BLASTX nr result

ID: Coptis23_contig00025947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025947
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM11098.1| ABC protein [Coptis japonica]                         160   1e-37
ref|XP_002275143.2| PREDICTED: ABC transporter B family member 1...   159   2e-37
ref|XP_002320942.1| multidrug/pheromone exporter, MDR family, AB...   158   4e-37
ref|XP_002320941.1| multidrug/pheromone exporter, MDR family, AB...   158   4e-37
dbj|BAB62040.1| CjMDR1 [Coptis japonica]                              157   6e-37

>dbj|BAM11098.1| ABC protein [Coptis japonica]
          Length = 1292

 Score =  160 bits (404), Expect = 1e-37
 Identities = 81/102 (79%), Positives = 85/102 (83%)
 Frame = -1

Query: 308 VISLIERFYDPQAGEILIDGINLREFQLRWIREKIGLVGQEPVLFSSSIKDNIAYGKDGX 129
           VISLIERFYDPQAGE+LIDGINL+EFQLRWIR+KIGLV QEPVLF+SSIKDNIAYGKDG 
Sbjct: 441 VISLIERFYDPQAGEVLIDGINLKEFQLRWIRQKIGLVSQEPVLFASSIKDNIAYGKDGA 500

Query: 128 XXXXXXXXXXXXXXAKFIDKLPQGLDTLVGEHGTQLSGGQKQ 3
                         AKFIDKLPQGLDTLVGEHGT LSGGQKQ
Sbjct: 501 TLEDIKAAAELANAAKFIDKLPQGLDTLVGEHGTHLSGGQKQ 542



 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/103 (53%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
 Frame = -1

Query: 308  VISLIERFYDPQAGEILIDGINLREFQLRWIREKIGLVGQEPVLFSSSIKDNIAYGKDG- 132
            VISL++RFYDP +G I +DG+ +++ QLRW+R+++GLV QEPVLF+ +I+ NIAYGK+G 
Sbjct: 1093 VISLLQRFYDPDSGYITLDGVEIQKLQLRWLRQQMGLVSQEPVLFNETIRANIAYGKEGD 1152

Query: 131  XXXXXXXXXXXXXXXAKFIDKLPQGLDTLVGEHGTQLSGGQKQ 3
                            KFI  L QG DT+VGE G QLSGGQKQ
Sbjct: 1153 ATETEILAAAELANAHKFISALQQGYDTMVGERGVQLSGGQKQ 1195


>ref|XP_002275143.2| PREDICTED: ABC transporter B family member 11-like [Vitis vinifera]
          Length = 1294

 Score =  159 bits (402), Expect = 2e-37
 Identities = 80/102 (78%), Positives = 85/102 (83%)
 Frame = -1

Query: 308 VISLIERFYDPQAGEILIDGINLREFQLRWIREKIGLVGQEPVLFSSSIKDNIAYGKDGX 129
           VISLIERFYDPQAGE+LIDGINL+EFQLRWIR KIGLV QEPVLF+SSI+DNIAYGKDG 
Sbjct: 438 VISLIERFYDPQAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLFTSSIRDNIAYGKDGA 497

Query: 128 XXXXXXXXXXXXXXAKFIDKLPQGLDTLVGEHGTQLSGGQKQ 3
                         +KFIDKLPQGLDTLVGEHGTQLSGGQKQ
Sbjct: 498 TIEEIRAAAELANASKFIDKLPQGLDTLVGEHGTQLSGGQKQ 539



 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/102 (51%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
 Frame = -1

Query: 305  ISLIERFYDPQAGEILIDGINLREFQLRWIREKIGLVGQEPVLFSSSIKDNIAYGKDG-X 129
            ISL++RFYDP +G I +DG+ +++ QL+W R+++GLV QEPVLF+ +I+ NIAYGK+G  
Sbjct: 1095 ISLLQRFYDPDSGHITLDGVEIQKLQLKWFRQQMGLVSQEPVLFNETIRANIAYGKEGNA 1154

Query: 128  XXXXXXXXXXXXXXAKFIDKLPQGLDTLVGEHGTQLSGGQKQ 3
                           KFI  L QG DT VGE G QLSGGQKQ
Sbjct: 1155 TEAEISAAAELANAHKFISGLQQGYDTTVGERGIQLSGGQKQ 1196


>ref|XP_002320942.1| multidrug/pheromone exporter, MDR family, ABC transporter family
           [Populus trichocarpa] gi|222861715|gb|EEE99257.1|
           multidrug/pheromone exporter, MDR family, ABC
           transporter family [Populus trichocarpa]
          Length = 1294

 Score =  158 bits (400), Expect = 4e-37
 Identities = 79/102 (77%), Positives = 85/102 (83%)
 Frame = -1

