BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025908
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...    91   1e-16
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...    89   3e-16
ref|XP_002522932.1| conserved hypothetical protein [Ricinus comm...    89   5e-16
gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago ...    82   5e-14
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...    79   4e-13

>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 38/89 (42%), Positives = 60/89 (67%)
 Frame = +1

Query: 1   IKSVLSSIPIYNMSIYKWPASLIKEAETVMRNFLWSGDPMVKKSITVSWDKCCKSINEGG 180
           +KSV+ S+ ++ MSIY WP  ++KE E  ++NF+WSGD   +K +TV+W K C    EGG
Sbjct: 539 VKSVVQSMLVHTMSIYSWPIKILKEMEKWIKNFIWSGDVTKRKMVTVAWRKICADYEEGG 598

Query: 181 LGLKTLKEVNLCMLMKLGWQILNGDEEFA 267
           LG+K+L  +N    +K+ W ++  DE++A
Sbjct: 599 LGVKSLICLNEATNLKICWNLMQSDEQWA 627


>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 39/83 (46%), Positives = 59/83 (71%)
 Frame = +1

Query: 1   IKSVLSSIPIYNMSIYKWPASLIKEAETVMRNFLWSGDPMVKKSITVSWDKCCKSINEGG 180
           IKSV  S+ I+ ++IY WP+ L+KE ET  RNF+WSGD   +K +TV+W K CK  ++GG
Sbjct: 445 IKSVAQSMLIHTITIYDWPSFLLKELETCFRNFIWSGDITKRKLVTVAWKKLCKPQSQGG 504

Query: 181 LGLKTLKEVNLCMLMKLGWQILN 249
           LG+++L ++N    +KL W +L+
Sbjct: 505 LGIRSLSQLNAAGNLKLCWDMLH 527


>ref|XP_002522932.1| conserved hypothetical protein [Ricinus communis]
           gi|223537826|gb|EEF39443.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 303

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 37/85 (43%), Positives = 55/85 (64%)
 Frame = +1

Query: 1   IKSVLSSIPIYNMSIYKWPASLIKEAETVMRNFLWSGDPMVKKSITVSWDKCCKSINEGG 180
           I SV+ +  ++   +Y+WP+SL+K  E  +RNFLW+G    KK +TV W  CCK I+EGG
Sbjct: 180 INSVIFASLLHTFMMYRWPSSLLKSIEKAIRNFLWTGSVSYKKLVTVKWGHCCKPISEGG 239

Query: 181 LGLKTLKEVNLCMLMKLGWQILNGD 255
           +GLK L  +N  ML ++ W+  + D
Sbjct: 240 IGLKRLDVLNRTMLCRIAWKFYSND 264


>gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago truncatula]
          Length = 161

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 32/81 (39%), Positives = 57/81 (70%)
 Frame = +1

Query: 1   IKSVLSSIPIYNMSIYKWPASLIKEAETVMRNFLWSGDPMVKKSITVSWDKCCKSINEGG 180
           +KSV+ S+  +++++Y WP SL+K+ E  ++NF+WSGD   +K +TV+W K C+  ++GG
Sbjct: 80  VKSVIQSMLTHSITVYNWPTSLLKDLEKSIKNFIWSGDTSKRKLVTVAWKKLCRPFDQGG 139

Query: 181 LGLKTLKEVNLCMLMKLGWQI 243
           L +++L ++N    +KL W I
Sbjct: 140 LRIRSLIQLNSASNLKLCWNI 160


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 37/82 (45%), Positives = 53/82 (64%)
 Frame = +1

Query: 4   KSVLSSIPIYNMSIYKWPASLIKEAETVMRNFLWSGDPMVKKSITVSWDKCCKSINEGGL 183
           K+VL SIPI+ MS    PASL+++ + V RNFLW      +K   +SW K C+    GGL
Sbjct: 592 KAVLMSIPIHTMSSILLPASLLEQLDKVSRNFLWGSTVEKRKQHLLSWKKVCRPKAAGGL 651

Query: 184 GLKTLKEVNLCMLMKLGWQILN 249
           GL+  K++N  +L K+GW++LN
Sbjct: 652 GLRASKDMNRALLAKVGWRLLN 673