BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025954
         (989 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533153.1| conserved hypothetical protein [Ricinus comm...   364   2e-98
ref|XP_002315219.1| predicted protein [Populus trichocarpa] gi|2...   356   4e-96
ref|XP_002278568.2| PREDICTED: AP3-complex subunit beta-A-like [...   350   2e-94
ref|XP_003519348.1| PREDICTED: AP3-complex subunit beta-A-like [...   336   6e-90
ref|XP_003544215.1| PREDICTED: AP3-complex subunit beta-A-like [...   334   2e-89

>ref|XP_002533153.1| conserved hypothetical protein [Ricinus communis]
            gi|223527048|gb|EEF29234.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1121

 Score =  364 bits (934), Expect = 2e-98
 Identities = 182/290 (62%), Positives = 220/290 (75%), Gaps = 1/290 (0%)
 Frame = +3

Query: 6    ARITLKDIGARIHRKTYTLLDPTHGNGLKVDYXXXXXXXXXXXXXXCVELSFENCSTESL 185
            ARI+++DIG+R+   +Y LLDP +GNGLKVDY              CVE+SFENCSTE++
Sbjct: 839  ARISIRDIGSRVKPNSYGLLDPANGNGLKVDYSFSSEISSISHLLVCVEVSFENCSTETI 898

Query: 186  ATITLIDEESHQTSESTNDASNTCESSSTSYI-VPTVVPMEEVTGLGPGQTTKRTMEVDF 362
            + + L+DEES++  +ST       ESS TS+  VP +VPMEE+  L PGQ TKR + V F
Sbjct: 899  SEVMLVDEESNKAPDST-------ESSLTSHNDVPILVPMEEMISLEPGQVTKRILHVRF 951

Query: 363  HHHLLPLKLAVCCDGKKLPVKLRPDIGYFVKPLPMDIETFKTKESQLPGMFEYSRSFSFT 542
            HHHLLPLKL + C+GKKLPVKLRPDIGYFVKPLPM+IE F  KES+LPGMFEY RS +F 
Sbjct: 952  HHHLLPLKLVLYCNGKKLPVKLRPDIGYFVKPLPMNIEAFTDKESRLPGMFEYMRSCTFN 1011

Query: 543  DHVMDINNEEGNTSMRDNLLIVCRSLASKMLSNANLFLVSVDMPVTANLDDASGLCFRFS 722
             H+ ++N ++G+  MRD  L+VC SLA KMLSNANLFLVSVDMP+  NLDDASGLC RFS
Sbjct: 1012 YHIEELNKDKGDMLMRDKFLLVCESLAVKMLSNANLFLVSVDMPIAVNLDDASGLCLRFS 1071

Query: 723  GEILSDLIPCLITVTVEGKCSAPLNVSTKVNCEETIFGLNLLNRVAVILS 872
             EILS+ IPCLIT+T EGKC+ PLNV  KVNCEET+FGLNLLNR+   LS
Sbjct: 1072 SEILSNSIPCLITLTAEGKCTEPLNVCIKVNCEETVFGLNLLNRIVNFLS 1121


>ref|XP_002315219.1| predicted protein [Populus trichocarpa] gi|222864259|gb|EEF01390.1|
            predicted protein [Populus trichocarpa]
          Length = 991

 Score =  356 bits (914), Expect = 4e-96
 Identities = 177/290 (61%), Positives = 218/290 (75%), Gaps = 1/290 (0%)
 Frame = +3

Query: 6    ARITLKDIGARIHRKTYTLLDPTHGNGLKVDYXXXXXXXXXXXXXXCVELSFENCSTESL 185
            ARI+++DI +R+  K+Y LLDP +GNGLKVDY               VE+SFENC+ E++
Sbjct: 709  ARISIRDISSRVKPKSYRLLDPANGNGLKVDYSFSPEISSISPLLVSVEVSFENCTDETI 768

Query: 186  ATITLIDEESHQTSESTNDASNTCESSSTSYIVPTVVPMEEVTGLGPGQTTKRTMEVDFH 365
            + + L+DEES + S+S+       ESS +   VPT+VPMEE+  L PGQT K+ + V FH
Sbjct: 769  SEVALVDEESSKASDSS-------ESSPSHKDVPTLVPMEEIASLEPGQTVKKIVYVCFH 821

