BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025892
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD27590.1|AF121261_1 elongation factor 1-alpha 1 [Lilium lon...    49   2e-07
ref|XP_002460859.1| hypothetical protein SORBIDRAFT_02g036420 [S...    49   2e-07
ref|NP_001151074.1| elongation factor 1-alpha [Zea mays] gi|1956...    49   2e-07
ref|NP_001183947.1| uncharacterized protein LOC100502553 [Zea ma...    49   2e-07
ref|NP_001104939.1| elongation factor alpha6 [Zea mays] gi|72303...    49   3e-07

>gb|AAD27590.1|AF121261_1 elongation factor 1-alpha 1 [Lilium longiflorum]
          Length = 447

 Score = 48.9 bits (115), Expect(3) = 2e-07
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = -2

Query: 400 RFMSNGDVGFVKMILTKSVVVETFDEYPP 314
           +F+ NGD GFVKMI TK +VVETF EYPP
Sbjct: 380 KFLKNGDAGFVKMIPTKPMVVETFSEYPP 408



 Score = 27.3 bits (59), Expect(3) = 2e-07
 Identities = 15/21 (71%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = -3

Query: 312 PLGRF-VNGMRQIVAVSVIKT 253
           PLGRF V  MRQ VAV VIK+
Sbjct: 408 PLGRFAVRDMRQTVAVGVIKS 428



 Score = 23.1 bits (48), Expect(3) = 2e-07
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -1

Query: 254 LKSVEKKDPT 225
           +KSVEKKDPT
Sbjct: 426 IKSVEKKDPT 435


>ref|XP_002460859.1| hypothetical protein SORBIDRAFT_02g036420 [Sorghum bicolor]
           gi|241924236|gb|EER97380.1| hypothetical protein
           SORBIDRAFT_02g036420 [Sorghum bicolor]
          Length = 447

 Score = 48.9 bits (115), Expect(3) = 2e-07
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = -2

Query: 400 RFMSNGDVGFVKMILTKSVVVETFDEYPP 314
           +F+ NGD GFVKMI TK +VVETF EYPP
Sbjct: 380 KFLKNGDAGFVKMIPTKPMVVETFSEYPP 408



 Score = 27.3 bits (59), Expect(3) = 2e-07
 Identities = 15/21 (71%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = -3

Query: 312 PLGRF-VNGMRQIVAVSVIKT 253
           PLGRF V  MRQ VAV VIK+
Sbjct: 408 PLGRFAVRDMRQTVAVGVIKS 428



 Score = 23.1 bits (48), Expect(3) = 2e-07
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -1

Query: 254 LKSVEKKDPT 225
           +KSVEKKDPT
Sbjct: 426 IKSVEKKDPT 435


>ref|NP_001151074.1| elongation factor 1-alpha [Zea mays] gi|195644104|gb|ACG41520.1|
           elongation factor 1-alpha [Zea mays]
           gi|414887122|tpg|DAA63136.1| TPA: putative translation
           elongation factor Tu family protein [Zea mays]
          Length = 447

 Score = 48.9 bits (115), Expect(3) = 2e-07
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = -2

Query: 400 RFMSNGDVGFVKMILTKSVVVETFDEYPP 314
           +F+ NGD GFVKMI TK +VVETF EYPP
Sbjct: 380 KFLKNGDAGFVKMIPTKPMVVETFSEYPP 408



 Score = 27.3 bits (59), Expect(3) = 2e-07
 Identities = 15/21 (71%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = -3

Query: 312 PLGRF-VNGMRQIVAVSVIKT 253
           PLGRF V  MRQ VAV VIK+
Sbjct: 408 PLGRFAVRDMRQTVAVGVIKS 428



 Score = 23.1 bits (48), Expect(3) = 2e-07
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -1

Query: 254 LKSVEKKDPT 225
           +KSVEKKDPT
Sbjct: 426 IKSVEKKDPT 435


>ref|NP_001183947.1| uncharacterized protein LOC100502553 [Zea mays]
           gi|194701200|gb|ACF84684.1| unknown [Zea mays]
          Length = 399

 Score = 48.9 bits (115), Expect(3) = 2e-07
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = -2

Query: 400 RFMSNGDVGFVKMILTKSVVVETFDEYPP 314
           +F+ NGD GFVKMI TK +VVETF EYPP
Sbjct: 332 KFLKNGDAGFVKMIPTKPMVVETFSEYPP 360



 Score = 27.3 bits (59), Expect(3) = 2e-07
 Identities = 15/21 (71%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = -3

Query: 312 PLGRF-VNGMRQIVAVSVIKT 253
           PLGRF V  MRQ VAV VIK+
Sbjct: 360 PLGRFAVRDMRQTVAVGVIKS 380



 Score = 23.1 bits (48), Expect(3) = 2e-07
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -1

Query: 254 LKSVEKKDPT 225
           +KSVEKKDPT
Sbjct: 378 IKSVEKKDPT 387


>ref|NP_001104939.1| elongation factor alpha6 [Zea mays] gi|7230393|gb|AAF42980.1|
           elongation factor 1 alpha [Zea mays]
          Length = 447

 Score = 48.5 bits (114), Expect(3) = 3e-07
 Identities = 20/29 (68%), Positives = 24/29 (82%)
 Frame = -2

Query: 400 RFMSNGDVGFVKMILTKSVVVETFDEYPP 314
           +F+ NGD GFVKM+ TK +VVETF EYPP
Sbjct: 380 KFLKNGDAGFVKMVPTKPMVVETFSEYPP 408



 Score = 27.3 bits (59), Expect(3) = 3e-07
 Identities = 15/21 (71%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = -3

Query: 312 PLGRF-VNGMRQIVAVSVIKT 253
           PLGRF V  MRQ VAV VIK+
Sbjct: 408 PLGRFAVRDMRQTVAVGVIKS 428



 Score = 23.1 bits (48), Expect(3) = 3e-07
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -1

Query: 254 LKSVEKKDPT 225
           +KSVEKKDPT
Sbjct: 426 IKSVEKKDPT 435