BLASTX nr result

ID: Coptis23_contig00025906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025906
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002836130.1| ribosomal protein L22 [Megaleranthis sanicul...   189   3e-46
dbj|BAG06440.1| ribosomal protein L22 [Elaeagnus formosana]           183   1e-44
ref|YP_001019178.1| ribosomal protein L22 [Ranunculus macranthus...   183   1e-44
dbj|BAG06507.1| ribosomal protein L22 [Stauntonia hexaphylla]         180   9e-44
ref|YP_001671722.1| ribosomal protein L22 [Carica papaya] gi|215...   179   2e-43

>ref|YP_002836130.1| ribosomal protein L22 [Megaleranthis saniculifolia]
           gi|226933922|gb|ACO92055.1| ribosomal protein L22
           [Megaleranthis saniculifolia]
          Length = 177

 Score =  189 bits (479), Expect = 3e-46
 Identities = 94/98 (95%), Positives = 95/98 (96%)
 Frame = -3

Query: 295 DVEVYALGQQIRMSAHKARRVIDQIRGRPYEETLMILELMPYRACYPIFKLIYSAAANAS 116
           DVEVYALGQ IRMSAHKARRVIDQIRGRPYEETLMILELMPYRACYPIFKL+YSAAANA 
Sbjct: 7   DVEVYALGQHIRMSAHKARRVIDQIRGRPYEETLMILELMPYRACYPIFKLVYSAAANAR 66

Query: 115 HNMGFNETALIISQAEVNEGTIMKKLKPRARGRSYPIK 2
           HNMGFNETALIISQAEVNEGTIMKKLKPRARGRSY IK
Sbjct: 67  HNMGFNETALIISQAEVNEGTIMKKLKPRARGRSYAIK 104


>dbj|BAG06440.1| ribosomal protein L22 [Elaeagnus formosana]
          Length = 179

 Score =  183 bits (464), Expect = 1e-44
 Identities = 91/98 (92%), Positives = 94/98 (95%)
 Frame = -3

Query: 295 DVEVYALGQQIRMSAHKARRVIDQIRGRPYEETLMILELMPYRACYPIFKLIYSAAANAS 116
           DVEVYALG+ IRMSAHKARRVIDQIRGRPYEETLMILELMPYRACYPI KL+YSAAANAS
Sbjct: 7   DVEVYALGKHIRMSAHKARRVIDQIRGRPYEETLMILELMPYRACYPILKLVYSAAANAS 66

Query: 115 HNMGFNETALIISQAEVNEGTIMKKLKPRARGRSYPIK 2
           HNMGFNETALIISQAEVNEGTI KKLKPRARGRS+ IK
Sbjct: 67  HNMGFNETALIISQAEVNEGTITKKLKPRARGRSFAIK 104


>ref|YP_001019178.1| ribosomal protein L22 [Ranunculus macranthus]
           gi|215274766|sp|A2CHX2.1|RK22_RANMC RecName: Full=50S
           ribosomal protein L22, chloroplastic
           gi|124074980|gb|ABM90427.1| ribosomal protein L22
           [Ranunculus macranthus]
          Length = 179

 Score =  183 bits (464), Expect = 1e-44
 Identities = 91/98 (92%), Positives = 94/98 (95%)
 Frame = -3

Query: 295 DVEVYALGQQIRMSAHKARRVIDQIRGRPYEETLMILELMPYRACYPIFKLIYSAAANAS 116
           DVEVYALG+ IRMSAHKARRVIDQIRGRPYEETLMILELMPYRACYPI KL+YSAAANAS
Sbjct: 7   DVEVYALGKHIRMSAHKARRVIDQIRGRPYEETLMILELMPYRACYPILKLVYSAAANAS 66

Query: 115 HNMGFNETALIISQAEVNEGTIMKKLKPRARGRSYPIK 2
           HNMGFNETALIISQAEVNEGTI KKLKPRARGRS+ IK
Sbjct: 67  HNMGFNETALIISQAEVNEGTITKKLKPRARGRSFAIK 104


>dbj|BAG06507.1| ribosomal protein L22 [Stauntonia hexaphylla]
          Length = 168

 Score =  180 bits (457), Expect = 9e-44
 Identities = 89/98 (90%), Positives = 93/98 (94%)
 Frame = -3

Query: 295 DVEVYALGQQIRMSAHKARRVIDQIRGRPYEETLMILELMPYRACYPIFKLIYSAAANAS 116
           DVEVYALGQ IRMSAHKARRVIDQIRGR YEETLMILELMPYRACYPIFKL+YSAAANAS
Sbjct: 7   DVEVYALGQHIRMSAHKARRVIDQIRGRSYEETLMILELMPYRACYPIFKLVYSAAANAS 66

Query: 115 HNMGFNETALIISQAEVNEGTIMKKLKPRARGRSYPIK 2
           HNMGFNE  LIIS+AEVN GTI+K+LKPRARGRSYPIK
Sbjct: 67  HNMGFNEADLIISKAEVNRGTIVKRLKPRARGRSYPIK 104


>ref|YP_001671722.1| ribosomal protein L22 [Carica papaya]
           gi|215274736|sp|B1A974.1|RK22_CARPA RecName: Full=50S
           ribosomal protein L22, chloroplastic
           gi|166344172|gb|ABY86822.1| ribosomal protein L22
           [Carica papaya]
          Length = 142

 Score =  179 bits (454), Expect = 2e-43
 Identities = 86/98 (87%), Positives = 93/98 (94%)
 Frame = -3

Query: 295 DVEVYALGQQIRMSAHKARRVIDQIRGRPYEETLMILELMPYRACYPIFKLIYSAAANAS 116
           D +VYALGQ IRMSAHKARRVIDQIRGR YEETLMILELMPYRACYPIFKL+YSAAANAS
Sbjct: 10  DTKVYALGQHIRMSAHKARRVIDQIRGRSYEETLMILELMPYRACYPIFKLVYSAAANAS 69

Query: 115 HNMGFNETALIISQAEVNEGTIMKKLKPRARGRSYPIK 2
           HNMGFNET+L++S+AEVNEGT +KK KPRARGRSYPIK
Sbjct: 70  HNMGFNETSLVVSKAEVNEGTTVKKFKPRARGRSYPIK 107


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