Query: 366  HHLLPLKLAVCCDGKKLPVKLRPDIGYFVKPLPMDIETFKTKESQLPGMFEYSRSFSFTD 545
            HHLLPLKLA+ C+GKKL VKLRPDIGYFVKPLPMD+E F  KES+LPGMFEY+RSF+F D
Sbjct: 822  HHLLPLKLALYCNGKKLSVKLRPDIGYFVKPLPMDVEAFTNKESRLPGMFEYTRSFTFID 881

Query: 546  HVMDINNEEG-NTSMRDNLLIVCRSLASKMLSNANLFLVSVDMPVTANLDDASGLCFRFS 722
            H+ ++N E G N  ++DN L+VC SLA KMLSNAN  LVSVDMP++A  DD SGLC RFS
Sbjct: 882  HIGELNKESGDNALVKDNFLLVCESLALKMLSNANFSLVSVDMPISAKHDDVSGLCLRFS 941

Query: 723  GEILSDLIPCLITVTVEGKCSAPLNVSTKVNCEETIFGLNLLNRVAVILS 872
            GEILS+ +PCLIT+T EGKCS PLNV  KVNCEET+FGLNLLNR+   LS
Sbjct: 942  GEILSNSMPCLITITAEGKCSEPLNVLVKVNCEETVFGLNLLNRIVNFLS 991


>ref|XP_002278568.2| PREDICTED: AP3-complex subunit beta-A-like [Vitis vinifera]
            gi|296086225|emb|CBI31666.3| unnamed protein product
            [Vitis vinifera]
          Length = 1140

 Score =  350 bits (899), Expect = 2e-94
 Identities = 173/290 (59%), Positives = 220/290 (75%), Gaps = 2/290 (0%)
 Frame = +3

Query: 6    ARITLKDIGARIHRKTYTLLDPTHGNGLKVDYXXXXXXXXXXXXXXCVELSFENCSTESL 185
            ARI++ DIG R+  K Y LLDPT+GNGL+V+Y              CVEL FENCS ES+
Sbjct: 843  ARISIGDIGGRVKPKIYGLLDPTNGNGLRVNYSFSSEVSSMSPQLVCVELIFENCSAESM 902

Query: 186  ATITLIDEESHQTSESTNDASNTCESSSTSYI-VPTVVPMEEVTGLGPGQTTKRTMEVDF 362
            + + L+DEES++  +S + +    ESS  S   VP +V MEE+  + PGQ+TK  ++V F
Sbjct: 903  SKVLLVDEESNKGLDSEDQSLVATESSMPSQNDVPNLVYMEEIASIEPGQSTKCILQVCF 962

Query: 363  HHHLLPLKLAVCCDGKKLPVKLRPDIGYFVKPLPMDIETFKTKESQLPGMFEYSRSFSFT 542
            HHHLLP+KLA+ C+GKK PVKLRPDIGYF+KPLPMD+E F  KES LPGMFEY R  +FT
Sbjct: 963  HHHLLPVKLALWCNGKKYPVKLRPDIGYFIKPLPMDVEVFVNKESHLPGMFEYERRCTFT 1022

Query: 543  DHVMDINNEEGNTSM-RDNLLIVCRSLASKMLSNANLFLVSVDMPVTANLDDASGLCFRF 719
            DH+ ++N+++G++S+ +D  L++C+SLA KMLSNANLFLVSVDMPV +NLDDASGL  RF
Sbjct: 1023 DHIREMNSDKGDSSLTKDKFLVICKSLAVKMLSNANLFLVSVDMPVASNLDDASGLRLRF 1082

Query: 720  SGEILSDLIPCLITVTVEGKCSAPLNVSTKVNCEETIFGLNLLNRVAVIL 869
            S EILS+ IPCLIT+T+EG CS PLNV+ KVNCEET+FGLNLLNR+   L
Sbjct: 1083 SSEILSNSIPCLITITIEGNCSEPLNVTIKVNCEETVFGLNLLNRIVNFL 1132


>ref|XP_003519348.1| PREDICTED: AP3-complex subunit beta-A-like [Glycine max]
          Length = 1129

 Score =  336 bits (861), Expect = 6e-90
 Identities = 170/289 (58%), Positives = 212/289 (73%), Gaps = 1/289 (0%)
 Frame = +3

Query: 6    ARITLKDIGARIHRKTYTLLDPTHGNGLKVDYXXXXXXXXXXXXXXCVELSFENCSTESL 185
            ARIT+ +IG R+  K Y+LLDP +GNGLKV+Y              C+E+ FENCS E +
Sbjct: 834  ARITIGNIGGRVKPKCYSLLDPVNGNGLKVNYSFSSETSSISSHLVCLEVLFENCSLEPM 893

