BLASTX nr result

ID: Coptis23_contig00025854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025854
         (1310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281337.2| PREDICTED: BTB/POZ domain-containing protein...   311   2e-82
ref|XP_002515696.1| Root phototropism protein, putative [Ricinus...   311   2e-82
ref|XP_002327917.1| predicted protein [Populus trichocarpa] gi|2...   296   1e-77
ref|XP_002271481.2| PREDICTED: uncharacterized protein LOC100263...   289   1e-75
emb|CBI38340.3| unnamed protein product [Vitis vinifera]              289   1e-75

>ref|XP_002281337.2| PREDICTED: BTB/POZ domain-containing protein At3g22104-like [Vitis
            vinifera] gi|296081221|emb|CBI17965.3| unnamed protein
            product [Vitis vinifera]
          Length = 544

 Score =  311 bits (798), Expect = 2e-82
 Identities = 159/283 (56%), Positives = 198/283 (69%), Gaps = 2/283 (0%)
 Frame = +3

Query: 468  LEVDVNGQEVFFVNKRTLTSFSVKLSKLFHKSTGSRKNLKVIFHDLPGGAKGFEFMARFC 647
            L+VDVNG+E F V+K+ ++SFS +LSKLF KS  S  N KVIFHD PGG + FE + RFC
Sbjct: 7    LQVDVNGEETFMVDKKIISSFSGRLSKLFAKSRSSVNNFKVIFHDFPGGGENFELVTRFC 66

Query: 648  YNNGRAEITPTNVVVLHCVALFMEMTKEVSGSLSLIEQTELSLKEISYWSWSELLVALKQ 827
            YNNG  EI P+N+ +L+  A FMEM + VS   +L+EQTE SL++ISYWSWSELLVALKQ
Sbjct: 67   YNNGIIEINPSNIALLNRAAHFMEMNESVSRRHNLLEQTEKSLEQISYWSWSELLVALKQ 126

Query: 828  CQSFMAVADSSGLVIKLIDSLVGRLRLV--XXXXXXXXXXXXXXXGFRYSCDTKSTESTK 1001
            CQ    VA SSG++ K +DSL+GR+ L                  GFR+SCDT+STES K
Sbjct: 127  CQDLPPVAKSSGILQKCLDSLIGRVALASGSEASPYPSNSSPDSSGFRFSCDTRSTESLK 186

Query: 1002 NCFSRTNWWFDDLVVFNIEMIEKAVKVMITQKFDNRAICRFLLNYQKNKCATATMDEKRK 1181
            N FSR  WWF+DL+V N  ++E  VK M+++K+D+  I RFL  YQK+K  TAT  EKRK
Sbjct: 187  NSFSRVTWWFEDLLVLNPNLVEMVVKSMLSRKYDHAIISRFLFYYQKSKFVTATSVEKRK 246

Query: 1182 TTETLIDLLSTLDQCAVPCKSLFGILRVAFGLNICKSCRNKLE 1310
              E+++DL   LDQ +V CKSLFGILRVA  LNI K CR KLE
Sbjct: 247  IIESVVDLFCFLDQSSVSCKSLFGILRVALSLNISKGCRIKLE 289


>ref|XP_002515696.1| Root phototropism protein, putative [Ricinus communis]
            gi|223545133|gb|EEF46643.1| Root phototropism protein,
            putative [Ricinus communis]
          Length = 542

 Score =  311 bits (797), Expect = 2e-82
 Identities = 153/281 (54%), Positives = 202/281 (71%)
 Frame = +3

Query: 468  LEVDVNGQEVFFVNKRTLTSFSVKLSKLFHKSTGSRKNLKVIFHDLPGGAKGFEFMARFC 647
            LEVDVNG+E F V+K+ ++S+S +LSKLF KSTGS +N KVIF+D PGGA+ FE M+RFC
Sbjct: 7    LEVDVNGEETFVVDKKLISSYSGRLSKLFGKSTGSSRNFKVIFNDFPGGAEIFELMSRFC 66

Query: 648  YNNGRAEITPTNVVVLHCVALFMEMTKEVSGSLSLIEQTELSLKEISYWSWSELLVALKQ 827
            YN GR  ITP N+++LHC A FMEM+  VSG+ +L+EQ+E SL+EI+ W+WSELL+ +KQ
Sbjct: 67   YNKGRINITPYNILLLHCAAQFMEMSSCVSGTQNLLEQSEKSLQEINEWTWSELLITIKQ 126

