BLASTX nr result
ID: Coptis23_contig00025887
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00025887
(1408 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containi... 627 e-177
ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containi... 597 e-168
ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containi... 597 e-168
ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containi... 585 e-165
ref|XP_002325518.1| predicted protein [Populus trichocarpa] gi|2... 583 e-164
>ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Vitis vinifera]
Length = 725
Score = 627 bits (1616), Expect = e-177
Identities = 310/463 (66%), Positives = 375/463 (80%), Gaps = 13/463 (2%)
Frame = -3
Query: 1355 PPNSKRP--IFIKKKQTSKFPSKTQ-----------KFSQKDAFPQSLPLHKKNPSSIYK 1215
P SK P I+ + T P++TQ FS+KDAFP SLPLH KNP +I+
Sbjct: 62 PLQSKNPHAIYSDNQTTPSRPTQTQFRTRLKSPKKKPFSEKDAFPMSLPLHTKNPHAIFS 121
Query: 1214 DIQNFARENKLKEALTILDYLEKEGIPVNTTTFSSLLNACVRTKSLGYGKQVHTHIRING 1035
DIQ FAR+ KLKEALTILDY +++GIPVN TTFSSLL ACV +KSL +GKQ+H HIRING
Sbjct: 122 DIQRFARQGKLKEALTILDYCDQQGIPVNPTTFSSLLRACVESKSLTHGKQIHVHIRING 181
Query: 1034 LDNSEFLRTRLVHMYSSCGSMEDAEKVFDELSTRSSCVSVYPWNALLRGNVVRGGWRYGD 855
L+N+EFLRT+LVHMY+SCGS+EDA VFD +S++S VY WNALLRGNV+ G Y +
Sbjct: 182 LENNEFLRTKLVHMYTSCGSLEDARGVFDGVSSKS----VYTWNALLRGNVISGRRHYRE 237
Query: 854 VLDTYSKMREMGVGMNVYTFSCLIKSFAGSSALTQGLKVHALLVKNGFGDGSIVIQTSLI 675
L TYS+MRE+GV +NVY+FSC+IKSFAG++A QGLK HALL+KNG D SI ++TSLI
Sbjct: 238 ALSTYSEMRELGVELNVYSFSCMIKSFAGATAFRQGLKAHALLIKNGLVDSSI-LRTSLI 296
Query: 674 DMYFKCGKIKLARLLFEEMDKIDVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSV 495
DMYFKCGKIKLARL+FEE+ + DVVVWGAMI+GF HNRL +EALEYLRWM REG+ PNSV
Sbjct: 297 DMYFKCGKIKLARLMFEEIVERDVVVWGAMIAGFGHNRLQREALEYLRWMRREGICPNSV 356
Query: 494 ILTAALPAVGELWASYLGKEIHGYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRR 315
I+T LP +GE+ A LG+E+H YV+KTK+Y+ Q+FIQS+LIDMYCKCGDM SGRQVF
Sbjct: 357 IMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCKCGDMASGRQVFYA 416
Query: 314 SEVRDVISWTALISGYISNGRLDQALRSMIWMQQEGVKPDVVTIATVLPVCAQLKALKQG 135
S R+ +SWTAL+SGY+SNGRLDQALRS+ WMQQEG +PDVVT+ATVLPVCA+L+AL+QG
Sbjct: 417 STERNAVSWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQG 476
Query: 134 KEIHGYVIKNGYLPNVSIVTSLMVMYSRSGCLEYSCKLFDGTE 6
KEIH Y +KNG+LPNVSI TSLMVMYS+ G L+YS KLFDG +
Sbjct: 477 KEIHSYAVKNGFLPNVSIATSLMVMYSKCGNLDYSFKLFDGMD 519
Score = 207 bits (527), Expect = 5e-51
Identities = 123/381 (32%), Positives = 197/381 (51%)
Frame = -3
Query: 1181 KEALTILDYLEKEGIPVNTTTFSSLLNACVRTKSLGYGKQVHTHIRINGLDNSEFLRTRL 1002
+EAL+ + + G+ +N +FS ++ + + G + H + NGL +S LRT L
Sbjct: 236 REALSTYSEMRELGVELNVYSFSCMIKSFAGATAFRQGLKAHALLIKNGLVDSSILRTSL 295
Query: 1001 VHMYSSCGSMEDAEKVFDELSTRSSCVSVYPWNALLRGNVVRGGWRYGDVLDTYSKMREM 822
+ MY CG ++ A +F+E+ R V W A++ G R + L+ MR
Sbjct: 296 IDMYFKCGKIKLARLMFEEIVERDVVV----WGAMIAGFGHNRLQR--EALEYLRWMRRE 349
Query: 821 GVGMNVYTFSCLIKSFAGSSALTQGLKVHALLVKNGFGDGSIVIQTSLIDMYFKCGKIKL 642
G+ N + ++ A G +VHA +VK + IQ++LIDMY KCG +
Sbjct: 350 GICPNSVIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCKCGDMAS 409
Query: 641 ARLLFEEMDKIDVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSVILTAALPAVGE 462
R +F + + V W A++SG+ N +AL + WM +EG P+ V + LP E
Sbjct: 410 GRQVFYASTERNAVSWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAE 469
Query: 461 LWASYLGKEIHGYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRRSEVRDVISWTA 282
L A GKEIH Y +K + + I +SL+ MY KCG++ ++F + R+VISWTA
Sbjct: 470 LRALRQGKEIHSYAVKN-GFLPNVSIATSLMVMYSKCGNLDYSFKLFDGMDARNVISWTA 528
Query: 281 LISGYISNGRLDQALRSMIWMQQEGVKPDVVTIATVLPVCAQLKALKQGKEIHGYVIKNG 102
+I Y+ NG L +A+ MQ +PD V +A +L +C +L+ LK GKEIHG ++K
Sbjct: 529 MIDSYVENGCLHEAVGVFRSMQLSKHRPDSVAMARILSICGELRVLKLGKEIHGQILKKD 588
Query: 101 YLPNVSIVTSLMVMYSRSGCL 39
+ + ++ MY + G +
Sbjct: 589 FESIPFVSAEIIKMYGKFGAI 609
Score = 91.7 bits (226), Expect = 4e-16
Identities = 57/245 (23%), Positives = 115/245 (46%)
Frame = -3
Query: 1211 IQNFARENKLKEALTILDYLEKEGIPVNTTTFSSLLNACVRTKSLGYGKQVHTHIRINGL 1032
+ + +L +AL + ++++EG + T +++L C ++L GK++H++ NG
Sbjct: 429 MSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIHSYAVKNGF 488
Query: 1031 DNSEFLRTRLVHMYSSCGSMEDAEKVFDELSTRSSCVSVYPWNALLRGNVVRGGWRYGDV 852
+ + T L+ MYS CG+++ + K+FD + R +V W A++ V G +
Sbjct: 489 LPNVSIATSLMVMYSKCGNLDYSFKLFDGMDAR----NVISWTAMIDSYVENGCLH--EA 542
Query: 851 LDTYSKMREMGVGMNVYTFSCLIKSFAGSSALTQGLKVHALLVKNGFGDGSIVIQTSLID 672
+ + M+ + + ++ L G ++H ++K F + + +I
Sbjct: 543 VGVFRSMQLSKHRPDSVAMARILSICGELRVLKLGKEIHGQILKKDF-ESIPFVSAEIIK 601
Query: 671 MYFKCGKIKLARLLFEEMDKIDVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSVI 492
MY K G I A+L F+ + + W A+I + +N L+++A+ M +G PN
Sbjct: 602 MYGKFGAISKAKLAFKAIPAKGSMAWTAIIEAYGYNDLYQDAINLFHQMQSDGFIPNHYT 661
Query: 491 LTAAL 477
A L
Sbjct: 662 FKAVL 666
>ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Cucumis sativus]
Length = 716
Score = 597 bits (1538), Expect = e-168
Identities = 286/442 (64%), Positives = 366/442 (82%), Gaps = 1/442 (0%)
Frame = -3
Query: 1325 KKKQTSKFPS-KTQKFSQKDAFPQSLPLHKKNPSSIYKDIQNFARENKLKEALTILDYLE 1149
K K SKF + K F++KDAFP SLPLH KNP +IY+D+Q FAR+NKLKEALTI+DY++
Sbjct: 47 KIKIVSKFRNRKRPTFAEKDAFPSSLPLHTKNPHAIYEDVQRFARQNKLKEALTIMDYVD 106
Query: 1148 KEGIPVNTTTFSSLLNACVRTKSLGYGKQVHTHIRINGLDNSEFLRTRLVHMYSSCGSME 969
++GIPVN TTFSSL+ ACVRTKS+ Y KQ+H HIRINGL+N+EF+RTRLVHMY++CGS+E
Sbjct: 107 QQGIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLE 166
Query: 968 DAEKVFDELSTRSSCVSVYPWNALLRGNVVRGGWRYGDVLDTYSKMREMGVGMNVYTFSC 789
+A+K+FDE S++S VYPWNALLRG V+ G Y +L TY++MR +GV +NVY+F+
Sbjct: 167 EAQKLFDESSSKS----VYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFAN 222
Query: 788 LIKSFAGSSALTQGLKVHALLVKNGFGDGSIVIQTSLIDMYFKCGKIKLARLLFEEMDKI 609
+IKSFAG+SA TQGLK H LL+KNG GS ++ T+L+DMYFKCGKIKLAR +F E+ +
Sbjct: 223 IIKSFAGASAFTQGLKAHGLLIKNGL-IGSSLLGTTLVDMYFKCGKIKLARQMFGEITER 281
Query: 608 DVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSVILTAALPAVGELWASYLGKEIH 429
DVVVWG++I+GFAHNRL +EALEY R M+ +G+ PNSVILT LP +GE+WA LG+E+H
Sbjct: 282 DVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVH 341
