BLASTX nr result

ID: Coptis23_contig00025915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025915
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333838.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
emb|CBI39013.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002317679.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
gb|AGA82514.1| alpha-glucosidase [Camellia sinensis]                  128   4e-28
emb|CAN60336.1| hypothetical protein VITISV_043773 [Vitis vinifera]   128   5e-28

>ref|XP_002333838.1| predicted protein [Populus trichocarpa]
           gi|224117836|ref|XP_002317680.1| predicted protein
           [Populus trichocarpa] gi|222838706|gb|EEE77071.1|
           predicted protein [Populus trichocarpa]
           gi|222860745|gb|EEE98292.1| predicted protein [Populus
           trichocarpa]
          Length = 897

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/72 (84%), Positives = 67/72 (93%)
 Frame = +1

Query: 1   SKATNAALVEVTKKRPFVLSRSTFVGSGKYTAHWTGDNAASWDDLQYSIPAILNSGLFGI 180
           SKATNAAL+ VT KRPF+LSRSTFVGSGKYTAHWTGDNAA+WDDL Y+IP+ILN GLFGI
Sbjct: 520 SKATNAALINVTGKRPFILSRSTFVGSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGI 579

Query: 181 PMVGADICGFMR 216
           PMVG+DICGF R
Sbjct: 580 PMVGSDICGFSR 591


>emb|CBI39013.3| unnamed protein product [Vitis vinifera]
          Length = 1760

 Score =  129 bits (325), Expect = 2e-28
 Identities = 59/70 (84%), Positives = 65/70 (92%)
 Frame = +1

Query: 1   SKATNAALVEVTKKRPFVLSRSTFVGSGKYTAHWTGDNAASWDDLQYSIPAILNSGLFGI 180
           SKATNAAL ++T KRPF+L+RSTFVGSGKY AHWTGDNAA+WDDL YSIPA+LN GLFGI
Sbjct: 494 SKATNAALTKLTGKRPFILTRSTFVGSGKYAAHWTGDNAATWDDLAYSIPAVLNFGLFGI 553

Query: 181 PMVGADICGF 210
           PMVGADICGF
Sbjct: 554 PMVGADICGF 563



 Score =  129 bits (325), Expect = 2e-28
 Identities = 59/70 (84%), Positives = 65/70 (92%)
 Frame = +1

Query: 1    SKATNAALVEVTKKRPFVLSRSTFVGSGKYTAHWTGDNAASWDDLQYSIPAILNSGLFGI 180
            SKATNAAL ++T KRPF+L+RSTFVGSGKY AHWTGDNAA+WDDL YSIPA+LN GLFGI
Sbjct: 1388 SKATNAALTKLTGKRPFILTRSTFVGSGKYAAHWTGDNAATWDDLAYSIPAVLNFGLFGI 1447

Query: 181  PMVGADICGF 210
            PMVGADICGF
Sbjct: 1448 PMVGADICGF 1457


>ref|XP_002317679.1| predicted protein [Populus trichocarpa] gi|222860744|gb|EEE98291.1|
           predicted protein [Populus trichocarpa]
          Length = 906

 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/73 (82%), Positives = 65/73 (89%)
 Frame = +1

Query: 1   SKATNAALVEVTKKRPFVLSRSTFVGSGKYTAHWTGDNAASWDDLQYSIPAILNSGLFGI 180
           S+ATNA L   T KRPFVLSRSTFVGSGKYTAHWTGDNAA+WDDL Y+IP+ILN GLFGI
Sbjct: 529 SEATNAGLKNATGKRPFVLSRSTFVGSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGI 588

Query: 181 PMVGADICGFMRE 219
           PMVGADICGF R+
Sbjct: 589 PMVGADICGFSRD 601


>gb|AGA82514.1| alpha-glucosidase [Camellia sinensis]
          Length = 924

 Score =  128 bits (322), Expect = 4e-28
 Identities = 60/70 (85%), Positives = 65/70 (92%)
 Frame = +1

Query: 1   SKATNAALVEVTKKRPFVLSRSTFVGSGKYTAHWTGDNAASWDDLQYSIPAILNSGLFGI 180
           SKATNAALV VT KRPF+LSRSTFVGSGKYTAHWTGDNAA+W+DL YSIP IL+ GL+GI
Sbjct: 541 SKATNAALVGVTGKRPFILSRSTFVGSGKYTAHWTGDNAATWEDLAYSIPGILSFGLYGI 600

Query: 181 PMVGADICGF 210
           PMVGADICGF
Sbjct: 601 PMVGADICGF 610


>emb|CAN60336.1| hypothetical protein VITISV_043773 [Vitis vinifera]
          Length = 891

 Score =  128 bits (321), Expect = 5e-28
 Identities = 58/70 (82%), Positives = 64/70 (91%)
 Frame = +1

Query: 1   SKATNAALVEVTKKRPFVLSRSTFVGSGKYTAHWTGDNAASWDDLQYSIPAILNSGLFGI 180
           SKATN AL ++T KRPF+L+RSTFVGSGKY AHWTGDNAA+WDDL YSIPA+LN GLFGI
Sbjct: 512 SKATNTALTKLTGKRPFILTRSTFVGSGKYAAHWTGDNAATWDDLAYSIPAVLNFGLFGI 571

Query: 181 PMVGADICGF 210
           PMVGADICGF
Sbjct: 572 PMVGADICGF 581


Top