Query: 828  CQSFMAVADSSGLVIKLIDSLVGRLRLVXXXXXXXXXXXXXXXGFRYSCDTKSTESTKNC 1007
            CQ  + + +S  ++ K +DSLVG++ L                  R+SCDT+STES KN 
Sbjct: 127  CQGLVPLTNSLSVLEKCMDSLVGKIALSSESSPCLSTSSPDSSSIRFSCDTRSTESLKNS 186

Query: 1008 FSRTNWWFDDLVVFNIEMIEKAVKVMITQKFDNRAICRFLLNYQKNKCATATMDEKRKTT 1187
            FSR  WWF+DL+  + ++++  VK M+ QKFD+  I RFL  YQK K  +AT +EKR+  
Sbjct: 187  FSRATWWFEDLLFLSSDLVKMLVKSMVFQKFDHPIISRFLFYYQKTKSHSATSNEKREIV 246

Query: 1188 ETLIDLLSTLDQCAVPCKSLFGILRVAFGLNICKSCRNKLE 1310
            ET+ID+L  LD  +V CKSLFGILRVA  LNI KSCRNKLE
Sbjct: 247  ETVIDMLYILDWSSVSCKSLFGILRVALNLNISKSCRNKLE 287


>ref|XP_002327917.1| predicted protein [Populus trichocarpa] gi|222837326|gb|EEE75705.1|
            predicted protein [Populus trichocarpa]
          Length = 515

 Score =  296 bits (757), Expect = 1e-77
 Identities = 147/281 (52%), Positives = 190/281 (67%)
 Frame = +3

Query: 468  LEVDVNGQEVFFVNKRTLTSFSVKLSKLFHKSTGSRKNLKVIFHDLPGGAKGFEFMARFC 647
            LEVDVNG+E F V+K+ + S+  +LSKL  K TGS +NLKVIF+D PGGA+ FE M+RFC
Sbjct: 7    LEVDVNGEETFMVDKKIIASYCGRLSKLSGKPTGSARNLKVIFNDFPGGAESFELMSRFC 66

Query: 648  YNNGRAEITPTNVVVLHCVALFMEMTKEVSGSLSLIEQTELSLKEISYWSWSELLVALKQ 827
            YNNGR  ITP+N+  LH  A FMEM   VSG+ +L+E+T  SLKE++YW+WSELL+  K+
Sbjct: 67   YNNGRTAITPSNISFLHSAAQFMEMNNSVSGTHNLLEETGKSLKEMNYWTWSELLITTKK 126

Query: 828  CQSFMAVADSSGLVIKLIDSLVGRLRLVXXXXXXXXXXXXXXXGFRYSCDTKSTESTKNC 1007
            CQ  +   +S+G++ K +DSL+GR+                  G R SCDT+STES KN 
Sbjct: 127  CQDLLPFPNSTGILEKCVDSLIGRITTSGEPSPCPSTSSPDSSGVRLSCDTRSTESLKNS 186

Query: 1008 FSRTNWWFDDLVVFNIEMIEKAVKVMITQKFDNRAICRFLLNYQKNKCATATMDEKRKTT 1187
            FSR  WWF+DL+V +  ++    K M++QKFD+  I RFL  YQK+KC T T DEKRK  
Sbjct: 187  FSRATWWFEDLLVLSTNLVGMVFKSMVSQKFDHVIISRFLFYYQKSKCYTGTSDEKRKVV 246

Query: 1188 ETLIDLLSTLDQCAVPCKSLFGILRVAFGLNICKSCRNKLE 1310
            ET+ID+L  L+  +V  KSLFGILRVA   N  K  R KLE
Sbjct: 247  ETVIDMLYILNWNSVSFKSLFGILRVALNCNTRKCSRTKLE 287


>ref|XP_002271481.2| PREDICTED: uncharacterized protein LOC100263747 [Vitis vinifera]
          Length = 1826

 Score =  289 bits (740), Expect = 1e-75
 Identities = 145/281 (51%), Positives = 194/281 (69%)
 Frame = +3

Query: 468  LEVDVNGQEVFFVNKRTLTSFSVKLSKLFHKSTGSRKNLKVIFHDLPGGAKGFEFMARFC 647
            LEVDVNG+E F ++K+ L +FS KLS+LF   T     LKVI  D PGGA+GFE +ARFC
Sbjct: 7    LEVDVNGEETFLLDKKILITFSSKLSRLFSGLTRKAGTLKVILPDFPGGAEGFELIARFC 66