Query: 428 GYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRRSEVRDVISWTALISGYISNGRL 249
YVIKTK+Y+ Q+FIQS+LIDMYCKCGD+ SGR VF S R+ I WTAL+SGY NGRL
Sbjct: 342 AYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRL 401
Query: 248 DQALRSMIWMQQEGVKPDVVTIATVLPVCAQLKALKQGKEIHGYVIKNGYLPNVSIVTSL 69
+QA+RS+IWMQQEG +PD+VT+AT+LPVCAQL+AL+ GKEIH Y +KN +LPNVSIV+SL
Sbjct: 402 EQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNVSIVSSL 461
Query: 68 MVMYSRSGCLEYSCKLFDGTER 3
MVMYS+ G ++Y+ KLF+G E+
Sbjct: 462 MVMYSKCGVMDYTLKLFNGMEQ 483
Score = 194 bits (492), Expect = 6e-47
Identities = 121/380 (31%), Positives = 198/380 (52%)
Frame = -3
Query: 1154 LEKEGIPVNTTTFSSLLNACVRTKSLGYGKQVHTHIRINGLDNSEFLRTRLVHMYSSCGS 975
+ + G+ +N +F++++ + + G + H + NGL S L T LV MY CG
Sbjct: 208 MRRLGVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCGK 267
Query: 974 MEDAEKVFDELSTRSSCVSVYPWNALLRGNVVRGGWRYGDVLDTYSKMREMGVGMNVYTF 795
++ A ++F E++ R V W +++ G R + L+ +M + G+ N
Sbjct: 268 IKLARQMFGEITERDVVV----WGSIIAGFAHNRLQR--EALEYTRRMIDDGIRPNSVIL 321
Query: 794 SCLIKSFAGSSALTQGLKVHALLVKNGFGDGSIVIQTSLIDMYFKCGKIKLARLLFEEMD 615
+ ++ A G +VHA ++K I IQ++LIDMY KCG I R +F
Sbjct: 322 TTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASM 381
Query: 614 KIDVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSVILTAALPAVGELWASYLGKE 435
+ + + W A++SG+A N ++A+ + WM +EG P+ V + LP +L A GKE
Sbjct: 382 ERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKE 441
Query: 434 IHGYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRRSEVRDVISWTALISGYISNG 255
IH Y +K N + I SSL+ MY KCG M ++F E R+VI WTA+I YI N
Sbjct: 442 IHAYAMKNCFLPN-VSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQ 500
Query: 254 RLDQALRSMIWMQQEGVKPDVVTIATVLPVCAQLKALKQGKEIHGYVIKNGYLPNVSIVT 75
+A+ MQ +PD VT++ +L +C++ K LK GKEIHG V+K + P +
Sbjct: 501 CPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRKFEPVHFVSA 560
Query: 74 SLMVMYSRSGCLEYSCKLFD 15
L+ +Y + G ++ + +F+
Sbjct: 561 ELVKLYGKCGAVKMAKMVFE 580
Score = 149 bits (376), Expect = 2e-33
Identities = 104/394 (26%), Positives = 187/394 (47%), Gaps = 2/394 (0%)
Frame = -3
Query: 1211 IQNFARENKLKEALTILDYLEKEGIPVNTTTFSSLLNACVRTKSLGYGKQVHTH-IRING 1035
I FA +EAL + +GI N+ +++L + G++VH + I+
Sbjct: 290 IAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKS 349
Query: 1034 LDNSEFLRTRLVHMYSSCGSMEDAEKVFDELSTRSSCVSVYPWNALLRGNVVRGGWRYGD 855
F+++ L+ MY CG + VF R++ W AL+ G + G R
Sbjct: 350 YSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAIC----WTALMSGYALNG--RLEQ 403
Query: 854 VLDTYSKMREMGVGMNVYTFSCLIKSFAGSSALTQGLKVHALLVKNGFGDGSIVIQTSLI 675
+ + M++ G ++ T + ++ A AL G ++HA +KN F ++ I +SL+
Sbjct: 404 AVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLP-NVSIVSSLM 462
Query: 674 DMYFKCGKIKLARLLFEEMDKIDVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSV 495
MY KCG + LF M++ +V++W AMI + N+ EA++ R M P++V
Sbjct: 463 VMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTV 522
Query: 494 ILTAALPAVGELWASYLGKEIHGYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRR 315
++ L E +GKEIHG V+K K + F+ + L+ +Y KCG + + VF
