BLASTX nr result

ID: Coptis23_contig00025909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025909
         (923 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304256.1| predicted protein [Populus trichocarpa] gi|2...   373   e-101
ref|XP_002532945.1| Pectinesterase-3 precursor, putative [Ricinu...   368   e-100
emb|CBI35795.3| unnamed protein product [Vitis vinifera]              365   1e-98
ref|XP_002265217.1| PREDICTED: pectinesterase 3 [Vitis vinifera]      365   1e-98
emb|CAN74214.1| hypothetical protein VITISV_034303 [Vitis vinifera]   365   1e-98

>ref|XP_002304256.1| predicted protein [Populus trichocarpa] gi|222841688|gb|EEE79235.1|
            predicted protein [Populus trichocarpa]
          Length = 588

 Score =  373 bits (957), Expect = e-101
 Identities = 179/267 (67%), Positives = 204/267 (76%), Gaps = 2/267 (0%)
 Frame = +1

Query: 1    NVVLDKSCWNIMMYGDGKAKTIVSGSLNVVDGTPTFSTAPFIVVGKGFIAKAMGFNNTAG 180
            NV+LDKS WN+M+YG+GK KTIVSGSLN VDGTPTFST  F V GKGF A+ M F NTAG
Sbjct: 322  NVILDKSKWNVMIYGEGKDKTIVSGSLNFVDGTPTFSTPTFAVAGKGFFARDMKFINTAG 381

Query: 181  PQKHQAVALRSASDQSVFYQCSFSAYQDTLYAHSNRQFYRECEITGTIDFIFGNAAVIFQ 360
             +KHQAVA RS SD SVFY+C+F A+QDTLYAHSNRQFYR+C+ITGTIDFIFGNAAV+FQ
Sbjct: 382  AEKHQAVAFRSGSDMSVFYRCAFDAFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQ 441

Query: 361  NCNIQPRQPLPNQFNTLTAQGKTDPNQNTGISIQGCTIAAFGNVTVNTYLGRPWKNFXXX 540
            NCNIQPRQPL NQFNT+TAQGK DPNQNTGISIQ C  +AF NVT  TYLGRPWK++   
Sbjct: 442  NCNIQPRQPLANQFNTITAQGKKDPNQNTGISIQKCKFSAFDNVTAPTYLGRPWKDYSTT 501

Query: 541  XXXXXXXXXXXXXXXWIPWVTNIKPASTIFYAEYQNTGPGSSVAQRVTWA--KPTATANE 714
                           WI WV+ + P +TIFYAEYQNTG G++V  RV W   KP  T +E
Sbjct: 502  VIMQSDIGSFLRPLGWISWVSGVDPPATIFYAEYQNTGSGANVDGRVKWTGYKPALTVDE 561

Query: 715  AAKFTVEPFIQGSQWLPQAGVTFTSAL 795
            A KF V+ FIQGS+WLP+  VTF S L
Sbjct: 562  AGKFAVDSFIQGSEWLPKTSVTFQSML 588


>ref|XP_002532945.1| Pectinesterase-3 precursor, putative [Ricinus communis]
            gi|223527274|gb|EEF29429.1| Pectinesterase-3 precursor,
            putative [Ricinus communis]
          Length = 589

 Score =  368 bits (945), Expect = e-100
 Identities = 176/268 (65%), Positives = 204/268 (76%), Gaps = 3/268 (1%)
 Frame = +1

Query: 1    NVVLDKSCWNIMMYGDGKAKTIVSGSLNVVDGTPTFSTAPFIVVGKGFIAKAMGFNNTAG 180
            N+++DK  WN+M+YGDGK KTI+SGS N VDGTPTFSTA F V GKGF+A+ + F NTAG
Sbjct: 322  NILMDKHKWNVMIYGDGKDKTIISGSTNFVDGTPTFSTATFAVAGKGFMARDIKFINTAG 381

Query: 181  PQKHQAVALRSASDQSVFYQCSFSAYQDTLYAHSNRQFYRECEITGTIDFIFGNAAVIFQ 360
              KHQAVA RS SD SV++QCSF AYQDTLYAHSNRQFYR+C+ITGTIDFIFGNAAV+FQ
Sbjct: 382  AAKHQAVAFRSGSDMSVYFQCSFDAYQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQ 441

Query: 361  NCNIQPRQPLPNQFNTLTAQGKTDPNQNTGISIQGCTIAAFG-NVTVNTYLGRPWKNFXX 537
            NCNI PRQPLPNQFNT+TAQGK DPNQNTGISIQ C   AFG N+T +TYLGRPWKNF  
Sbjct: 442  NCNIMPRQPLPNQFNTITAQGKKDPNQNTGISIQKCKFYAFGPNLTASTYLGRPWKNFST 501