Query: 308 VISLIERFYDPQAGEILIDGINLREFQLRWIREKIGLVGQEPVLFSSSIKDNIAYGKDGX 129
           VISLIERFYDPQAGE+LIDG NL+EFQL+WIREKIGLV QEPVLF+SSIKDNIAYGKDG 
Sbjct: 434 VISLIERFYDPQAGEVLIDGTNLKEFQLKWIREKIGLVSQEPVLFASSIKDNIAYGKDGA 493

Query: 128 XXXXXXXXXXXXXXAKFIDKLPQGLDTLVGEHGTQLSGGQKQ 3
                         AKFIDKLPQG+DT+VGEHGTQLSGGQKQ
Sbjct: 494 TTEEIRAATELANAAKFIDKLPQGIDTMVGEHGTQLSGGQKQ 535



 Score =  113 bits (283), Expect = 1e-23
 Identities = 56/103 (54%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
 Frame = -1

Query: 308  VISLIERFYDPQAGEILIDGINLREFQLRWIREKIGLVGQEPVLFSSSIKDNIAYGKDG- 132
            VISL++RFYDP +G I +DGI+++  QL+W+R+++GLV QEPVLF+ +I+ NIAYGK+G 
Sbjct: 1093 VISLLQRFYDPDSGHITLDGIDIQSLQLKWLRQQMGLVSQEPVLFNETIRANIAYGKEGN 1152

Query: 131  XXXXXXXXXXXXXXXAKFIDKLPQGLDTLVGEHGTQLSGGQKQ 3
                            KFI  L QG DT+VGE GTQLSGGQKQ
Sbjct: 1153 ATEAEILAASELANAHKFISGLQQGYDTVVGERGTQLSGGQKQ 1195


>ref|XP_002320941.1| multidrug/pheromone exporter, MDR family, ABC transporter family
           [Populus trichocarpa] gi|222861714|gb|EEE99256.1|
           multidrug/pheromone exporter, MDR family, ABC
           transporter family [Populus trichocarpa]
          Length = 620

 Score =  158 bits (400), Expect = 4e-37
 Identities = 78/102 (76%), Positives = 86/102 (84%)
 Frame = -1

Query: 308 VISLIERFYDPQAGEILIDGINLREFQLRWIREKIGLVGQEPVLFSSSIKDNIAYGKDGX 129
           VISL+ERFYDPQAGE+LIDGINL+EFQL+WIREKIGLV QEPVLF+SSI+DNIAYGKDG 
Sbjct: 444 VISLLERFYDPQAGEVLIDGINLKEFQLKWIREKIGLVSQEPVLFTSSIRDNIAYGKDGA 503

Query: 128 XXXXXXXXXXXXXXAKFIDKLPQGLDTLVGEHGTQLSGGQKQ 3
                         AKFIDKLPQGLDT+VGEHGTQ+SGGQKQ
Sbjct: 504 TTEEIRAVAELANAAKFIDKLPQGLDTMVGEHGTQMSGGQKQ 545


>dbj|BAB62040.1| CjMDR1 [Coptis japonica]
          Length = 1289

 Score =  157 bits (398), Expect = 6e-37
 Identities = 78/102 (76%), Positives = 85/102 (83%)
 Frame = -1

Query: 308 VISLIERFYDPQAGEILIDGINLREFQLRWIREKIGLVGQEPVLFSSSIKDNIAYGKDGX 129
           VISLIERFYDPQAGE+LIDG+NL++FQLRWIR KIGLV QEPVLF+SSI+DNIAYGKDG 
Sbjct: 438 VISLIERFYDPQAGEVLIDGVNLKDFQLRWIRGKIGLVSQEPVLFASSIRDNIAYGKDGA 497

Query: 128 XXXXXXXXXXXXXXAKFIDKLPQGLDTLVGEHGTQLSGGQKQ 3
                         +KFIDKLPQGLDTLVGEHGTQLSGGQKQ
Sbjct: 498 TVEEIKAATERANASKFIDKLPQGLDTLVGEHGTQLSGGQKQ 539



 Score =  112 bits (281), Expect = 2e-23
 Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
 Frame = -1

Query: 308  VISLIERFYDPQAGEILIDGINLREFQLRWIREKIGLVGQEPVLFSSSIKDNIAYGKDG- 132
            VISL++RFYDP +G I +DGI +++FQLRW+R ++GLV QEPVLF+ +I+ NIAYGK+G 
Sbjct: 1090 VISLLQRFYDPDSGHITLDGIEIQKFQLRWLRLQMGLVSQEPVLFNETIRANIAYGKEGD 1149

Query: 131  XXXXXXXXXXXXXXXAKFIDKLPQGLDTLVGEHGTQLSGGQKQ 3
                            KFI  L QG DT+VGE G QLSGGQKQ
Sbjct: 1150 ATETEILAAAELANAHKFISGLQQGYDTVVGERGIQLSGGQKQ 1192


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