Sbjct: 523 TMSRILYICSEQKMLKMGKEIHGQVLKRK-FEPVHFVSAELVKLYGKCGAVKMAKMVFEA 581
Query: 314 SEVRDVISWTALISGYISNGRLDQALRSMIWMQQEGVKPDVVTIATVLPVCAQLKALKQG 135
V+ ++WTA+I Y +G +A+ M+ G+ P+ T VL +C + + +
Sbjct: 582 IPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKEAGFVDEA 641
Query: 134 KEIHGYV-IKNGYLPNVSIVTSLMVMYSRSGCLE 36
I + ++ P+ + ++ + +R G LE
Sbjct: 642 LRIFKLMSVRYKIKPSEEHYSLVIAILTRFGRLE 675
>ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Cucumis sativus]
Length = 696
Score = 597 bits (1538), Expect = e-168
Identities = 286/442 (64%), Positives = 366/442 (82%), Gaps = 1/442 (0%)
Frame = -3
Query: 1325 KKKQTSKFPS-KTQKFSQKDAFPQSLPLHKKNPSSIYKDIQNFARENKLKEALTILDYLE 1149
K K SKF + K F++KDAFP SLPLH KNP +IY+D+Q FAR+NKLKEALTI+DY++
Sbjct: 47 KIKIVSKFRNRKRPTFAEKDAFPSSLPLHTKNPHAIYEDVQRFARQNKLKEALTIMDYVD 106
Query: 1148 KEGIPVNTTTFSSLLNACVRTKSLGYGKQVHTHIRINGLDNSEFLRTRLVHMYSSCGSME 969
++GIPVN TTFSSL+ ACVRTKS+ Y KQ+H HIRINGL+N+EF+RTRLVHMY++CGS+E
Sbjct: 107 QQGIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLE 166
Query: 968 DAEKVFDELSTRSSCVSVYPWNALLRGNVVRGGWRYGDVLDTYSKMREMGVGMNVYTFSC 789
+A+K+FDE S++S VYPWNALLRG V+ G Y +L TY++MR +GV +NVY+F+
Sbjct: 167 EAQKLFDESSSKS----VYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFAN 222
Query: 788 LIKSFAGSSALTQGLKVHALLVKNGFGDGSIVIQTSLIDMYFKCGKIKLARLLFEEMDKI 609
+IKSFAG+SA TQGLK H LL+KNG GS ++ T+L+DMYFKCGKIKLAR +F E+ +
Sbjct: 223 IIKSFAGASAFTQGLKAHGLLIKNGL-IGSSLLGTTLVDMYFKCGKIKLARQMFGEITER 281
Query: 608 DVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSVILTAALPAVGELWASYLGKEIH 429
DVVVWG++I+GFAHNRL +EALEY R M+ +G+ PNSVILT LP +GE+WA LG+E+H
Sbjct: 282 DVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVH 341
Query: 428 GYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRRSEVRDVISWTALISGYISNGRL 249
YVIKTK+Y+ Q+FIQS+LIDMYCKCGD+ SGR VF S R+ I WTAL+SGY NGRL
Sbjct: 342 AYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRL 401
Query: 248 DQALRSMIWMQQEGVKPDVVTIATVLPVCAQLKALKQGKEIHGYVIKNGYLPNVSIVTSL 69
+QA+RS+IWMQQEG +PD+VT+AT+LPVCAQL+AL+ GKEIH Y +KN +LPNVSIV+SL
Sbjct: 402 EQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNVSIVSSL 461
Query: 68 MVMYSRSGCLEYSCKLFDGTER 3
MVMYS+ G ++Y+ KLF+G E+
Sbjct: 462 MVMYSKCGVMDYTLKLFNGMEQ 483
Score = 194 bits (492), Expect = 6e-47
Identities = 121/380 (31%), Positives = 198/380 (52%)
Frame = -3
Query: 1154 LEKEGIPVNTTTFSSLLNACVRTKSLGYGKQVHTHIRINGLDNSEFLRTRLVHMYSSCGS 975
+ + G+ +N +F++++ + + G + H + NGL S L T LV MY CG
Sbjct: 208 MRRLGVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCGK 267
Query: 974 MEDAEKVFDELSTRSSCVSVYPWNALLRGNVVRGGWRYGDVLDTYSKMREMGVGMNVYTF 795
++ A ++F E++ R V W +++ G R + L+ +M + G+ N
Sbjct: 268 IKLARQMFGEITERDVVV----WGSIIAGFAHNRLQR--EALEYTRRMIDDGIRPNSVIL 321
Query: 794 SCLIKSFAGSSALTQGLKVHALLVKNGFGDGSIVIQTSLIDMYFKCGKIKLARLLFEEMD 615
+ ++ A G +VHA ++K I IQ++LIDMY KCG I R +F
Sbjct: 322 TTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASM 381
Query: 614 KIDVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSVILTAALPAVGELWASYLGKE 435
+ + + W A++SG+A N ++A+ + WM +EG P+ V + LP +L A GKE
