BLASTX nr result

ID: Coptis23_contig00025950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025950
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516803.1| cobalt ion transporter, putative [Ricinus co...    69   5e-10
ref|XP_003594090.1| Protein ABCI12 [Medicago truncatula] gi|3554...    68   7e-10
ref|XP_002277396.2| PREDICTED: protein ABCI12, chloroplastic-lik...    67   2e-09
emb|CBI26163.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|NP_001235255.1| uncharacterized protein LOC100500244 [Glycin...    65   6e-09

>ref|XP_002516803.1| cobalt ion transporter, putative [Ricinus communis]
           gi|223543891|gb|EEF45417.1| cobalt ion transporter,
           putative [Ricinus communis]
          Length = 359

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 49/114 (42%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
 Frame = -3

Query: 415 EMNSTAR--LLFYFPPLSLNSTHHSTLPLKFNPSRTHQPVLKSSKVFQLRXXXXXXXXXX 242
           +MNST    L    P   ++        L  NP  T  P+ K+ K F+LR          
Sbjct: 26  QMNSTQNTILTIISPKFQISGYTQIHSRLHLNPKCT-PPLYKTPKRFKLRSFKIKALVEN 84

Query: 241 XNW---WLKLAPKGPFA-EKIFRAISSATSSPICQFVSSPTTFLHSVDSRIKLV 92
                 W+   P G  A +KIFR IS AT+SPI QF+SSPTTFLHSVD RIKLV
Sbjct: 85  TGETGNWVNRLPTGALAADKIFRLISGATASPIGQFISSPTTFLHSVDPRIKLV 138


>ref|XP_003594090.1| Protein ABCI12 [Medicago truncatula] gi|355483138|gb|AES64341.1|
           Protein ABCI12 [Medicago truncatula]
          Length = 375

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/48 (70%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
 Frame = -3

Query: 232 WLKLAPKGPFA-EKIFRAISSATSSPICQFVSSPTTFLHSVDSRIKLV 92
           W K  P G FA +K+FR ISSAT+SPI QFVSSPTTFLHS+D R+KLV
Sbjct: 59  WSKWIPTGSFAADKVFRLISSATASPIGQFVSSPTTFLHSIDPRVKLV 106


>ref|XP_002277396.2| PREDICTED: protein ABCI12, chloroplastic-like [Vitis vinifera]
          Length = 390

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 45/109 (41%), Positives = 57/109 (52%), Gaps = 12/109 (11%)
 Frame = -3

Query: 382 FPPLSLNSTHHSTLPLKFN-----------PSRTHQPVLKSSKVFQLRXXXXXXXXXXXN 236
           FP  S N T  + +P   +           P  +    L+S+K  +L+            
Sbjct: 13  FPSPSSNPTSKALVPPNLSKLYLLNRQNPKPHLSIYKTLESAKCPRLQIRATANNQGESG 72

Query: 235 WWLKLAPKGPFA-EKIFRAISSATSSPICQFVSSPTTFLHSVDSRIKLV 92
            W K  P+G  A ++I R ISSATSSPI QF+SSPTTFLHSVD RIKLV
Sbjct: 73  NWTKWLPRGVVAADRILRLISSATSSPISQFISSPTTFLHSVDPRIKLV 121


>emb|CBI26163.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 45/109 (41%), Positives = 57/109 (52%), Gaps = 12/109 (11%)
 Frame = -3

Query: 382 FPPLSLNSTHHSTLPLKFN-----------PSRTHQPVLKSSKVFQLRXXXXXXXXXXXN 236
           FP  S N T  + +P   +           P  +    L+S+K  +L+            
Sbjct: 13  FPSPSSNPTSKALVPPNLSKLYLLNRQNPKPHLSIYKTLESAKCPRLQIRATANNQGESG 72

Query: 235 WWLKLAPKGPFA-EKIFRAISSATSSPICQFVSSPTTFLHSVDSRIKLV 92
            W K  P+G  A ++I R ISSATSSPI QF+SSPTTFLHSVD RIKLV
Sbjct: 73  NWTKWLPRGVVAADRILRLISSATSSPISQFISSPTTFLHSVDPRIKLV 121


>ref|NP_001235255.1| uncharacterized protein LOC100500244 [Glycine max]
           gi|255629827|gb|ACU15264.1| unknown [Glycine max]
          Length = 217

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/48 (64%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
 Frame = -3

Query: 232 WLKLAPKGPFA-EKIFRAISSATSSPICQFVSSPTTFLHSVDSRIKLV 92
           W K  P+G FA +K+FR I+ AT+SPI QFV+SPTTFLHS+D R+KLV
Sbjct: 64  WSKWIPEGSFAADKVFRLIAGATASPIGQFVASPTTFLHSIDPRVKLV 111


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