Query: 186  ATITLIDEESHQTSESTNDASNTCESSSTSYI-VPTVVPMEEVTGLGPGQTTKRTMEVDF 362
              I LI+E+  ++S+ST+  S+  E++   ++  P +V MEE+  L PGQT  RT+ V F
Sbjct: 894  FDIVLIEEDYSKSSDSTDQTSSPTENTLKFHVDKPALVSMEEIPSLEPGQTANRTLLVRF 953

Query: 363  HHHLLPLKLAVCCDGKKLPVKLRPDIGYFVKPLPMDIETFKTKESQLPGMFEYSRSFSFT 542
            HHHLLPLKLA+ C+ KK  VKL+PDIGYFVKPLP+ IE FK KES+LPGMFEY RS +F 
Sbjct: 954  HHHLLPLKLALFCNDKKFLVKLKPDIGYFVKPLPLSIEDFKDKESRLPGMFEYVRSCTFN 1013

Query: 543  DHVMDINNEEGNTSMRDNLLIVCRSLASKMLSNANLFLVSVDMPVTANLDDASGLCFRFS 722
            DH++++N ++ N+   D  L++C +LA KMLSNANL LVSVDMPV ANLDDASGLC RFS
Sbjct: 1014 DHILELN-KDSNSLTEDKFLVICETLALKMLSNANLSLVSVDMPVAANLDDASGLCLRFS 1072

Query: 723  GEILSDLIPCLITVTVEGKCSAPLNVSTKVNCEETIFGLNLLNRVAVIL 869
             EILS+ +PCLITVTVEGKCS PL VS KVNCEET+FGLN LNRV   L
Sbjct: 1073 SEILSNSMPCLITVTVEGKCSDPLIVSVKVNCEETVFGLNFLNRVVNFL 1121


>ref|XP_003544215.1| PREDICTED: AP3-complex subunit beta-A-like [Glycine max]
          Length = 1129

 Score =  334 bits (857), Expect = 2e-89
 Identities = 168/289 (58%), Positives = 212/289 (73%), Gaps = 1/289 (0%)
 Frame = +3

Query: 6    ARITLKDIGARIHRKTYTLLDPTHGNGLKVDYXXXXXXXXXXXXXXCVELSFENCSTESL 185
            ARIT+ +IG R+  K YTLLDP +GNGLKV+Y              C+E+ FENCS E +
Sbjct: 834  ARITIGNIGNRVKPKCYTLLDPVNGNGLKVNYSFSSETSSISSHLVCLEVLFENCSLEPM 893

Query: 186  ATITLIDEESHQTSESTNDASNTCESSSTSYI-VPTVVPMEEVTGLGPGQTTKRTMEVDF 362
              I LI+E+  ++S+ST+  S+  E++   ++  P +V MEE+  L PG+T  RT+ V F
Sbjct: 894  FDIVLIEEDYSKSSDSTDRTSSPTENTLKFHVNKPALVSMEEIPSLEPGETANRTLLVRF 953

Query: 363  HHHLLPLKLAVCCDGKKLPVKLRPDIGYFVKPLPMDIETFKTKESQLPGMFEYSRSFSFT 542
            HHHLLPL LA+ C+ KK PVKL+PDIGYF+KPLP+ IE F+ KES+LPGMFEY RS +FT
Sbjct: 954  HHHLLPLHLALFCNDKKFPVKLKPDIGYFIKPLPLSIEDFRDKESRLPGMFEYVRSCTFT 1013

Query: 543  DHVMDINNEEGNTSMRDNLLIVCRSLASKMLSNANLFLVSVDMPVTANLDDASGLCFRFS 722
            DH++++N +  N+   D  L++C +LA +MLSNANL LVSVDMPV ANLDDASGLC RFS
Sbjct: 1014 DHILELN-KRSNSLTEDKFLVICETLALQMLSNANLSLVSVDMPVAANLDDASGLCLRFS 1072

Query: 723  GEILSDLIPCLITVTVEGKCSAPLNVSTKVNCEETIFGLNLLNRVAVIL 869
             EILS+ +PCLITVTVEGKCS PL VS KVNCEET+FGLN LNRV   L
Sbjct: 1073 SEILSNSMPCLITVTVEGKCSDPLIVSVKVNCEETVFGLNFLNRVVNFL 1121