Sbjct: 382 ERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKE 441
Query: 434 IHGYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRRSEVRDVISWTALISGYISNG 255
IH Y +K N + I SSL+ MY KCG M ++F E R+VI WTA+I YI N
Sbjct: 442 IHAYAMKNCFLPN-VSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQ 500
Query: 254 RLDQALRSMIWMQQEGVKPDVVTIATVLPVCAQLKALKQGKEIHGYVIKNGYLPNVSIVT 75
+A+ MQ +PD VT++ +L +C++ K LK GKEIHG V+K + P +
Sbjct: 501 CPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRKFEPVHFVSA 560
Query: 74 SLMVMYSRSGCLEYSCKLFD 15
L+ +Y + G ++ + +F+
Sbjct: 561 ELVKLYGKCGAVKMAKMVFE 580
Score = 149 bits (376), Expect = 2e-33
Identities = 104/394 (26%), Positives = 187/394 (47%), Gaps = 2/394 (0%)
Frame = -3
Query: 1211 IQNFARENKLKEALTILDYLEKEGIPVNTTTFSSLLNACVRTKSLGYGKQVHTH-IRING 1035
I FA +EAL + +GI N+ +++L + G++VH + I+
Sbjct: 290 IAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKS 349
Query: 1034 LDNSEFLRTRLVHMYSSCGSMEDAEKVFDELSTRSSCVSVYPWNALLRGNVVRGGWRYGD 855
F+++ L+ MY CG + VF R++ W AL+ G + G R
Sbjct: 350 YSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAIC----WTALMSGYALNG--RLEQ 403
Query: 854 VLDTYSKMREMGVGMNVYTFSCLIKSFAGSSALTQGLKVHALLVKNGFGDGSIVIQTSLI 675
+ + M++ G ++ T + ++ A AL G ++HA +KN F ++ I +SL+
Sbjct: 404 AVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLP-NVSIVSSLM 462
Query: 674 DMYFKCGKIKLARLLFEEMDKIDVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSV 495
MY KCG + LF M++ +V++W AMI + N+ EA++ R M P++V
Sbjct: 463 VMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTV 522
Query: 494 ILTAALPAVGELWASYLGKEIHGYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRR 315
++ L E +GKEIHG V+K K + F+ + L+ +Y KCG + + VF
Sbjct: 523 TMSRILYICSEQKMLKMGKEIHGQVLKRK-FEPVHFVSAELVKLYGKCGAVKMAKMVFEA 581
Query: 314 SEVRDVISWTALISGYISNGRLDQALRSMIWMQQEGVKPDVVTIATVLPVCAQLKALKQG 135
V+ ++WTA+I Y +G +A+ M+ G+ P+ T VL +C + + +
Sbjct: 582 IPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKEAGFVDEA 641
Query: 134 KEIHGYV-IKNGYLPNVSIVTSLMVMYSRSGCLE 36
I + ++ P+ + ++ + +R G LE
Sbjct: 642 LRIFKLMSVRYKIKPSEEHYSLVIAILTRFGRLE 675
>ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Glycine max]
Length = 682
Score = 585 bits (1509), Expect = e-165
Identities = 284/464 (61%), Positives = 369/464 (79%)
Frame = -3
Query: 1394 KTTSPSSKIQAKPPPNSKRPIFIKKKQTSKFPSKTQKFSQKDAFPQSLPLHKKNPSSIYK 1215
++ P SK PP P +K +K P + F++KDAFP SLPLH KNP I+K
Sbjct: 31 RSPPPPSKTHHTKPPRFTTP----RKHRTKKP---KPFTEKDAFPSSLPLHNKNPIFIFK 83
Query: 1214 DIQNFARENKLKEALTILDYLEKEGIPVNTTTFSSLLNACVRTKSLGYGKQVHTHIRING 1035
DI+ FAR+NKLKEALTILDY+++ GIPV+ TTFSS++ AC+R KSL G++VHTHIRING
Sbjct: 84 DIKRFARQNKLKEALTILDYVDQRGIPVDATTFSSVVAACIRAKSLPQGREVHTHIRING 143
Query: 1034 LDNSEFLRTRLVHMYSSCGSMEDAEKVFDELSTRSSCVSVYPWNALLRGNVVRGGWRYGD 855
L+N+ FLRT+LVHMY++CGS+EDA+K+FD L C SVYPWNALLRG VV G +Y D
Sbjct: 144 LENNSFLRTKLVHMYTACGSLEDAQKLFDGLP----CESVYPWNALLRGTVVSGKRQYID 199
Query: 854 VLDTYSKMREMGVGMNVYTFSCLIKSFAGSSALTQGLKVHALLVKNGFGDGSIVIQTSLI 675
VL TY++MR +GV +NVY+FS +IKSFAG+ A +QGLK H LL+KNG D + +++TSLI
Sbjct: 200 VLKTYTEMRALGVELNVYSFSNVIKSFAGARAFSQGLKTHGLLIKNGLVD-NYILRTSLI 258
