BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025845
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26532.3| unnamed protein product [Vitis vinifera]              111   7e-23
ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat...   111   7e-23
ref|XP_002532784.1| pentatricopeptide repeat-containing protein,...   108   4e-22
ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat...   105   3e-21
ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat...   102   3e-20

>emb|CBI26532.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/117 (47%), Positives = 79/117 (67%)
 Frame = -1

Query: 408 AERHLKLMEMKGFKSNLVASNCLLNGLCQAGQVEDAMKAFGRMEYKDDFTYSMMVHALCK 229
           A RHLK M   GF S LVA NC+++GLC+ GQ++ A+K F  ME KD FTYS MVH LCK
Sbjct: 325 ALRHLKNMTKMGFDSTLVAQNCVIDGLCKVGQLDHAIKMFASMEVKDSFTYSSMVHNLCK 384

Query: 228 AKQFFAAARLIKTSLIEDVKVLKSAQKATVFGLRSTGYKREASQLRSAIAVAKYTRY 58
           A+++  A+RL+   L   +K+L++ Q++ + GL  +GY  EA +L+S I +A+   Y
Sbjct: 385 ARRYRHASRLLLACLRGGMKILRANQRSVIDGLCYSGYTSEARRLKSKIRLARILHY 441


>ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Vitis vinifera]
          Length = 457

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/117 (47%), Positives = 79/117 (67%)
 Frame = -1

Query: 408 AERHLKLMEMKGFKSNLVASNCLLNGLCQAGQVEDAMKAFGRMEYKDDFTYSMMVHALCK 229
           A RHLK M   GF S LVA NC+++GLC+ GQ++ A+K F  ME KD FTYS MVH LCK
Sbjct: 341 ALRHLKNMTKMGFDSTLVAQNCVIDGLCKVGQLDHAIKMFASMEVKDSFTYSSMVHNLCK 400

Query: 228 AKQFFAAARLIKTSLIEDVKVLKSAQKATVFGLRSTGYKREASQLRSAIAVAKYTRY 58
           A+++  A+RL+   L   +K+L++ Q++ + GL  +GY  EA +L+S I +A+   Y
Sbjct: 401 ARRYRHASRLLLACLRGGMKILRANQRSVIDGLCYSGYTSEARRLKSKIRLARILHY 457


>ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527472|gb|EEF29603.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 487

 Score =  108 bits (270), Expect = 4e-22
 Identities = 51/113 (45%), Positives = 80/113 (70%)
 Frame = -1

Query: 408 AERHLKLMEMKGFKSNLVASNCLLNGLCQAGQVEDAMKAFGRMEYKDDFTYSMMVHALCK 229
           A RH++ M M GF S LVA NC+++GLC+ GQ++ A+K F  M+ +D FTYS +VH LCK
Sbjct: 371 ARRHMQHMNMMGFDSCLVALNCMVDGLCKNGQIDHAVKLFESMKMRDSFTYSSLVHNLCK 430

Query: 228 AKQFFAAARLIKTSLIEDVKVLKSAQKATVFGLRSTGYKREASQLRSAIAVAK 70
             +F  A++L+ + L   +K+L SAQ+  + GLR +G+++EA +L+S I +A+
Sbjct: 431 NGRFHRASKLLLSCLRSGMKILPSAQRVVISGLRYSGFQKEARKLKSKIKLAR 483


>ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Glycine max]
          Length = 461

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/114 (43%), Positives = 79/114 (69%)
 Frame = -1

Query: 408 AERHLKLMEMKGFKSNLVASNCLLNGLCQAGQVEDAMKAFGRMEYKDDFTYSMMVHALCK 229
           A+RHL  M   GF SNLVA NC L+GL +AG ++ A++ F  ME KD FTY+++VH LC+
Sbjct: 346 AQRHLNYMNSLGFGSNLVAFNCFLDGLGKAGHIDHALRLFEVMEVKDSFTYTIVVHNLCR 405

Query: 228 AKQFFAAARLIKTSLIEDVKVLKSAQKATVFGLRSTGYKREASQLRSAIAVAKY 67
           A++F  A++++ + L    +VL++ Q+A + GLRS GY  EA +++  I +A++
Sbjct: 406 ARRFLCASKVLVSCLKCGYQVLRATQRAVIVGLRSIGYANEARKVKLTIRLAQF 459


>ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
           gi|449468117|ref|XP_004151768.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
           gi|449532400|ref|XP_004173169.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
          Length = 456

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/116 (42%), Positives = 81/116 (69%)
 Frame = -1

Query: 408 AERHLKLMEMKGFKSNLVASNCLLNGLCQAGQVEDAMKAFGRMEYKDDFTYSMMVHALCK 229
           A +HL  +   GF SNLVA NCL++ LC+AGQ++ A++ F  ME +D FTY+ +VH LCK
Sbjct: 341 AMQHLNCVYTTGFASNLVALNCLIDRLCKAGQIDRAIRLFESMETRDSFTYTSLVHNLCK 400

Query: 228 AKQFFAAARLIKTSLIEDVKVLKSAQKATVFGLRSTGYKREASQLRSAIAVAKYTR 61
           A++F  A++L+ +   + +KVLK+ ++A + GL S+G+  EA +L+  + +A++ R
Sbjct: 401 ARRFRCASKLLISCSRDGMKVLKATRRAVIDGLCSSGFTSEARKLKFKLRLARHFR 456