BLASTX nr result

ID: Coptis23_contig00025893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025893
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30461.3| unnamed protein product [Vitis vinifera]              114   1e-23
ref|XP_002273340.1| PREDICTED: uncharacterized protein LOC100245...   114   1e-23
emb|CAN70168.1| hypothetical protein VITISV_006870 [Vitis vinifera]   112   9e-23
ref|XP_002308193.1| predicted protein [Populus trichocarpa] gi|2...   105   8e-21
emb|CBI16031.3| unnamed protein product [Vitis vinifera]              105   1e-20

>emb|CBI30461.3| unnamed protein product [Vitis vinifera]
          Length = 855

 Score =  114 bits (286), Expect = 1e-23
 Identities = 75/174 (43%), Positives = 95/174 (54%), Gaps = 3/174 (1%)
 Frame = +1

Query: 1   GTLFPRKSPRNCQKQSVERKS-KDDELVKHMSNLPRYLQRVERGENPQEKVLNFGVLDWG 177
           G+LF RK     QKQ   RK+ KDDELVKHMSNLP YLQR+E+GEN QEK LNFGVLDW 
Sbjct: 59  GSLFQRKFSAGHQKQHTSRKATKDDELVKHMSNLPGYLQRIEKGENLQEKALNFGVLDWE 118

Query: 178 RLEKWKYSQNAVPQR-SVMYXXXXXXXXXXXXXXXXXXXXXXXXXXILANRKRSPSRSAH 354
            LEKWK++Q  VP+R S                              + + K+  S  ++
Sbjct: 119 SLEKWKHNQKHVPERGSTNASSTGCNSSLVSSIGSSTLSSRDQNGTRIRHSKQHLSPCSN 178

Query: 355 VTSSPKESRSMGVKPTTPNIGALQDTISASTNSSVGRQ-KLPGTDLSSRRSHSK 513
           ++SS K   S G K     +  L+D    S NS++GRQ KL  TD    RS+S+
Sbjct: 179 ISSSHKGDLSQGAKLARGKVTCLKD-FETSPNSNLGRQRKLHYTDKPFSRSYSE 231


>ref|XP_002273340.1| PREDICTED: uncharacterized protein LOC100245981 [Vitis vinifera]
          Length = 897

 Score =  114 bits (286), Expect = 1e-23
 Identities = 75/174 (43%), Positives = 95/174 (54%), Gaps = 3/174 (1%)
 Frame = +1

Query: 1   GTLFPRKSPRNCQKQSVERKS-KDDELVKHMSNLPRYLQRVERGENPQEKVLNFGVLDWG 177
           G+LF RK     QKQ   RK+ KDDELVKHMSNLP YLQR+E+GEN QEK LNFGVLDW 
Sbjct: 59  GSLFQRKFSAGHQKQHTSRKATKDDELVKHMSNLPGYLQRIEKGENLQEKALNFGVLDWE 118

Query: 178 RLEKWKYSQNAVPQR-SVMYXXXXXXXXXXXXXXXXXXXXXXXXXXILANRKRSPSRSAH 354
            LEKWK++Q  VP+R S                              + + K+  S  ++
Sbjct: 119 SLEKWKHNQKHVPERGSTNASSTGCNSSLVSSIGSSTLSSRDQNGTRIRHSKQHLSPCSN 178

Query: 355 VTSSPKESRSMGVKPTTPNIGALQDTISASTNSSVGRQ-KLPGTDLSSRRSHSK 513
           ++SS K   S G K     +  L+D    S NS++GRQ KL  TD    RS+S+
Sbjct: 179 ISSSHKGDLSQGAKLARGKVTCLKD-FETSPNSNLGRQRKLHYTDKPFSRSYSE 231


>emb|CAN70168.1| hypothetical protein VITISV_006870 [Vitis vinifera]
          Length = 922

 Score =  112 bits (279), Expect = 9e-23
 Identities = 82/218 (37%), Positives = 104/218 (47%), Gaps = 2/218 (0%)
 Frame = +1

Query: 19  KSPRNCQKQSVERKS-KDDELVKHMSNLPRYLQRVERGENPQEKVLNFGVLDWGRLEKWK 195
           KS  N  KQ VE K+ +D+ELVK+MSNLP YL   ER EN QEK L+FGVLDWGRLEKW+
Sbjct: 64  KSLGNHLKQRVEGKATEDEELVKYMSNLPSYL---ERRENFQEKALSFGVLDWGRLEKWQ 120