Query: 674 DMYFKCGKIKLARLLFEEMDKIDVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSV 495
DMYFKCGK++LA +FEE+ + DVVVWGAM++GFAHNRL +E LEY+RWMV EGV+PNSV
Sbjct: 259 DMYFKCGKVRLACRVFEEIPERDVVVWGAMLAGFAHNRLQREVLEYVRWMVEEGVKPNSV 318
Query: 494 ILTAALPAVGELWASYLGKEIHGYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRR 315
++T +P +GE+ A LG+E H YV+KTK+Y+ + +QSSLIDMYCKCGDM+S R+VF
Sbjct: 319 VMTIVIPVIGEVCARRLGQEFHAYVVKTKSYSKLVPVQSSLIDMYCKCGDMISARRVFYG 378
Query: 314 SEVRDVISWTALISGYISNGRLDQALRSMIWMQQEGVKPDVVTIATVLPVCAQLKALKQG 135
S+ R+V+ WTAL+SGY +NG+L+QALRS IWMQQEG +PDVVT+ATVLPVCAQL+AL+QG
Sbjct: 379 SKERNVVCWTALMSGYAANGKLEQALRSTIWMQQEGFRPDVVTLATVLPVCAQLRALEQG 438
Query: 134 KEIHGYVIKNGYLPNVSIVTSLMVMYSRSGCLEYSCKLFDGTER 3
K+IH Y +K+ +LPNVS+ +SLM MYS+ G +EYS +LFD E+
Sbjct: 439 KQIHAYALKHWFLPNVSVASSLMTMYSKCGVVEYSRRLFDNMEQ 482
Score = 204 bits (520), Expect = 3e-50
Identities = 132/376 (35%), Positives = 197/376 (52%)
Frame = -3
Query: 1142 GIPVNTTTFSSLLNACVRTKSLGYGKQVHTHIRINGLDNSEFLRTRLVHMYSSCGSMEDA 963
G+ +N +FS+++ + ++ G + H + NGL ++ LRT L+ MY CG + A
Sbjct: 211 GVELNVYSFSNVIKSFAGARAFSQGLKTHGLLIKNGLVDNYILRTSLIDMYFKCGKVRLA 270
Query: 962 EKVFDELSTRSSCVSVYPWNALLRGNVVRGGWRYGDVLDTYSKMREMGVGMNVYTFSCLI 783
+VF+E+ R V W A+L G R +VL+ M E GV N + +I
Sbjct: 271 CRVFEEIPERDVVV----WGAMLAGFAHNRLQR--EVLEYVRWMVEEGVKPNSVVMTIVI 324
Query: 782 KSFAGSSALTQGLKVHALLVKNGFGDGSIVIQTSLIDMYFKCGKIKLARLLFEEMDKIDV 603
A G + HA +VK + +Q+SLIDMY KCG + AR +F + +V
Sbjct: 325 PVIGEVCARRLGQEFHAYVVKTKSYSKLVPVQSSLIDMYCKCGDMISARRVFYGSKERNV 384
Query: 602 VVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSVILTAALPAVGELWASYLGKEIHGY 423
V W A++SG+A N ++AL WM +EG P+ V L LP +L A GK+IH Y
Sbjct: 385 VCWTALMSGYAANGKLEQALRSTIWMQQEGFRPDVVTLATVLPVCAQLRALEQGKQIHAY 444
Query: 422 VIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRRSEVRDVISWTALISGYISNGRLDQ 243
+K N + + SSL+ MY KCG + R++F E R+VISWTA+I YI NG L +
Sbjct: 445 ALKHWFLPN-VSVASSLMTMYSKCGVVEYSRRLFDNMEQRNVISWTAMIDSYIENGYLCE 503
Query: 242 ALRSMIWMQQEGVKPDVVTIATVLPVCAQLKALKQGKEIHGYVIKNGYLPNVSIVTSLMV 63
AL + MQ +PD V I +L VC + K +K GKEIHG ++K + + L+
Sbjct: 504 ALGVIRSMQLSKHRPDSVAIGRMLSVCGERKLVKLGKEIHGQILKRDFTSVHFVSAELIN 563
Query: 62 MYSRSGCLEYSCKLFD 15
MY G + + +F+
Sbjct: 564 MYGFFGDINKANLVFN 579
Score = 139 bits (351), Expect = 1e-30
Identities = 98/351 (27%), Positives = 168/351 (47%), Gaps = 1/351 (0%)
Frame = -3
Query: 1211 IQNFARENKLKEALTILDYLEKEGIPVNTTTFSSLLNACVRTKSLGYGKQVHTHI-RING 1035
+ FA +E L + ++ +EG+ N+ + ++ + G++ H ++ +
Sbjct: 289 LAGFAHNRLQREVLEYVRWMVEEGVKPNSVVMTIVIPVIGEVCARRLGQEFHAYVVKTKS 348
Query: 1034 LDNSEFLRTRLVHMYSSCGSMEDAEKVFDELSTRSSCVSVYPWNALLRGNVVRGGWRYGD 855
+++ L+ MY CG M A +VF R+ V W AL+ G G +
Sbjct: 349 YSKLVPVQSSLIDMYCKCGDMISARRVFYGSKERN----VVCWTALMSGYAANG--KLEQ 402
Query: 854 VLDTYSKMREMGVGMNVYTFSCLIKSFAGSSALTQGLKVHALLVKNGFGDGSIVIQTSLI 675
L + M++ G +V T + ++ A AL QG ++HA +K+ F ++ + +SL+
Sbjct: 403 ALRSTIWMQQEGFRPDVVTLATVLPVCAQLRALEQGKQIHAYALKHWFLP-NVSVASSLM 461
Query: 674 DMYFKCGKIKLARLLFEEMDKIDVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSV 495
