BLASTX nr result

ID: Coptis23_contig00025874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025874
         (920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29808.3| unnamed protein product [Vitis vinifera]              243   6e-62
ref|XP_002284389.1| PREDICTED: uncharacterized protein LOC100257...   243   6e-62
ref|XP_002527310.1| conserved hypothetical protein [Ricinus comm...   225   1e-56
emb|CAN74373.1| hypothetical protein VITISV_010199 [Vitis vinifera]   219   9e-55
ref|XP_004142675.1| PREDICTED: uncharacterized protein LOC101210...   211   2e-52

>emb|CBI29808.3| unnamed protein product [Vitis vinifera]
          Length = 281

 Score =  243 bits (619), Expect = 6e-62
 Identities = 124/238 (52%), Positives = 152/238 (63%), Gaps = 6/238 (2%)
 Frame = +1

Query: 61  NEDGHSLLSNSEPKLQFRNDIYKARWDAELGMAEVIEKKGVMWKTMGIFRWGKHYFSIEE 240
           +E+ H   S+S  KLQFR D+ KA W+  + MAEV+E KG MW T G+   GK Y SIEE
Sbjct: 43  DEEEHYYTSSSISKLQFRKDVSKAIWNDAMRMAEVVEMKGKMWTTTGMLHSGKIYCSIEE 102

Query: 241 TXXXXXXXXXXXXDEKDTIFTLKNIYKMVADANDGCCWESFKAFRHLKSLGYIVARHGVP 420
           T            D+ D   +LK IY  V+    GCCWESF+A+RHLKSLGYIV RHG+P
Sbjct: 103 TLFLAELGALHLLDDNDVPISLKGIYDKVSQGKCGCCWESFEAYRHLKSLGYIVGRHGIP 162

Query: 421 WTLKN-----DNPQGIPESDTVSGREMEDTISVSSLLQSMQINNLRLAFDVYLPNSNFRI 585
           WT K      D+ QG PE ++ +    E+  S   L+ +M I  ++L FDVYLPNS FR 
Sbjct: 163 WTSKGAKTCLDSHQGTPEGNSRTDEGSEEENSTIELVNNMHITEVKLLFDVYLPNSKFRK 222

Query: 586 SSPGDPDFVLCIAR-DPPSKIEIENLERRCNGVPLKICNVEHGLVSFFSFNKTELPVL 756
           SSPGDP FVLC+ R  PP K EIE+LERRC  +P K  +V HG VSFFSFN+ ELPVL
Sbjct: 223 SSPGDPSFVLCLTRGHPPLKTEIEDLERRCGSIPFKFFHVSHGRVSFFSFNRVELPVL 280


>ref|XP_002284389.1| PREDICTED: uncharacterized protein LOC100257347 [Vitis vinifera]
          Length = 255

 Score =  243 bits (619), Expect = 6e-62
 Identities = 124/238 (52%), Positives = 152/238 (63%), Gaps = 6/238 (2%)
 Frame = +1

Query: 61  NEDGHSLLSNSEPKLQFRNDIYKARWDAELGMAEVIEKKGVMWKTMGIFRWGKHYFSIEE 240
           +E+ H   S+S  KLQFR D+ KA W+  + MAEV+E KG MW T G+   GK Y SIEE
Sbjct: 17  DEEEHYYTSSSISKLQFRKDVSKAIWNDAMRMAEVVEMKGKMWTTTGMLHSGKIYCSIEE 76

Query: 241 TXXXXXXXXXXXXDEKDTIFTLKNIYKMVADANDGCCWESFKAFRHLKSLGYIVARHGVP 420
           T            D+ D   +LK IY  V+    GCCWESF+A+RHLKSLGYIV RHG+P
Sbjct: 77  TLFLAELGALHLLDDNDVPISLKGIYDKVSQGKCGCCWESFEAYRHLKSLGYIVGRHGIP 136

Query: 421 WTLKN-----DNPQGIPESDTVSGREMEDTISVSSLLQSMQINNLRLAFDVYLPNSNFRI 585
           WT K      D+ QG PE ++ +    E+  S   L+ +M I  ++L FDVYLPNS FR 
Sbjct: 137 WTSKGAKTCLDSHQGTPEGNSRTDEGSEEENSTIELVNNMHITEVKLLFDVYLPNSKFRK 196

Query: 586 SSPGDPDFVLCIAR-DPPSKIEIENLERRCNGVPLKICNVEHGLVSFFSFNKTELPVL 756
           SSPGDP FVLC+ R  PP K EIE+LERRC  +P K  +V HG VSFFSFN+ ELPVL
Sbjct: 197 SSPGDPSFVLCLTRGHPPLKTEIEDLERRCGSIPFKFFHVSHGRVSFFSFNRVELPVL 254


>ref|XP_002527310.1| conserved hypothetical protein [Ricinus communis]
           gi|223533310|gb|EEF35062.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score =  225 bits (573), Expect = 1e-56
 Identities = 114/228 (50%), Positives = 150/228 (65%), Gaps = 6/228 (2%)
 Frame = +1

Query: 91  SEPKLQFRNDIYKARWDAELGMAEVIEKKGVMWKTMGIFRWGKHYFSIEETXXXXXXXXX 270
           S PKLQFR+DI KARW+AE+GMAE++EKKG +W   GI R GK Y SIEET         
Sbjct: 33  SLPKLQFRSDISKARWNAEMGMAELVEKKGKLWTNTGIARSGKTYCSIEETLFLAELGAL 92

