BLASTX nr result

ID: Coptis23_contig00025956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025956
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002468351.1| hypothetical protein SORBIDRAFT_01g044300 [S...   150   8e-39
dbj|BAD23339.1| putative RNA helicase [Oryza sativa Japonica Group]   150   8e-39
gb|EAY85485.1| hypothetical protein OsI_06862 [Oryza sativa Indi...   150   8e-39
gb|EEE56790.1| hypothetical protein OsJ_06372 [Oryza sativa Japo...   150   8e-39
ref|NP_001046623.1| Os02g0301500 [Oryza sativa Japonica Group] g...   150   8e-39

>ref|XP_002468351.1| hypothetical protein SORBIDRAFT_01g044300 [Sorghum bicolor]
           gi|241922205|gb|EER95349.1| hypothetical protein
           SORBIDRAFT_01g044300 [Sorghum bicolor]
          Length = 1242

 Score =  150 bits (380), Expect(2) = 8e-39
 Identities = 71/85 (83%), Positives = 79/85 (92%)
 Frame = -1

Query: 255 SSATLDAEKFSGYFSDCNIFTIPGRTYPLEILYAKQPESDYLDAALMTVLHIHLKKPEGD 76
           +SATLDAEKFSGYF +CNIFTIPGRT+P+EILY KQPESDYLDAAL+TVL IHL +PEGD
Sbjct: 740 TSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAALITVLQIHLTEPEGD 799

Query: 75  ILLFLTGQEEIDHACKTLFERMNGL 1
           ILLFLTGQEEIDHAC+ L+ERM GL
Sbjct: 800 ILLFLTGQEEIDHACQCLYERMKGL 824



 Score = 34.7 bits (78), Expect(2) = 8e-39
 Identities = 15/17 (88%), Positives = 17/17 (100%)
 Frame = -2

Query: 302 DVLFGLLKQLVKRRSDL 252
           DVLFGLLKQL+KRRSD+
Sbjct: 719 DVLFGLLKQLIKRRSDM 735


>dbj|BAD23339.1| putative RNA helicase [Oryza sativa Japonica Group]
          Length = 1240

 Score =  150 bits (380), Expect(2) = 8e-39
 Identities = 71/85 (83%), Positives = 79/85 (92%)
 Frame = -1

Query: 255 SSATLDAEKFSGYFSDCNIFTIPGRTYPLEILYAKQPESDYLDAALMTVLHIHLKKPEGD 76
           +SATLDAEKFSGYF +CNIFTIPGRT+P+EILY KQPESDYLDAAL+TVL IHL +PEGD
Sbjct: 738 TSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAALITVLQIHLTEPEGD 797

Query: 75  ILLFLTGQEEIDHACKTLFERMNGL 1
           ILLFLTGQEEIDHAC+ L+ERM GL
Sbjct: 798 ILLFLTGQEEIDHACQCLYERMKGL 822



 Score = 34.7 bits (78), Expect(2) = 8e-39
 Identities = 15/17 (88%), Positives = 17/17 (100%)
 Frame = -2

Query: 302 DVLFGLLKQLVKRRSDL 252
           DVLFGLLKQL+KRRSD+
Sbjct: 717 DVLFGLLKQLIKRRSDM 733


>gb|EAY85485.1| hypothetical protein OsI_06862 [Oryza sativa Indica Group]
          Length = 1240

 Score =  150 bits (380), Expect(2) = 8e-39
 Identities = 71/85 (83%), Positives = 79/85 (92%)
 Frame = -1

Query: 255 SSATLDAEKFSGYFSDCNIFTIPGRTYPLEILYAKQPESDYLDAALMTVLHIHLKKPEGD 76
           +SATLDAEKFSGYF +CNIFTIPGRT+P+EILY KQPESDYLDAAL+TVL IHL +PEGD
Sbjct: 738 TSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAALITVLQIHLTEPEGD 797

Query: 75  ILLFLTGQEEIDHACKTLFERMNGL 1
           ILLFLTGQEEIDHAC+ L+ERM GL
Sbjct: 798 ILLFLTGQEEIDHACQCLYERMKGL 822



 Score = 34.7 bits (78), Expect(2) = 8e-39
 Identities = 15/17 (88%), Positives = 17/17 (100%)
 Frame = -2

Query: 302 DVLFGLLKQLVKRRSDL 252
           DVLFGLLKQL+KRRSD+
Sbjct: 717 DVLFGLLKQLIKRRSDM 733


>gb|EEE56790.1| hypothetical protein OsJ_06372 [Oryza sativa Japonica Group]
          Length = 953

 Score =  150 bits (380), Expect(2) = 8e-39
 Identities = 71/85 (83%), Positives = 79/85 (92%)
 Frame = -1

Query: 255 SSATLDAEKFSGYFSDCNIFTIPGRTYPLEILYAKQPESDYLDAALMTVLHIHLKKPEGD 76
           +SATLDAEKFSGYF +CNIFTIPGRT+P+EILY KQPESDYLDAAL+TVL IHL +PEGD
Sbjct: 738 TSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAALITVLQIHLTEPEGD 797

Query: 75  ILLFLTGQEEIDHACKTLFERMNGL 1
           ILLFLTGQEEIDHAC+ L+ERM GL
Sbjct: 798 ILLFLTGQEEIDHACQCLYERMKGL 822



 Score = 34.7 bits (78), Expect(2) = 8e-39
 Identities = 15/17 (88%), Positives = 17/17 (100%)
 Frame = -2

Query: 302 DVLFGLLKQLVKRRSDL 252
           DVLFGLLKQL+KRRSD+
Sbjct: 717 DVLFGLLKQLIKRRSDM 733


>ref|NP_001046623.1| Os02g0301500 [Oryza sativa Japonica Group]
           gi|113536154|dbj|BAF08537.1| Os02g0301500, partial
           [Oryza sativa Japonica Group]
          Length = 546

 Score =  150 bits (380), Expect(2) = 8e-39
 Identities = 71/85 (83%), Positives = 79/85 (92%)
 Frame = -1

Query: 255 SSATLDAEKFSGYFSDCNIFTIPGRTYPLEILYAKQPESDYLDAALMTVLHIHLKKPEGD 76
           +SATLDAEKFSGYF +CNIFTIPGRT+P+EILY KQPESDYLDAAL+TVL IHL +PEGD
Sbjct: 44  TSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAALITVLQIHLTEPEGD 103

Query: 75  ILLFLTGQEEIDHACKTLFERMNGL 1
           ILLFLTGQEEIDHAC+ L+ERM GL
Sbjct: 104 ILLFLTGQEEIDHACQCLYERMKGL 128



 Score = 34.7 bits (78), Expect(2) = 8e-39
 Identities = 15/17 (88%), Positives = 17/17 (100%)
 Frame = -2

Query: 302 DVLFGLLKQLVKRRSDL 252
           DVLFGLLKQL+KRRSD+
Sbjct: 23  DVLFGLLKQLIKRRSDM 39


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