MY KCG ++ +R LF+ M++ +V+ W AMI + N EAL +R M P+SV
Sbjct: 462 TMYSKCGVVEYSRRLFDNMEQRNVISWTAMIDSYIENGYLCEALGVIRSMQLSKHRPDSV 521
Query: 494 ILTAALPAVGELWASYLGKEIHGYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRR 315
+ L GE LGKEIHG ++K +++ + F+ + LI+MY GD+ VF
Sbjct: 522 AIGRMLSVCGERKLVKLGKEIHGQILK-RDFTSVHFVSAELINMYGFFGDINKANLVFNA 580
Query: 314 SEVRDVISWTALISGYISNGRLDQALRSMIWMQQEGVKPDVVTIATVLPVC 162
V+ ++WTALI Y N A+ Q P+ T +L +C
Sbjct: 581 VPVKGSMTWTALIRAYGYNELYQDAVN---LFDQMRYSPNHFTFEAILSIC 628
>ref|XP_002325518.1| predicted protein [Populus trichocarpa] gi|222862393|gb|EEE99899.1|
predicted protein [Populus trichocarpa]
Length = 678
Score = 583 bits (1502), Expect = e-164
Identities = 286/474 (60%), Positives = 364/474 (76%), Gaps = 14/474 (2%)
Frame = -3
Query: 1385 SPSSKIQAKPPPNSKRPIFIKKKQTSKFPSKTQ--------------KFSQKDAFPQSLP 1248
SPS + P + I I +Q SK S TQ +F ++DAFP SLP
Sbjct: 3 SPSLSVHLHCFPQNPLNINITHRQFSKIKSSTQTQPVQTQNPNKKHQQFDERDAFPASLP 62
Query: 1247 LHKKNPSSIYKDIQNFARENKLKEALTILDYLEKEGIPVNTTTFSSLLNACVRTKSLGYG 1068
LHKKNP +IYKDIQ F+R+N+LK+AL I+DY++++GIPVN TTFS+L+ AC+R+KSL
Sbjct: 63 LHKKNPQAIYKDIQRFSRKNQLKDALIIMDYMDQQGIPVNPTTFSALIAACIRSKSLTKA 122
Query: 1067 KQVHTHIRINGLDNSEFLRTRLVHMYSSCGSMEDAEKVFDELSTRSSCVSVYPWNALLRG 888
K++HTH+RINGL N+EFLRT+LVHMY+SCGS+EDA+ VFDE + S +VYPWNAL+RG
Sbjct: 123 KEIHTHLRINGLQNNEFLRTKLVHMYTSCGSIEDAKSVFDECT---STATVYPWNALIRG 179
Query: 887 NVVRGGWRYGDVLDTYSKMREMGVGMNVYTFSCLIKSFAGSSALTQGLKVHALLVKNGFG 708
V+ G RYGDVL Y +MR GV +N YTFS +IKSFAG+SAL QG K HA+++KNG
Sbjct: 180 TVISGKKRYGDVLSAYQEMRVNGVELNEYTFSNVIKSFAGASALKQGFKTHAIMIKNGM- 238
Query: 707 DGSIVIQTSLIDMYFKCGKIKLARLLFEEMDKIDVVVWGAMISGFAHNRLHKEALEYLRW 528
S V++T LIDMYFKCGK +LA +FEE+ + D+V WGAMI+GFAHNR EAL+Y+RW
Sbjct: 239 ISSAVLRTCLIDMYFKCGKTRLAHNVFEELLERDIVAWGAMIAGFAHNRRQWEALDYVRW 298
Query: 527 MVREGVEPNSVILTAALPAVGELWASYLGKEIHGYVIKTKNYANQLFIQSSLIDMYCKCG 348
MV EG+ PNSVI+T+ LP +GE+WA LG+E+H YV+K K Y+ +L IQS LIDMYCKCG
Sbjct: 299 MVSEGMYPNSVIITSILPVIGEVWARRLGQEVHCYVLKMKGYSRELSIQSGLIDMYCKCG 358
Query: 347 DMVSGRQVFRRSEVRDVISWTALISGYISNGRLDQALRSMIWMQQEGVKPDVVTIATVLP 168
DM SGR+VF S R+V+SWTAL+SGY+SNGRL+QALRS++WMQQEG +PDVVT+ATV+P
Sbjct: 359 DMGSGRRVFYGSRERNVVSWTALMSGYVSNGRLEQALRSVVWMQQEGCRPDVVTVATVIP 418
Query: 167 VCAQLKALKQGKEIHGYVIKNGYLPNVSIVTSLMVMYSRSGCLEYSCKLFDGTE 6
VCA+LK LK GKEIH + +K +LPNVS+ TSL+ MYS+ G L+YS KLFDG E
Sbjct: 419 VCAKLKTLKHGKEIHAFSVKKLFLPNVSLTTSLIKMYSKCGVLDYSVKLFDGME 472
Score = 199 bits (505), Expect = 2e-48
Identities = 121/388 (31%), Positives = 200/388 (51%)
Frame = -3
Query: 1178 EALTILDYLEKEGIPVNTTTFSSLLNACVRTKSLGYGKQVHTHIRINGLDNSEFLRTRLV 999
+ L+ + G+ +N TFS+++ + +L G + H + NG+ +S LRT L+
Sbjct: 190 DVLSAYQEMRVNGVELNEYTFSNVIKSFAGASALKQGFKTHAIMIKNGMISSAVLRTCLI 249
Query: 998 HMYSSCGSMEDAEKVFDELSTRSSCVSVYPWNALLRGNVVRGGWRYGDVLDTYSKMREMG 819
MY CG A VF+EL R + W A++ G R + LD M G
Sbjct: 250 DMYFKCGKTRLAHNVFEELLERD----IVAWGAMIAG--FAHNRRQWEALDYVRWMVSEG 303
Query: 818 VGMNVYTFSCLIKSFAGSSALTQGLKVHALLVKNGFGDGSIVIQTSLIDMYFKCGKIKLA 639
+ N + ++ A G +VH ++K + IQ+ LIDMY KCG +
