BLASTX nr result

ID: Coptis23_contig00025901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025901
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28855.3| unnamed protein product [Vitis vinifera]              100   1e-19
ref|XP_002274227.1| PREDICTED: nitrate transporter 1.3-like [Vit...   100   1e-19
ref|XP_002525323.1| oligopeptide transporter, putative [Ricinus ...    97   1e-18
ref|XP_003519455.1| PREDICTED: nitrate transporter 1.3-like [Gly...    96   2e-18
gb|ACU17848.1| unknown [Glycine max]                                   96   2e-18

>emb|CBI28855.3| unnamed protein product [Vitis vinifera]
          Length = 1179

 Score =  100 bits (250), Expect = 1e-19
 Identities = 49/84 (58%), Positives = 62/84 (73%)
 Frame = +3

Query: 3    FSVQQATTMNRNIGSFIIPSGSMSXXXXXXXXXXXSVNEKLLVPFARKFTQNVKGITSLQ 182
            F+++QAT MNR +GSF++PSGS S           S+NE++ VP ARK T NV+G+TSLQ
Sbjct: 940  FTIEQATFMNRKLGSFVVPSGSFSVFLFISILLFTSLNERIFVPCARKLTHNVQGVTSLQ 999

Query: 183  RIATGLIFSIAAMVAAAIVEKQRR 254
            R+  GLIFS+ AMV AAIVEKQRR
Sbjct: 1000 RVGIGLIFSMVAMVTAAIVEKQRR 1023


>ref|XP_002274227.1| PREDICTED: nitrate transporter 1.3-like [Vitis vinifera]
          Length = 594

 Score =  100 bits (250), Expect = 1e-19
 Identities = 49/84 (58%), Positives = 62/84 (73%)
 Frame = +3

Query: 3   FSVQQATTMNRNIGSFIIPSGSMSXXXXXXXXXXXSVNEKLLVPFARKFTQNVKGITSLQ 182
           F+++QAT MNR +GSF++PSGS S           S+NE++ VP ARK T NV+G+TSLQ
Sbjct: 355 FTIEQATFMNRKLGSFVVPSGSFSVFLFISILLFTSLNERIFVPCARKLTHNVQGVTSLQ 414

Query: 183 RIATGLIFSIAAMVAAAIVEKQRR 254
           R+  GLIFS+ AMV AAIVEKQRR
Sbjct: 415 RVGIGLIFSMVAMVTAAIVEKQRR 438


>ref|XP_002525323.1| oligopeptide transporter, putative [Ricinus communis]
           gi|223535382|gb|EEF37056.1| oligopeptide transporter,
           putative [Ricinus communis]
          Length = 589

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/84 (57%), Positives = 61/84 (72%)
 Frame = +3

Query: 3   FSVQQATTMNRNIGSFIIPSGSMSXXXXXXXXXXXSVNEKLLVPFARKFTQNVKGITSLQ 182
           F+++QAT M+R +GSF IP+GSMS           S+NE+L VP ARK T N +G TSLQ
Sbjct: 356 FTIEQATFMDRKVGSFTIPAGSMSTFLFITILLFTSLNERLFVPMARKLTNNSQGFTSLQ 415

Query: 183 RIATGLIFSIAAMVAAAIVEKQRR 254
           RI  GLIFS+ AMVAAA++EK+RR
Sbjct: 416 RIGIGLIFSVVAMVAAALIEKERR 439


>ref|XP_003519455.1| PREDICTED: nitrate transporter 1.3-like [Glycine max]
          Length = 588

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/84 (54%), Positives = 60/84 (71%)
 Frame = +3

Query: 3   FSVQQATTMNRNIGSFIIPSGSMSXXXXXXXXXXXSVNEKLLVPFARKFTQNVKGITSLQ 182
           F+++QAT MNR +GS ++P+GS+S           S+NEKL VP ARK T NV+G+TSLQ
Sbjct: 357 FTIEQATFMNRKVGSLVVPAGSLSAFLIITILLFTSLNEKLTVPLARKLTDNVQGLTSLQ 416

Query: 183 RIATGLIFSIAAMVAAAIVEKQRR 254
           R+  GL+FS  AM  AAIVEK+RR
Sbjct: 417 RVGIGLVFSSVAMAVAAIVEKERR 440


>gb|ACU17848.1| unknown [Glycine max]
          Length = 256

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/84 (54%), Positives = 60/84 (71%)
 Frame = +3

Query: 3   FSVQQATTMNRNIGSFIIPSGSMSXXXXXXXXXXXSVNEKLLVPFARKFTQNVKGITSLQ 182
           F+++QAT MNR +GS ++P+GS+S           S+NEKL VP ARK T NV+G+TSLQ
Sbjct: 25  FTIEQATFMNRKVGSLVVPAGSLSAFLIITILLFTSLNEKLTVPLARKLTDNVQGLTSLQ 84

Query: 183 RIATGLIFSIAAMVAAAIVEKQRR 254
           R+  GL+FS  AM  AAIVEK+RR
Sbjct: 85  RVGIGLVFSSVAMAVAAIVEKERR 108


Top