Query: 538  XXXXXXXXXXXXXXXXWIPWVTNIKPASTIFYAEYQNTGPGSSVAQRVTWA--KPTATAN 711
                            W+ WV+ I P S+IFY EYQNTGPGS++ +R+ W   KP+ T  
Sbjct: 502  TVIMQSNIDSFLNPLGWMSWVSGIDPPSSIFYGEYQNTGPGSAIEKRIQWVGYKPSLTEV 561

Query: 712  EAAKFTVEPFIQGSQWLPQAGVTFTSAL 795
            EA KF+V  FIQG+ WLP   VTF S+L
Sbjct: 562  EAGKFSVGSFIQGTDWLPATSVTFDSSL 589


>emb|CBI35795.3| unnamed protein product [Vitis vinifera]
          Length = 670

 Score =  365 bits (936), Expect = 1e-98
 Identities = 175/267 (65%), Positives = 203/267 (76%), Gaps = 2/267 (0%)
 Frame = +1

Query: 1    NVVLDKSCWNIMMYGDGKAKTIVSGSLNVVDGTPTFSTAPFIVVGKGFIAKAMGFNNTAG 180
            N++LDKS WN+M+YGDGK K+IVSG+LN +DGTPTF+TA F  VGKGFIAK M F NTAG
Sbjct: 404  NIILDKSKWNVMIYGDGKDKSIVSGNLNFIDGTPTFATATFAAVGKGFIAKYMRFENTAG 463

Query: 181  PQKHQAVALRSASDQSVFYQCSFSAYQDTLYAHSNRQFYRECEITGTIDFIFGNAAVIFQ 360
              KHQAVA RS SD SVFYQCSF A+QDTLYAHSNRQFYREC+ITGTIDFIFGNAAV+FQ
Sbjct: 464  AAKHQAVAFRSGSDMSVFYQCSFDAFQDTLYAHSNRQFYRECDITGTIDFIFGNAAVVFQ 523

Query: 361  NCNIQPRQPLPNQFNTLTAQGKTDPNQNTGISIQGCTIAAFGNVTVNTYLGRPWKNFXXX 540
             C IQPRQP+ NQFNT+TAQGK DPNQNTGISIQ C+I+A   +T  TYLGRPWK +   
Sbjct: 524  ACKIQPRQPMSNQFNTITAQGKKDPNQNTGISIQKCSISALNTLTAPTYLGRPWKAYSTT 583

Query: 541  XXXXXXXXXXXXXXXWIPWVTNIKPASTIFYAEYQNTGPGSSVAQRVTWA--KPTATANE 714
                           W  WVT + P STIFYAE+QNTGPG+++ QRV WA      T +E
Sbjct: 584  IVMQSNIGSFLNPKGWTEWVTGVDPPSTIFYAEFQNTGPGATLDQRVKWAGFMTNITEDE 643

Query: 715  AAKFTVEPFIQGSQWLPQAGVTFTSAL 795
            AAKFTV  FIQG+ WL ++ VTF ++L
Sbjct: 644  AAKFTVGTFIQGASWLSESSVTFDASL 670



 Score =  256 bits (654), Expect = 5e-66
 Identities = 132/261 (50%), Positives = 164/261 (62%), Gaps = 7/261 (2%)
 Frame = +1

Query: 34  MMYGDGKAKTIVSGSLNVVDGTPTFSTAPFIVVGKGFIAKAMGFNNTAGPQKHQAVALRS 213
           M  GDG++ TI++GS NVVDG+ TF++A   VVG+ FIA+ + F NTAGP KHQAVALR 
Sbjct: 1   MFLGDGRSNTIITGSKNVVDGSTTFNSATVAVVGEKFIARDITFQNTAGPSKHQAVALRV 60

Query: 214 ASDQSVFYQCSFSAYQDTLYAHSNRQFYRECEITGTIDFIFGNAAVIFQNCNIQPRQPLP 393
            SD S FY+C   AYQDTLY HSNRQFY  C + GT+DFIFGNAA +FQ+C+I  R+P  
Sbjct: 61  GSDLSAFYKCDMLAYQDTLYVHSNRQFYINCLVAGTVDFIFGNAAAVFQDCDIHARRPNS 120

Query: 394 NQFNTLTAQGKTDPNQNTGISIQGCTIAAFGNV-----TVNTYLGRPWKNFXXXXXXXXX 558
            Q N LTAQG+TDPNQNTGI IQ C I A  ++     +  TYLGRPWK +         
Sbjct: 121 GQKNMLTAQGRTDPNQNTGIVIQKCRIGATSDLQAVISSFKTYLGRPWKEYSRTVVMQTS 180

Query: 559 XXXXXXXXXWIPWVTNIKPASTIFYAEYQNTGPGSSVAQRVTWA--KPTATANEAAKFTV 732
                    W  W  +    ST++Y EYQNTG G+  ++RVTW   K   +A+EA  FT 
Sbjct: 181 ITNVIDPAGWHEWSGSF-ALSTLYYGEYQNTGAGAGTSKRVTWKGFKVITSASEAQGFTP 239