Query: 196 YSQNAVPQRSVMYXXXXXXXXXXXXXXXXXXXXXXXXXXI-LANRKRSPSRSAHVTSSPK 372
           Y    +P +S  +                               R R P+  +H+ +SP 
Sbjct: 121 YDHKQIPNKSGRHSSSSSNSSSLFSTDESSTHSSGGHSCSPXRQRIRRPTLQSHLKASPA 180

Query: 373 ESRSMGVKPTTPNIGALQDTISASTNSSVGRQKLPGTDLSSRRSHSKMKFEKGMKNDINP 552
           E  S GVK    N G  QD  + S     G+Q+   T+ SS +  S++K EK   N  NP
Sbjct: 181 EGFSEGVKFFGGNAGKFQDLNAPSGTPFSGQQRFIKTNQSSCQIQSEIKLEKCKINSSNP 240

Query: 553 KFIMEKGIPXXXXXXXXXXXXXKGKNKVQDGGSTQRTE 666
           K   E                 KGK K+QDG   +R E
Sbjct: 241 KASAEMR-TSTNLENCEMASCSKGKMKIQDGDFAERKE 277


>ref|XP_002308193.1| predicted protein [Populus trichocarpa] gi|222854169|gb|EEE91716.1|
           predicted protein [Populus trichocarpa]
          Length = 979

 Score =  105 bits (262), Expect = 8e-21
 Identities = 69/183 (37%), Positives = 99/183 (54%), Gaps = 2/183 (1%)
 Frame = +1

Query: 13  PRKSPRNCQKQSVERKS-KDDELVKHMSNLPRYLQRVERGENPQEKVLNFGVLDWGRLEK 189
           P+ S  N Q  SV+R S KDDELVK+MS+LP YLQR+ER E+ Q+K LN GVLDW RLEK
Sbjct: 86  PKTSGNNHQLHSVKRNSRKDDELVKYMSDLPGYLQRMERSESIQDKALNVGVLDWSRLEK 145

Query: 190 WKYSQNAVPQRSVMYXXXXXXXXXXXXXXXXXXXXXXXXXXILANR-KRSPSRSAHVTSS 366
           W+ + +     S+                             LA+R K+ PS S+ + SS
Sbjct: 146 WRIAASYSNSTSL------TSSNLPSKITMKSATPNAVRNNTLAHRSKQHPSLSSSLNSS 199

Query: 367 PKESRSMGVKPTTPNIGALQDTISASTNSSVGRQKLPGTDLSSRRSHSKMKFEKGMKNDI 546
            ++  S   KP   N    QD  ++S +S  G++K+  T+ S  R++S +  E+G + D+
Sbjct: 200 HRDHVSRASKPPIQNASCFQDFETSSKSSVNGQKKVRRTNKSVGRNNSDVILEQGKREDV 259

Query: 547 NPK 555
           N K
Sbjct: 260 NQK 262


>emb|CBI16031.3| unnamed protein product [Vitis vinifera]
          Length = 705

 Score =  105 bits (261), Expect = 1e-20
 Identities = 72/181 (39%), Positives = 92/181 (50%), Gaps = 2/181 (1%)
 Frame = +1

Query: 19  KSPRNCQKQSVERKS-KDDELVKHMSNLPRYLQRVERGENPQEKVLNFGVLDWGRLEKWK 195
           KS  N  KQ VE K+ +D+ELVK+MSNLP YL   ER EN QEK L+FGVLDWGRLEKW+
Sbjct: 64  KSLGNHLKQRVEGKATEDEELVKYMSNLPSYL---ERRENFQEKALSFGVLDWGRLEKWQ 120

Query: 196 YSQNAVPQRSVMYXXXXXXXXXXXXXXXXXXXXXXXXXXI-LANRKRSPSRSAHVTSSPK 372
           Y    +P +S  +                               R R P+  +H+ +SP 
Sbjct: 121 YDHKQIPNKSGRHSSSSSNSSSLFSTDESSTHSSGGHSCSPTRQRIRRPTLQSHLKASPA 180

Query: 373 ESRSMGVKPTTPNIGALQDTISASTNSSVGRQKLPGTDLSSRRSHSKMKFEKGMKNDINP 552
           E  S GVK    N G  QD  + S     G+Q+   T+ SS +  S++K EK   N  NP
Sbjct: 181 EGFSEGVKFFGGNAGKFQDLNAPSGTPFSGQQRFIKTNQSSCQIQSEIKLEKCKINSSNP 240

Query: 553 K 555
           K
Sbjct: 241 K 241


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