Sbjct: 304 MYPNSVIITSILPVIGEVWARRLGQEVHCYVLKMKGYSRELSIQSGLIDMYCKCGDMGSG 363
Query: 638 RLLFEEMDKIDVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSVILTAALPAVGEL 459
R +F + +VV W A++SG+ N ++AL + WM +EG P+ V + +P +L
Sbjct: 364 RRVFYGSRERNVVSWTALMSGYVSNGRLEQALRSVVWMQQEGCRPDVVTVATVIPVCAKL 423
Query: 458 WASYLGKEIHGYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRRSEVRDVISWTAL 279
GKEIH + +K K + + + +SLI MY KCG + ++F E R+VI+WTA+
Sbjct: 424 KTLKHGKEIHAFSVK-KLFLPNVSLTTSLIKMYSKCGVLDYSVKLFDGMEARNVIAWTAM 482
Query: 278 ISGYISNGRLDQALRSMIWMQQEGVKPDVVTIATVLPVCAQLKALKQGKEIHGYVIKNGY 99
I Y+ NG +++A +MQ +PD VT+A +L +C+++K LK GKEIHG+++K +
Sbjct: 483 IDSYVENGCINEAFNVFRFMQWSKHRPDSVTMARMLSICSKIKTLKFGKEIHGHILKKDF 542
Query: 98 LPNVSIVTSLMVMYSRSGCLEYSCKLFD 15
+ + L+ MY G + + +F+
Sbjct: 543 ESIPFVSSELVKMYGSCGLVHSAESVFN 570
Score = 153 bits (387), Expect = 9e-35
Identities = 104/351 (29%), Positives = 167/351 (47%), Gaps = 1/351 (0%)
Frame = -3
Query: 1211 IQNFARENKLKEALTILDYLEKEGIPVNTTTFSSLLNACVRTKSLGYGKQVHTHI-RING 1035
I FA + EAL + ++ EG+ N+ +S+L + G++VH ++ ++ G
Sbjct: 280 IAGFAHNRRQWEALDYVRWMVSEGMYPNSVIITSILPVIGEVWARRLGQEVHCYVLKMKG 339
Query: 1034 LDNSEFLRTRLVHMYSSCGSMEDAEKVFDELSTRSSCVSVYPWNALLRGNVVRGGWRYGD 855
+++ L+ MY CG M +VF R+ V W AL+ G V G R
Sbjct: 340 YSRELSIQSGLIDMYCKCGDMGSGRRVFYGSRERN----VVSWTALMSGYVSNG--RLEQ 393
Query: 854 VLDTYSKMREMGVGMNVYTFSCLIKSFAGSSALTQGLKVHALLVKNGFGDGSIVIQTSLI 675
L + M++ G +V T + +I A L G ++HA VK F ++ + TSLI
Sbjct: 394 ALRSVVWMQQEGCRPDVVTVATVIPVCAKLKTLKHGKEIHAFSVKKLFLP-NVSLTTSLI 452
Query: 674 DMYFKCGKIKLARLLFEEMDKIDVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSV 495
MY KCG + + LF+ M+ +V+ W AMI + N EA R+M P+SV
Sbjct: 453 KMYSKCGVLDYSVKLFDGMEARNVIAWTAMIDSYVENGCINEAFNVFRFMQWSKHRPDSV 512
Query: 494 ILTAALPAVGELWASYLGKEIHGYVIKTKNYANQLFIQSSLIDMYCKCGDMVSGRQVFRR 315
+ L ++ GKEIHG+++K K++ + F+ S L+ MY CG + S VF
Sbjct: 513 TMARMLSICSKIKTLKFGKEIHGHILK-KDFESIPFVSSELVKMYGSCGLVHSAESVFNA 571
Query: 314 SEVRDVISWTALISGYISNGRLDQALRSMIWMQQEGVKPDVVTIATVLPVC 162
V+ ++WTA+I Y N A++ M+ P+ T VL +C
Sbjct: 572 VPVKGSMTWTAIIEAYGYNSLWQDAIKLFDEMRSRKFTPNDFTFKVVLSIC 622
Score = 81.3 bits (199), Expect = 6e-13
Identities = 54/250 (21%), Positives = 112/250 (44%)
Frame = -3
Query: 1211 IQNFARENKLKEALTILDYLEKEGIPVNTTTFSSLLNACVRTKSLGYGKQVHTHIRINGL 1032
+ + +L++AL + ++++EG + T ++++ C + K+L +GK++H
Sbjct: 382 MSGYVSNGRLEQALRSVVWMQQEGCRPDVVTVATVIPVCAKLKTLKHGKEIHAFSVKKLF 441
Query: 1031 DNSEFLRTRLVHMYSSCGSMEDAEKVFDELSTRSSCVSVYPWNALLRGNVVRGGWRYGDV 852
+ L T L+ MYS CG ++ + K+FD + R+ V W A++ V G +
Sbjct: 442 LPNVSLTTSLIKMYSKCGVLDYSVKLFDGMEARN----VIAWTAMIDSYVENGC--INEA 495
Query: 851 LDTYSKMREMGVGMNVYTFSCLIKSFAGSSALTQGLKVHALLVKNGFGDGSIVIQTSLID 672
+ + M+ + T + ++ + L G ++H ++K F + + + L+
Sbjct: 496 FNVFRFMQWSKHRPDSVTMARMLSICSKIKTLKFGKEIHGHILKKDF-ESIPFVSSELVK 554
Query: 671 MYFKCGKIKLARLLFEEMDKIDVVVWGAMISGFAHNRLHKEALEYLRWMVREGVEPNSVI 492
MY CG + A +F + + W A+I + +N L ++A++ M PN
Sbjct: 555 MYGSCGLVHSAESVFNAVPVKGSMTWTAIIEAYGYNSLWQDAIKLFDEMRSRKFTPNDFT 614
Query: 491 LTAALPAVGE 462
L E
Sbjct: 615 FKVVLSICDE 624