BLASTX nr result

ID: Coptis23_contig00025927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025927
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001044526.1| Os01g0799000 [Oryza sativa Japonica Group] g...   116   2e-24
ref|XP_002325848.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
ref|XP_003564402.1| PREDICTED: disease resistance RPP13-like pro...   113   1e-23
gb|EEC73372.1| hypothetical protein OsI_07606 [Oryza sativa Indi...   110   1e-22
emb|CBI34023.3| unnamed protein product [Vitis vinifera]              109   2e-22

>ref|NP_001044526.1| Os01g0799000 [Oryza sativa Japonica Group]
           gi|20804725|dbj|BAB92411.1| NBS-LRR resistance protein
           RGH1-like [Oryza sativa Japonica Group]
           gi|113534057|dbj|BAF06440.1| Os01g0799000 [Oryza sativa
           Japonica Group] gi|125528035|gb|EAY76149.1| hypothetical
           protein OsI_04081 [Oryza sativa Indica Group]
           gi|125572320|gb|EAZ13835.1| hypothetical protein
           OsJ_03759 [Oryza sativa Japonica Group]
          Length = 627

 Score =  116 bits (291), Expect = 2e-24
 Identities = 63/146 (43%), Positives = 82/146 (56%), Gaps = 1/146 (0%)
 Frame = +2

Query: 2   LDLRSCQNLEKLGEEIRCLSKLTHLDVSECYLLDHMPKALGSLSQLEVLKGFVIGSKRSK 181
           LDL +C NLE+L E I  L  LTHLDVSECYLL+ MP+ +G L++L+VLKGFVIG   S 
Sbjct: 386 LDLHACHNLERLTESITSLQMLTHLDVSECYLLEGMPRGIGLLTELQVLKGFVIGGSTSN 445

Query: 182 DPCXXXXXXXXXXXXXXSISIGGEANIHTKDMTKFKEIDSLLSLAITWG-KLSQTLDDED 358
             C              S+ IG +  +   ++ + + I  L SL ITW   +     D+ 
Sbjct: 446 YNCRVAELVRLEKLNKLSVYIGSKVAVTGDELNELENIKGLRSLTITWAVSVLSKGKDQQ 505

Query: 359 RNTLKDNWTKLSYPPGLEKLDLRCFP 436
            +      T LS PP L+KLDLRCFP
Sbjct: 506 ASVATAMLTSLSLPPNLKKLDLRCFP 531


>ref|XP_002325848.1| predicted protein [Populus trichocarpa] gi|222862723|gb|EEF00230.1|
           predicted protein [Populus trichocarpa]
          Length = 716

 Score =  114 bits (285), Expect = 8e-24
 Identities = 66/151 (43%), Positives = 91/151 (60%), Gaps = 4/151 (2%)
 Frame = +2

Query: 2   LDLRSCQNLEKLGEEIRCLSKLTHLDVSECYLLDHMPKALGSLSQLEVLKGFVIGSKRSK 181
           LDL++C NLE+L  EI  L+ LTHLDVS+C  L+ MPK L  L++L+VLKGFVIG+ + +
Sbjct: 411 LDLKACHNLEELPSEIGSLTSLTHLDVSDCPFLESMPKELQKLTRLQVLKGFVIGNSK-R 469

Query: 182 DPCXXXXXXXXXXXXXXSISIGGEANIHTKDMTKFKEIDSLLSLAITWG-KLSQTLDD-- 352
            PC              SI IG EA +   ++ K K I+ L  L + WG K+S    +  
Sbjct: 470 TPCKIADLADMKELKRLSIYIGNEAVVKEGELAKLKAIEKLRCLTMWWGVKVSLKTSEGK 529

Query: 353 -EDRNTLKDNWTKLSYPPGLEKLDLRCFPEQ 442
            E+++      T LS+PPGLEKLDLR  P++
Sbjct: 530 TEEKSPKLTALTDLSFPPGLEKLDLRGIPQE 560


>ref|XP_003564402.1| PREDICTED: disease resistance RPP13-like protein 4-like
           [Brachypodium distachyon]
          Length = 625

