BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025857
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis]     75   4e-12
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]     75   4e-12
gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]     74   2e-11
gb|ABD63157.1| Retrotransposon gag protein [Asparagus officinalis]     72   5e-11
emb|CAN64603.1| hypothetical protein VITISV_033149 [Vitis vinifera]    72   6e-11

>gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 321

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 39/114 (34%), Positives = 64/114 (56%)
 Frame = -3

Query: 344 WLTTQSLNYVDS*ANLVQLFMEQFYLPLKTDEMLQKIHFFRHNPHESFSEAWNRFTDLLI 165
           WL +   N + +    V +F+++F+   KT ++   I  F+  P E F + ++RF DLLI
Sbjct: 93  WLYSLPTNSISTWEEFVTVFLKKFFPIHKTVKLRNSIQNFKIVPGEPFWKYFDRFKDLLI 152

Query: 164 ECPHHNLAKYTLVCAFFKGLLHHHKEVLDIMTGSSFLSKGASEAYRFLEDQAKR 3
           +CPHH L K+ L    ++GL +  K  L+ M    F+ K A EA+ FLE  +++
Sbjct: 153 QCPHHGLEKWRLCQVIYEGLDYSSKTSLESMCQGDFMRKNADEAWEFLESLSEK 206


>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 39/114 (34%), Positives = 64/114 (56%)
 Frame = -3

Query: 344 WLTTQSLNYVDS*ANLVQLFMEQFYLPLKTDEMLQKIHFFRHNPHESFSEAWNRFTDLLI 165
           WL +   N + +    V +F+++F+   KT ++   I  F+  P E F + ++RF DLLI
Sbjct: 25  WLYSLPTNSISTWEEFVTVFLKKFFPIHKTVKLRNSIQNFKIVPGEPFWKYFDRFKDLLI 84

Query: 164 ECPHHNLAKYTLVCAFFKGLLHHHKEVLDIMTGSSFLSKGASEAYRFLEDQAKR 3
           +CPHH L K+ L    ++GL +  K  L+ M    F+ K A EA+ FLE  +++
Sbjct: 85  QCPHHGLEKWRLCQVIYEGLDYSSKTSLESMCQGDFMRKNADEAWEFLESLSEK 138


>gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 275

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/113 (29%), Positives = 61/113 (53%)
 Frame = -3

Query: 344 WLTTQSLNYVDS*ANLVQLFMEQFYLPLKTDEMLQKIHFFRHNPHESFSEAWNRFTDLLI 165
           WL +     + +   L + F+ +++ P KT ++  +I  F     ES  +AW R+ DLL 
Sbjct: 25  WLQSLPPGSITTWDQLSEAFLAKYFPPSKTAQLRNQITTFTQKEGESLYDAWERYKDLLR 84

Query: 164 ECPHHNLAKYTLVCAFFKGLLHHHKEVLDIMTGSSFLSKGASEAYRFLEDQAK 6
            CPHH L  + ++  F+ GLL++ +  +D   G + ++K   +A + +ED A+
Sbjct: 85  MCPHHGLEDWLIIHTFYNGLLYNTRMTVDAAAGGALMNKSVRDAKQLIEDMAQ 137


>gb|ABD63157.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 279

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/114 (33%), Positives = 63/114 (55%)
 Frame = -3

Query: 344 WLTTQSLNYVDS*ANLVQLFMEQFYLPLKTDEMLQKIHFFRHNPHESFSEAWNRFTDLLI 165
           WL +   N + +    V +F+++ +   KT ++   I  F+  P E F + ++RF DLLI
Sbjct: 95  WLYSLPTNSISTWDEFVTVFLKKIFPIHKTVKLRNSIQNFKIIPGEPFWKYFDRFKDLLI 154

Query: 164 ECPHHNLAKYTLVCAFFKGLLHHHKEVLDIMTGSSFLSKGASEAYRFLEDQAKR 3
           +CPHH L K+ L    ++GL +  K  L+ M    F+ K A EA+ FLE  +++
Sbjct: 155 QCPHHGLEKWRLCQIIYEGLDYSAKTSLESMCHGDFMRKNADEAWEFLESLSEK 208


>emb|CAN64603.1| hypothetical protein VITISV_033149 [Vitis vinifera]
          Length = 1554

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/108 (32%), Positives = 58/108 (53%)
 Frame = -3

Query: 344 WLTTQSLNYVDS*ANLVQLFMEQFYLPLKTDEMLQKIHFFRHNPHESFSEAWNRFTDLLI 165
           WL +  L  + +  +L   F+++F+   KT+ + ++I  F    +E F E W R+T+ + 
Sbjct: 145 WLNSLRLRSICTWTDLQAEFLKKFFPTHKTNGLKRQISNFSAKENEKFYECWERYTEAIN 204

Query: 164 ECPHHNLAKYTLVCAFFKGLLHHHKEVLDIMTGSSFLSKGASEAYRFL 21
            CPHH    + LV  F+ G+    K++L+ M G  F+SK   EA  FL
Sbjct: 205 ACPHHGFDTWLLVSYFYDGMSSSMKQLLETMCGGDFMSKNLEEAMDFL 252