Query: 648  YNNGRAEITPTNVVVLHCVALFMEMTKEVSGSLSLIEQTELSLKEISYWSWSELLVALKQ 827
            YNNGRAEI+P N V+L+C A FMEM +  SG+ SL+ QTE SL+EI+ W+WS+LLVALKQ
Sbjct: 67   YNNGRAEISPVNAVLLNCAACFMEMDQVCSGTPSLLHQTEKSLEEINSWTWSQLLVALKQ 126

Query: 828  CQSFMAVADSSGLVIKLIDSLVGRLRLVXXXXXXXXXXXXXXXGFRYSCDTKSTESTKNC 1007
            CQ  +   +SS L+ K++DSLVGRL L                 F+ S D++ST+S KN 
Sbjct: 127  CQDLLPAMNSSCLLQKILDSLVGRLALPSVVSPCTPSSSSGCSSFQLSSDSRSTDSVKNS 186

Query: 1008 FSRTNWWFDDLVVFNIEMIEKAVKVMITQKFDNRAICRFLLNYQKNKCATATMDEKRKTT 1187
            +SRT WWF+DLV  N ++I+K +K+M++QK D+  + RFL  YQK++   A   EK KTT
Sbjct: 187  WSRTTWWFEDLVFLNADLIDKVIKMMVSQKLDHVTLSRFLFYYQKSRFLIAGPAEKSKTT 246

Query: 1188 ETLIDLLSTLDQCAVPCKSLFGILRVAFGLNICKSCRNKLE 1310
            E ++ LLS+LD+ +V CK L+ ILR+A  L + K C+N LE
Sbjct: 247  EVVVTLLSSLDRSSVSCKGLYDILRMALSLKVSKCCKNILE 287


>emb|CBI38340.3| unnamed protein product [Vitis vinifera]
          Length = 535

 Score =  289 bits (740), Expect = 1e-75
 Identities = 145/281 (51%), Positives = 194/281 (69%)
 Frame = +3

Query: 468  LEVDVNGQEVFFVNKRTLTSFSVKLSKLFHKSTGSRKNLKVIFHDLPGGAKGFEFMARFC 647
            LEVDVNG+E F ++K+ L +FS KLS+LF   T     LKVI  D PGGA+GFE +ARFC
Sbjct: 7    LEVDVNGEETFLLDKKILITFSSKLSRLFSGLTRKAGTLKVILPDFPGGAEGFELIARFC 66

Query: 648  YNNGRAEITPTNVVVLHCVALFMEMTKEVSGSLSLIEQTELSLKEISYWSWSELLVALKQ 827
            YNNGRAEI+P N V+L+C A FMEM +  SG+ SL+ QTE SL+EI+ W+WS+LLVALKQ
Sbjct: 67   YNNGRAEISPVNAVLLNCAACFMEMDQVCSGTPSLLHQTEKSLEEINSWTWSQLLVALKQ 126

Query: 828  CQSFMAVADSSGLVIKLIDSLVGRLRLVXXXXXXXXXXXXXXXGFRYSCDTKSTESTKNC 1007
            CQ  +   +SS L+ K++DSLVGRL L                 F+ S D++ST+S KN 
Sbjct: 127  CQDLLPAMNSSCLLQKILDSLVGRLALPSVVSPCTPSSSSGCSSFQLSSDSRSTDSVKNS 186

Query: 1008 FSRTNWWFDDLVVFNIEMIEKAVKVMITQKFDNRAICRFLLNYQKNKCATATMDEKRKTT 1187
            +SRT WWF+DLV  N ++I+K +K+M++QK D+  + RFL  YQK++   A   EK KTT
Sbjct: 187  WSRTTWWFEDLVFLNADLIDKVIKMMVSQKLDHVTLSRFLFYYQKSRFLIAGPAEKSKTT 246

Query: 1188 ETLIDLLSTLDQCAVPCKSLFGILRVAFGLNICKSCRNKLE 1310
            E ++ LLS+LD+ +V CK L+ ILR+A  L + K C+N LE
Sbjct: 247  EVVVTLLSSLDRSSVSCKGLYDILRMALSLKVSKCCKNILE 287


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