 Score =  113 bits (283), Expect = 1e-23
 Identities = 64/146 (43%), Positives = 82/146 (56%), Gaps = 1/146 (0%)
 Frame = +2

Query: 2   LDLRSCQNLEKLGEEIRCLSKLTHLDVSECYLLDHMPKALGSLSQLEVLKGFVIGSKRSK 181
           LDL +C NLE+L E I  L  LTHLDVSECYLL+ MP+ +G L++L+VLKGFVIG     
Sbjct: 386 LDLHACHNLERLTESITSLQLLTHLDVSECYLLEGMPRGIGLLAELQVLKGFVIGGSIGN 445

Query: 182 DPCXXXXXXXXXXXXXXSISIGGEANIHTKDMTKFKEIDSLLSLAITWG-KLSQTLDDED 358
             C              SI IG +  +   ++ + + I +L  L ITW   LS+    + 
Sbjct: 446 SNCRVAELVRLDKLKKLSIYIGSKVLVTEDELNEVENIKALRVLTITWAVLLSKKGAGQQ 505

Query: 359 RNTLKDNWTKLSYPPGLEKLDLRCFP 436
            +      T LS PP LEKLDLRCFP
Sbjct: 506 DSAATTLLTSLSLPPHLEKLDLRCFP 531


>gb|EEC73372.1| hypothetical protein OsI_07606 [Oryza sativa Indica Group]
          Length = 1098

 Score =  110 bits (275), Expect = 1e-22
 Identities = 61/161 (37%), Positives = 90/161 (55%), Gaps = 14/161 (8%)
 Frame = +2

Query: 2    LDLRSCQNLEK-LGEEIRCLSKLTHLDVSECYLLDHMPKALGSLSQLEVLKGFVIG---- 166
            LD+R CQNL + +   +R L +LTHLD++ECY+L+H+   + SLS+L+V KGFV G    
Sbjct: 698  LDVRGCQNLTRVMSSTVRNLRQLTHLDLTECYMLEHIGSEIISLSELQVFKGFVFGIDAP 757

Query: 167  -----SKRSKDPCXXXXXXXXXXXXXXSISIGGEANIHTKDMTKFKEIDSLLSLAITWGK 331
                   R    C              SI++  +AN+   DM + K ++SL SL ITWG+
Sbjct: 758  RRKAFQCRDWHACHLQDLKVMKNLQKLSINVTTDANVDKIDMGQLKHLESLQSLTITWGE 817

Query: 332  LSQTLD----DEDRNTLKDNWTKLSYPPGLEKLDLRCFPEQ 442
            L   L     ++++N L + WT L  P  L KLD+RC+P +
Sbjct: 818  LPSILTSAEREKEKNQLLERWTSLVLPSSLVKLDVRCYPRE 858


>emb|CBI34023.3| unnamed protein product [Vitis vinifera]
          Length = 629

 Score =  109 bits (273), Expect = 2e-22
 Identities = 61/146 (41%), Positives = 81/146 (55%)
 Frame = +2

Query: 2   LDLRSCQNLEKLGEEIRCLSKLTHLDVSECYLLDHMPKALGSLSQLEVLKGFVIGSKRSK 181
           LDLR+C NLEKL  +I  L KLTHLD+SEC+LL+ MPK L  L+ L+VLKGFV+ + + +
Sbjct: 381 LDLRACHNLEKLPSDISALKKLTHLDISECHLLESMPKGLEELTSLQVLKGFVVATSK-R 439

Query: 182 DPCXXXXXXXXXXXXXXSISIGGEANIHTKDMTKFKEIDSLLSLAITWGKLSQTLDDEDR 361
            PC              SI I  EA  + +++ K ++   L  L+ITWG+       E  
Sbjct: 440 SPCKLEKLAVLDQLRKLSIYIRNEA--YMEELDKLRKFSKLRILSITWGERGAQGPKEQP 497

Query: 362 NTLKDNWTKLSYPPGLEKLDLRCFPE 439
                      +PP LEKLDL C PE
Sbjct: 498 GKQATESKPFPFPPKLEKLDLWCIPE 523


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