Query: 271 XXXDEKDTIFTLKNIYKMVADANDGCCWESFKAFRHLKSLGYIVARHGVPWTLKN----- 435
              D++ T  +LK++Y  +     GCC E F+ +RHLKSLGYIV RHGVPW++K      
Sbjct: 93  VLMDDEGTCLSLKDLYGKMGYQKSGCCSELFEVYRHLKSLGYIVGRHGVPWSMKGVKSTC 152

Query: 436 DNPQGIPESDTVSGREMEDTISVSSLLQSMQINNLRLAFDVYLPNSNFRISSPGDPDFVL 615
            +      +  V   E+++T S+   L+++Q++ LRL FDVYLPNS FR SSPG+P F L
Sbjct: 153 QSDSTHENNGVVIDNEVKETASIVQRLRNLQVDELRLDFDVYLPNSKFRKSSPGEPAFFL 212

Query: 616 CIAR-DPPSKIEIENLERRCNGVPLKICNVEHGLVSFFSFNKTELPVL 756
           C+ R  PPS  +IE +ER+C  VPLK C V++G +S FSF + ELPVL
Sbjct: 213 CLIRGSPPSTSKIEAVERQCGEVPLKFCQVDNGRISIFSFQRIELPVL 260


>emb|CAN74373.1| hypothetical protein VITISV_010199 [Vitis vinifera]
          Length = 1843

 Score =  219 bits (557), Expect = 9e-55
 Identities = 112/223 (50%), Positives = 139/223 (62%), Gaps = 6/223 (2%)
 Frame = +1

Query: 61   NEDGHSLLSNSEPKLQFRNDIYKARWDAELGMAEVIEKKGVMWKTMGIFRWGKHYFSIEE 240
            +E+ H   S+S  KLQFR D+ KA W+  + MAEV+E KG MW T G+   GK Y SIEE
Sbjct: 1046 DEEEHYYTSSSISKLQFRKDVSKAIWNDAMRMAEVVEMKGKMWTTTGMLHSGKIYCSIEE 1105

Query: 241  TXXXXXXXXXXXXDEKDTIFTLKNIYKMVADANDGCCWESFKAFRHLKSLGYIVARHGVP 420
            T            D+ D   +LK IY  V+    GCCWESF+A+RHLKSLGYIV RHG+P
Sbjct: 1106 TLFLAELGALHLLDDXDVPISLKGIYDKVSQGKCGCCWESFEAYRHLKSLGYIVGRHGIP 1165

Query: 421  WTLKN-----DNPQGIPESDTVSGREMEDTISVSSLLQSMQINNLRLAFDVYLPNSNFRI 585
            WT K      D+ QG PE ++ +    E+  S   L+ +M I  ++L FDVYLPNS FR 
Sbjct: 1166 WTSKGXKTCLDSHQGTPEGNSRTDXGSEEENSTIELVNNMHITEVKLLFDVYLPNSKFRK 1225

Query: 586  SSPGDPDFVLCIAR-DPPSKIEIENLERRCNGVPLKICNVEHG 711
            SSPGDP FVLC+ R  PP K EIE+LERRC  +P K  +V HG
Sbjct: 1226 SSPGDPSFVLCLTRGHPPLKAEIEDLERRCGSIPFKFFHVSHG 1268


>ref|XP_004142675.1| PREDICTED: uncharacterized protein LOC101210680 [Cucumis sativus]
           gi|449525862|ref|XP_004169935.1| PREDICTED:
           uncharacterized LOC101210680 [Cucumis sativus]
          Length = 267

 Score =  211 bits (537), Expect = 2e-52
 Identities = 109/227 (48%), Positives = 146/227 (64%), Gaps = 8/227 (3%)
 Frame = +1

Query: 100 KLQFRNDIYKARWDAELGMAEVIEKKGVMWKTMGIFRWGKHYFSIEETXXXXXXXXXXXX 279
           KLQFR     ARW+ ++GMAEV+E KG +W T GI R GK Y SIEET            
Sbjct: 41  KLQFRKHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL 100

Query: 280 DEKDTIFTLKNIYKMVADANDGCCWESFKAFRHLKSLGYIVARHGVPWTLKN-------D 438
           D  ++  +LK++YK VA+   G  WE F+ +RHLKSLGYIV +H VPW+LKN        
Sbjct: 101 DHDNSSLSLKDVYKKVAEGRSGRLWEQFEVYRHLKSLGYIVGKHRVPWSLKNVRNDCDIS 160

Query: 439 NPQGIPESDTVSGREMEDTISVSSLLQSMQINNLRLAFDVYLPNSNFRISSPGDPDFVLC 618
           +P    E+   S  + +D  S+  LL ++Q++ +   FDV+LP++ FR SSPGDP+F++C
Sbjct: 161 SPSS-TENKGASDVKSDDEQSICRLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVC 219

Query: 619 IARD-PPSKIEIENLERRCNGVPLKICNVEHGLVSFFSFNKTELPVL 756
           + R  PPSK EIE LER   G+P+K C+VEHG V FFSF+K ELP+L
Sbjct: 220 LTRGYPPSKEEIEVLERTSRGIPMKYCHVEHGRVCFFSFDKVELPLL 266


Top