BLASTX nr result

ID: Coptis23_contig00025913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025913
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263569.2| PREDICTED: probable LRR receptor-like serine...   169   2e-40
ref|XP_002527087.1| Leucine-rich repeat receptor protein kinase ...   162   3e-38
ref|XP_003535558.1| PREDICTED: probable LRR receptor-like serine...   157   8e-37
gb|ACM89593.1| leucine-rich repeat transmembrane protein kinase ...   157   8e-37
ref|XP_002302156.1| predicted protein [Populus trichocarpa] gi|2...   154   5e-36

>ref|XP_002263569.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g34110-like [Vitis vinifera]
          Length = 1060

 Score =  169 bits (429), Expect = 2e-40
 Identities = 82/115 (71%), Positives = 92/115 (80%)
 Frame = -1

Query: 392  GLTCSSGSARRSGLKSAKTVTLISVTLASFIMVVLASWIVIARNRRYLAEKXXXXXXXXS 213
            G TCSSG ARR+G+KSAKT  LI V LAS IM V+ASWI++ RN +Y+ EK        S
Sbjct: 676  GYTCSSGLARRNGMKSAKTAALICVILASVIMSVIASWILVTRNHKYMVEKSSGTSASSS 735

Query: 212  GTEDFSYPWTFIPFQKFNFTIDDILACLKDENVIGKGCSGIVYKAELPNGEYIAV 48
            G EDFSYPWTFIPFQK NFTID+IL CLKDENVIGKGCSG+VYKAE+PNGE IAV
Sbjct: 736  GAEDFSYPWTFIPFQKLNFTIDNILDCLKDENVIGKGCSGVVYKAEMPNGELIAV 790


>ref|XP_002527087.1| Leucine-rich repeat receptor protein kinase EXS precursor, putative
            [Ricinus communis] gi|223533510|gb|EEF35250.1|
            Leucine-rich repeat receptor protein kinase EXS
            precursor, putative [Ricinus communis]
          Length = 1075

 Score =  162 bits (409), Expect = 3e-38
 Identities = 77/115 (66%), Positives = 90/115 (78%)
 Frame = -1

Query: 392  GLTCSSGSARRSGLKSAKTVTLISVTLASFIMVVLASWIVIARNRRYLAEKXXXXXXXXS 213
            GLTCSS   RR+GLKSAKTV LISV LAS  + V+A WI++ RN RY+ EK         
Sbjct: 696  GLTCSSRLIRRNGLKSAKTVALISVILASVTIAVIALWILLTRNHRYMVEKSSGASASSP 755

Query: 212  GTEDFSYPWTFIPFQKFNFTIDDILACLKDENVIGKGCSGIVYKAELPNGEYIAV 48
            G EDFSYPWTFIPFQK +FT+D+IL CL+DENVIGKGCSG+VYKAE+PNG+ IAV
Sbjct: 756  GAEDFSYPWTFIPFQKLHFTVDNILDCLRDENVIGKGCSGVVYKAEMPNGDLIAV 810


>ref|XP_003535558.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g34110-like [Glycine max]
          Length = 1081

 Score =  157 bits (397), Expect = 8e-37
 Identities = 73/115 (63%), Positives = 90/115 (78%)
 Frame = -1

Query: 392  GLTCSSGSARRSGLKSAKTVTLISVTLASFIMVVLASWIVIARNRRYLAEKXXXXXXXXS 213
            G TCSS   R++GLKSAKT+ L++V LAS  +++++SWI++ RN  Y  EK        S
Sbjct: 697  GTTCSSSMIRKNGLKSAKTIALVTVILASVTIILISSWILVTRNHGYRVEKTLGASTSTS 756

Query: 212  GTEDFSYPWTFIPFQKFNFTIDDILACLKDENVIGKGCSGIVYKAELPNGEYIAV 48
            G EDFSYPWTFIPFQK NF+ID+IL CL+DENVIGKGCSG+VYKAE+PNGE IAV
Sbjct: 757  GAEDFSYPWTFIPFQKINFSIDNILDCLRDENVIGKGCSGVVYKAEMPNGELIAV 811


>gb|ACM89593.1| leucine-rich repeat transmembrane protein kinase [Glycine max]
          Length = 979

 Score =  157 bits (397), Expect = 8e-37
 Identities = 73/115 (63%), Positives = 90/115 (78%)
 Frame = -1

Query: 392 GLTCSSGSARRSGLKSAKTVTLISVTLASFIMVVLASWIVIARNRRYLAEKXXXXXXXXS 213
           G TCSS   R++GLKSAKT+ L++V LAS  +++++SWI++ RN  Y  EK        S
Sbjct: 595 GTTCSSSMIRKNGLKSAKTIALVTVILASVTIILISSWILVTRNHGYRVEKTLGASTSTS 654

Query: 212 GTEDFSYPWTFIPFQKFNFTIDDILACLKDENVIGKGCSGIVYKAELPNGEYIAV 48
           G EDFSYPWTFIPFQK NF+ID+IL CL+DENVIGKGCSG+VYKAE+PNGE IAV
Sbjct: 655 GAEDFSYPWTFIPFQKINFSIDNILDCLRDENVIGKGCSGVVYKAEMPNGELIAV 709


>ref|XP_002302156.1| predicted protein [Populus trichocarpa] gi|222843882|gb|EEE81429.1|
            predicted protein [Populus trichocarpa]
          Length = 941

 Score =  154 bits (390), Expect = 5e-36
 Identities = 75/115 (65%), Positives = 89/115 (77%)
 Frame = -1

Query: 392  GLTCSSGSARRSGLKSAKTVTLISVTLASFIMVVLASWIVIARNRRYLAEKXXXXXXXXS 213
            G +CSS   +R+GLKSAKTV LI V LAS  ++V+AS +++ RN RY  EK        S
Sbjct: 680  GTSCSSRIVQRNGLKSAKTVALILVILASVTIIVIASLVIVVRNHRYAMEKSSGALTASS 739

Query: 212  GTEDFSYPWTFIPFQKFNFTIDDILACLKDENVIGKGCSGIVYKAELPNGEYIAV 48
            G EDFSYPWTFIPFQK NFT+D+IL CLK+ENVIGKGCSGIVYKAE+PNG+ IAV
Sbjct: 740  GAEDFSYPWTFIPFQKLNFTVDNILDCLKEENVIGKGCSGIVYKAEMPNGQLIAV 794


Top