BLASTX nr result

ID: Coptis23_contig00025878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025878
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81130.1| hypothetical protein VITISV_003944 [Vitis vinifera]    87   2e-15
emb|CAN82574.1| hypothetical protein VITISV_034720 [Vitis vinifera]    87   2e-15
emb|CAN81994.1| hypothetical protein VITISV_043102 [Vitis vinifera]    87   2e-15
emb|CAN71109.1| hypothetical protein VITISV_001479 [Vitis vinifera]    87   2e-15
emb|CAN70932.1| hypothetical protein VITISV_040966 [Vitis vinifera]    87   2e-15

>emb|CAN81130.1| hypothetical protein VITISV_003944 [Vitis vinifera]
          Length = 1236

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 49/105 (46%), Positives = 65/105 (61%), Gaps = 20/105 (19%)
 Frame = +2

Query: 2    EHDGSKKYLAM----------------IFSP----NTFQSVFSIVVAEGLNLKQLNVKTA 121
            EHDGSK+Y A                 IFSP    +T + V  +V AE L+L+QL+VKTA
Sbjct: 815  EHDGSKRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTA 874

Query: 122  HLHCDHVEEIYTRQLLGFLRKDRENMVCKLRKSLHGSRQTPRRWY 256
             LH D  E++Y  Q  GF+ + +EN+VCKLRKSL+G +Q PR+WY
Sbjct: 875  FLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWY 919



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/46 (67%), Positives = 34/46 (73%)
 Frame = +2

Query: 257  MVCTHPDISHAVGVAWRFMANLGKHHWEAVKWILYYSWSITETCLC 394
            MVCT PDI+HAVGV  RFM+  GK HWEAVKWIL Y     +TCLC
Sbjct: 1031 MVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLC 1076


>emb|CAN82574.1| hypothetical protein VITISV_034720 [Vitis vinifera]
          Length = 1172

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 49/105 (46%), Positives = 65/105 (61%), Gaps = 20/105 (19%)
 Frame = +2

Query: 2    EHDGSKKYLAM----------------IFSP----NTFQSVFSIVVAEGLNLKQLNVKTA 121
            EHDGSK+Y A                 IFSP    +T + V  +V AE L+L+QL+VKTA
Sbjct: 777  EHDGSKRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTA 836

Query: 122  HLHCDHVEEIYTRQLLGFLRKDRENMVCKLRKSLHGSRQTPRRWY 256
             LH D  E++Y  Q  GF+ + +EN+VCKLRKSL+G +Q PR+WY
Sbjct: 837  FLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWY 881


>emb|CAN81994.1| hypothetical protein VITISV_043102 [Vitis vinifera]
          Length = 575

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 49/105 (46%), Positives = 65/105 (61%), Gaps = 20/105 (19%)
 Frame = +2

Query: 2   EHDGSKKYLAM----------------IFSP----NTFQSVFSIVVAEGLNLKQLNVKTA 121
           EHDGSK+Y A                 IFSP    +T + V  +V AE L+L+QL+VKTA
Sbjct: 140 EHDGSKRYKARLVVKGFQXKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTA 199

Query: 122 HLHCDHVEEIYTRQLLGFLRKDRENMVCKLRKSLHGSRQTPRRWY 256
            LH D  E++Y  Q  GF+ + +EN+VCKLRKSL+G +Q PR+WY
Sbjct: 200 FLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWY 244



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/46 (60%), Positives = 32/46 (69%)
 Frame = +2

Query: 257 MVCTHPDISHAVGVAWRFMANLGKHHWEAVKWILYYSWSITETCLC 394
           MVCT PDI+HAVGV  +FM+   K HWEAVKWIL Y     +T LC
Sbjct: 370 MVCTRPDIAHAVGVVSKFMSRPVKQHWEAVKWILRYLKGSLDTYLC 415


>emb|CAN71109.1| hypothetical protein VITISV_001479 [Vitis vinifera]
          Length = 1246

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 49/105 (46%), Positives = 65/105 (61%), Gaps = 20/105 (19%)
 Frame = +2

Query: 2    EHDGSKKYLAM----------------IFSP----NTFQSVFSIVVAEGLNLKQLNVKTA 121
            EHDGSK+Y A                 IFSP    +T + V  +V AE L+L+QL+VKTA
Sbjct: 811  EHDGSKRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTA 870

Query: 122  HLHCDHVEEIYTRQLLGFLRKDRENMVCKLRKSLHGSRQTPRRWY 256
             LH D  E++Y  Q  GF+ + +EN+VCKLRKSL+G +Q PR+WY
Sbjct: 871  FLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWY 915


>emb|CAN70932.1| hypothetical protein VITISV_040966 [Vitis vinifera]
          Length = 1212

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 49/105 (46%), Positives = 65/105 (61%), Gaps = 20/105 (19%)
 Frame = +2

Query: 2    EHDGSKKYLAM----------------IFSP----NTFQSVFSIVVAEGLNLKQLNVKTA 121
            EHDGSK+Y A                 IFSP    +T + V  +V AE L+L+QL+VKTA
Sbjct: 765  EHDGSKRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTA 824

Query: 122  HLHCDHVEEIYTRQLLGFLRKDRENMVCKLRKSLHGSRQTPRRWY 256
             LH D  E++Y  Q  GF+ + +EN+VCKLRKSL+G +Q PR+WY
Sbjct: 825  FLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWY 869


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