BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025883
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72053.1| hypothetical protein VITISV_031314 [Vitis vinifera]    60   1e-07
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    59   4e-07
emb|CAN76156.1| hypothetical protein VITISV_041487 [Vitis vinifera]    59   4e-07
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    59   5e-07
ref|XP_002265763.2| PREDICTED: uncharacterized protein LOC100252...    59   5e-07

>emb|CAN72053.1| hypothetical protein VITISV_031314 [Vitis vinifera]
          Length = 780

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
 Frame = +1

Query: 49  SKNLGSTKKALNLWNKVTFGNIFEQIKDLRLNIASF-----QMKAPTAENIFLEKTALNK 213
           S+ L + K +L +WN+  FGN+  + KD  L    F       +  +AE   L K AL +
Sbjct: 180 SQKLKALKASLKIWNREVFGNVTVR-KDSALKEMMFWDSIEMDRVLSAEEQNLRKQALEE 238

Query: 214 LDNLLECEESFWKQKSRDVDIKEGDRNTMYFH 309
              L+  EE+ W+QKSR++ ++EGDRNT +FH
Sbjct: 239 YKKLVIMEETSWRQKSRELWLREGDRNTGFFH 270


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 36/88 (40%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
 Frame = +1

Query: 58  LGSTKKALNLWNKVTFGNIFEQIKDLRLNIASFQMKAPTAEN---IFLEKTALNKLDNLL 228
           L S    LN WNK  F NIF +  +L   I+  Q    T      I LE     ++D +L
Sbjct: 276 LKSFADKLNKWNKEEFYNIFRKKSELWARISGVQALLSTGRQNHLIKLEAKLRREMDIVL 335

Query: 229 ECEESFWKQKSRDVDIKEGDRNTMYFHI 312
           + EE+ W QKSR   I +GDRNT YFH+
Sbjct: 336 DDEETLWFQKSRMEAICDGDRNTRYFHL 363


>emb|CAN76156.1| hypothetical protein VITISV_041487 [Vitis vinifera]
          Length = 1734

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
 Frame = +1

Query: 43  IFSKNLGSTKKALNLWNKVTFGNIFEQIKDLRLNIASFQMKAPTAENIFLE-----KTAL 207
           I ++ L + K  L  WNK  FG +  Q K L LN+  F  +  +A ++ LE     K A 
Sbjct: 231 ILAEKLKALKLILRSWNKEVFGKVETQ-KQLALNLVDFWDEEESACSLSLEEEEARKEAR 289

Query: 208 NKLDNLLECEESFWKQKSRDVDIKEGDRNTMYFH 309
                 +  EE+ W+QKSR++ +KEGDRNT +F+
Sbjct: 290 ETYKKWVLLEEASWRQKSREIWLKEGDRNTRFFY 323


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/77 (38%), Positives = 43/77 (55%)
 Frame = +1

Query: 79  LNLWNKVTFGNIFEQIKDLRLNIASFQMKAPTAENIFLEKTALNKLDNLLECEESFWKQK 258
           L  WN+ TFG++ +++  LR  +   Q + PT+  I         LD +LE EE  WKQ+
Sbjct: 568 LKRWNQETFGSVKKKVASLREELDVLQRQPPTSNIICKRNEVECLLDGVLEREELLWKQR 627

Query: 259 SRDVDIKEGDRNTMYFH 309
           +R    K GDRNT +FH
Sbjct: 628 ARVSWFKCGDRNTQFFH 644


>ref|XP_002265763.2| PREDICTED: uncharacterized protein LOC100252823 [Vitis vinifera]
          Length = 1771

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
 Frame = +1

Query: 43  IFSKNLGSTKKALNLWNKVTFGNIFEQIKDLRLNIASFQMKAPTAENIFLE-----KTAL 207
           I ++ L + K  L  WNK  FG +  Q K L LN+  F  +  +A  + LE     K A 
Sbjct: 231 ILAEKLKALKLILRSWNKEVFGKVETQ-KQLALNLVDFWDEEESACTLSLEEEEARKEAR 289

Query: 208 NKLDNLLECEESFWKQKSRDVDIKEGDRNTMYFH 309
                 +  EE+ W+QKSR++ +KEGDRNT +F+
Sbjct: 290 ETYKKWVLLEEASWRQKSREIWLKEGDRNTRFFY 323