Query: 733 EPFIQGSQWLPQAGVTFTSAL 795
             FI GS WL   G  ++  L
Sbjct: 240 GTFIAGSSWLGSTGFPYSLGL 260


>ref|XP_002265217.1| PREDICTED: pectinesterase 3 [Vitis vinifera]
          Length = 578

 Score =  365 bits (936), Expect = 1e-98
 Identities = 175/267 (65%), Positives = 203/267 (76%), Gaps = 2/267 (0%)
 Frame = +1

Query: 1    NVVLDKSCWNIMMYGDGKAKTIVSGSLNVVDGTPTFSTAPFIVVGKGFIAKAMGFNNTAG 180
            N++LDKS WN+M+YGDGK K+IVSG+LN +DGTPTF+TA F  VGKGFIAK M F NTAG
Sbjct: 312  NIILDKSKWNVMIYGDGKDKSIVSGNLNFIDGTPTFATATFAAVGKGFIAKYMRFENTAG 371

Query: 181  PQKHQAVALRSASDQSVFYQCSFSAYQDTLYAHSNRQFYRECEITGTIDFIFGNAAVIFQ 360
              KHQAVA RS SD SVFYQCSF A+QDTLYAHSNRQFYREC+ITGTIDFIFGNAAV+FQ
Sbjct: 372  AAKHQAVAFRSGSDMSVFYQCSFDAFQDTLYAHSNRQFYRECDITGTIDFIFGNAAVVFQ 431

Query: 361  NCNIQPRQPLPNQFNTLTAQGKTDPNQNTGISIQGCTIAAFGNVTVNTYLGRPWKNFXXX 540
             C IQPRQP+ NQFNT+TAQGK DPNQNTGISIQ C+I+A   +T  TYLGRPWK +   
Sbjct: 432  ACKIQPRQPMSNQFNTITAQGKKDPNQNTGISIQKCSISALNTLTAPTYLGRPWKAYSTT 491

Query: 541  XXXXXXXXXXXXXXXWIPWVTNIKPASTIFYAEYQNTGPGSSVAQRVTWA--KPTATANE 714
                           W  WVT + P STIFYAE+QNTGPG+++ QRV WA      T +E
Sbjct: 492  IVMQSNIGSFLNPKGWTEWVTGVDPPSTIFYAEFQNTGPGATLDQRVKWAGFMTNITEDE 551

Query: 715  AAKFTVEPFIQGSQWLPQAGVTFTSAL 795
            AAKFTV  FIQG+ WL ++ VTF ++L
Sbjct: 552  AAKFTVGTFIQGASWLSESSVTFDASL 578


>emb|CAN74214.1| hypothetical protein VITISV_034303 [Vitis vinifera]
          Length = 288

 Score =  365 bits (936), Expect = 1e-98
 Identities = 175/267 (65%), Positives = 203/267 (76%), Gaps = 2/267 (0%)
 Frame = +1

Query: 1   NVVLDKSCWNIMMYGDGKAKTIVSGSLNVVDGTPTFSTAPFIVVGKGFIAKAMGFNNTAG 180
           N++LDKS WN+M+YGDGK K+IVSG+LN +DGTPTF+TA F  VGKGFIAK M F NTAG
Sbjct: 22  NIILDKSKWNVMIYGDGKDKSIVSGNLNFIDGTPTFATATFAAVGKGFIAKYMRFENTAG 81

Query: 181 PQKHQAVALRSASDQSVFYQCSFSAYQDTLYAHSNRQFYRECEITGTIDFIFGNAAVIFQ 360
             KHQAVA RS SD SVFYQCSF A+QDTLYAHSNRQFYREC+ITGTIDFIFGNAAV+FQ
Sbjct: 82  AAKHQAVAFRSGSDMSVFYQCSFDAFQDTLYAHSNRQFYRECDITGTIDFIFGNAAVVFQ 141

Query: 361 NCNIQPRQPLPNQFNTLTAQGKTDPNQNTGISIQGCTIAAFGNVTVNTYLGRPWKNFXXX 540
            C IQPRQP+ NQFNT+TAQGK DPNQNTGISIQ C+I+A   +T  TYLGRPWK +   
Sbjct: 142 ACKIQPRQPMSNQFNTITAQGKKDPNQNTGISIQKCSISALNTLTAPTYLGRPWKAYSTT 201

Query: 541 XXXXXXXXXXXXXXXWIPWVTNIKPASTIFYAEYQNTGPGSSVAQRVTWA--KPTATANE 714
                          W  WVT + P STIFYAE+QNTGPG+++ QRV WA      T +E
Sbjct: 202 IVMQSNIGSFLNPKGWTEWVTGVDPPSTIFYAEFQNTGPGATLDQRVKWAGFMTNITEDE 261

Query: 715 AAKFTVEPFIQGSQWLPQAGVTFTSAL 795
           AAKFTV  FIQG+ WL ++ VTF ++L
Sbjct: 262 AAKFTVGTFIQGTSWLSESSVTFDASL 288


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