis]
          Length = 532

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 42/99 (42%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
 Frame = +1

Query: 4   ETPTISPPAESSANEVNFXXXXXXXXXXXXPYKNNRVDYNAKTLNHNGNGIGAGVNDNST 183
           ETP I  P +S  NEV+F              KN+R  YN + LN N     A +   S 
Sbjct: 101 ETPAIGTPVDS-CNEVDFALALQASSSS----KNSRTCYNVRALNLNSLNYNANIASESD 155

Query: 184 RAKGSYHKGKEIS-IAVIDGEDWN-KFVPYNDELCSIYH 294
            AK    KGKE+S + +  G+DWN KFVPY+DE CSI H
Sbjct: 156 -AKAGNGKGKEVSGVDIGGGDDWNCKFVPYDDEPCSIDH 193


>ref|XP_002303855.1| predicted protein [Populus trichocarpa] gi|222841287|gb|EEE78834.1|
           predicted protein [Populus trichocarpa]
          Length = 717

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 41/98 (41%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
 Frame = +1

Query: 4   ETPTISPPAESSANEVNFXXXXXXXXXXXXPYKNNRVDYNAKTLNHNGNGIGAGVNDNST 183
           ETP I  P ES  +EV+F              KN+R  YN K LN N     A +   S 
Sbjct: 265 ETPAIGTPVES-CHEVDFALALQASSSS----KNSRTCYNVKALNLNSVNYNANIAGESD 319

Query: 184 RAKGSYHKGKEISIAVIDGEDWN-KFVPYNDELCSIYH 294
              G+  KGKE+S   I G+DWN +FVPY+DE CS  H
Sbjct: 320 VKVGN-GKGKEVSSVDIGGDDWNCRFVPYDDEFCSNDH 356


>ref|XP_002332071.1| predicted protein [Populus trichocarpa] gi|222831957|gb|EEE70434.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 40/98 (40%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
 Frame = +1

Query: 4   ETPTISPPAESSANEVNFXXXXXXXXXXXXPYKNNRVDYNAKTLNHNGNGIGAGVNDNST 183
           ETP    P ES  +EV+F              KNNR  YN K LN N     A +   S 
Sbjct: 4   ETPANGTPVES-CHEVDFALALQASSSS----KNNRTCYNVKALNLNSLNDNANIVSESV 58

Query: 184 RAKGSYHKGKEISIAVIDGEDWN-KFVPYNDELCSIYH 294
             K    KGKE+S   I   DWN KFVPY+D+ CS  H
Sbjct: 59  -VKVRNGKGKEVSSVDIGWGDWNCKFVPYDDDFCSNDH 95


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