BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025844
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612646.1| F-box family protein [Medicago truncatula] g...    83   4e-14
ref|XP_003612650.1| F-box family protein [Medicago truncatula] g...    81   1e-13
ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2...    80   3e-13
ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus ...    77   2e-12
ref|XP_003611119.1| F-box family protein [Medicago truncatula] g...    77   3e-12

>ref|XP_003612646.1| F-box family protein [Medicago truncatula]
           gi|355513981|gb|AES95604.1| F-box family protein
           [Medicago truncatula]
          Length = 441

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 61/187 (32%), Positives = 92/187 (49%), Gaps = 13/187 (6%)
 Frame = +2

Query: 116 IIGFVNGLLCLGEDHSRTQNSTKYVVYNPITGEQTELPWRSCIFMDID--FAAFGYDSAT 289
           ++   NGLLCL E ++        VV NPI GE   LP    I        AA G+   T
Sbjct: 141 VVNSCNGLLCLSEPYTVNH----LVVCNPIIGEFIRLPEAIGIANTRKPICAALGFQPKT 196

Query: 290 NEYKVIRI---------RNDQYGAEVFTLGTTRWRRIQGHVPTITNKCPYSLLVNGNLHW 442
           NEYKVIR+         ++D    E+ TLGTT WR ++        +      VNG LHW
Sbjct: 197 NEYKVIRMWKRCDGWCYKSDVMVVEMHTLGTTTWRNVEVDPMFSFTRLGSPTCVNGALHW 256

Query: 443 ISC-EPDEPLAIVAFNVASEKFHKLESPPFFMPEFNVRKIRLQVIE-EQLCFIFEKTLDQ 616
           I+  + ++  +I+ FN  SEKF    SP    P  + +++ + ++E +   +I E T++ 
Sbjct: 257 INYDDKNKTRSILCFNFESEKFQSFPSP----PHPHHKRLSITMVELKGFLYICESTVNS 312

Query: 617 FEIWVMK 637
             +W+MK
Sbjct: 313 CVVWLMK 319


>ref|XP_003612650.1| F-box family protein [Medicago truncatula]
           gi|355513985|gb|AES95608.1| F-box family protein
           [Medicago truncatula]
          Length = 441

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 13/187 (6%)
 Frame = +2

Query: 116 IIGFVNGLLCLGEDHSRTQNSTKYVVYNPITGEQTELPWRSCIFMDID--FAAFGYDSAT 289
           ++   NGLLCL E ++        VV NPI GE   LP    I        AA G+   T
Sbjct: 141 VVNSCNGLLCLSEPYTVNH----LVVCNPIIGEFIRLPEAIGIANTRKPICAALGFQPKT 196

Query: 290 NEYKVIRI---------RNDQYGAEVFTLGTTRWRRIQGHVPTITNKCPYSLLVNGNLHW 442
           NEYKVIR+         ++D    E+ TLGT  WR ++        +      VNG LHW
Sbjct: 197 NEYKVIRMWKRCDGWCYKSDVMVVEMHTLGTATWRNVEVDPMFSFTRLGSPTCVNGALHW 256

Query: 443 ISC-EPDEPLAIVAFNVASEKFHKLESPPFFMPEFNVRKIRLQVIE-EQLCFIFEKTLDQ 616
           I+  + ++  +I+ FN  SEKF    SP    P  + +++ + ++E +   +I E T++ 
Sbjct: 257 INYDDKNKTRSILCFNFESEKFQSFPSP----PHPHHKRLSITMVELKGFLYICESTVNS 312

Query: 617 FEIWVMK 637
             +W+MK
Sbjct: 313 CVVWLMK 319


>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 58/181 (32%), Positives = 82/181 (45%), Gaps = 6/181 (3%)
 Frame = +2

Query: 113 QIIGFVNGLLCLGEDHSRTQNSTKYVVYNPITGEQTELPWRSCIFMDIDFAAFGYDSATN 292
           +I+   NGL+C+   HS    S    + NP+ G+   LP          F+ FG+   T+
Sbjct: 130 EIVNTCNGLICIRHFHSPNDIS----ILNPLVGDYITLPLTKKKHKSYVFSWFGHSPKTD 185

Query: 293 EYKVIRI--RNDQYGAEVFTLGTTRWRRIQGHV--PTITNKCPYSLLVNGNLHWISCEPD 460
           EYKVI+   +  +  AE+ TLG   W  I G    P I  +C ++  V G LHWI  +P 
Sbjct: 186 EYKVIQFVQQPSKLEAEIHTLGKGTWTSIHGGALSPPIDMRC-HNAFVGGCLHWIVNDPS 244

Query: 461 EPLAIVAFNVASEKFHKLESPPFFMPEFNVR--KIRLQVIEEQLCFIFEKTLDQFEIWVM 634
           +   I       E F  + +PP   P    R   + L V+   L F      D F+IWVM
Sbjct: 245 KSEFIYCLEFGRELFQPVAAPPHLGPNDKDRTGDMMLGVLGGCLYFFDYPLGDSFDIWVM 304

Query: 635 K 637
           K
Sbjct: 305 K 305


>ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223540440|gb|EEF42009.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 369

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 57/181 (31%), Positives = 89/181 (49%), Gaps = 6/181 (3%)
 Frame = +2

Query: 113 QIIGFVNGLLC--LGEDHSRTQNSTKYVVYNPITGEQTELPWRSCIFMDIDFAAFGYDSA 286
           + +G  NGL+    G DH  T       V+NP TGE  +LP  +    D  F  FGYDS 
Sbjct: 104 EFVGSCNGLISAVFGSDHEIT-------VWNPSTGESRKLPAPTSSTEDKLFYGFGYDSK 156

Query: 287 TNEYKVIRIRN----DQYGAEVFTLGTTRWRRIQGHVPTITNKCPYSLLVNGNLHWISCE 454
            ++YK++R  +    ++   EVF L   RWR IQ     +  +   ++ +NG LHW+  +
Sbjct: 157 LDDYKIVRGASSASCNEVQMEVFNLKGNRWRAIQNLHCNVRFQ-GSAIALNGILHWLVDQ 215

Query: 455 PDEPLAIVAFNVASEKFHKLESPPFFMPEFNVRKIRLQVIEEQLCFIFEKTLDQFEIWVM 634
            +E L IV+ ++A EKF ++   P ++ E       L+V+ + L          FE W +
Sbjct: 216 LNEGLMIVSLDLAEEKFLEMVVLPDYVTE--NWGTELKVLGDSLSVCSSSHTTNFEAWTV 273

Query: 635 K 637
           K
Sbjct: 274 K 274


>ref|XP_003611119.1| F-box family protein [Medicago truncatula]
           gi|355512454|gb|AES94077.1| F-box family protein
           [Medicago truncatula]
          Length = 560

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 61/196 (31%), Positives = 85/196 (43%), Gaps = 23/196 (11%)
 Frame = +2

Query: 116 IIGFVNGLLCLGEDHSRTQNSTKYVVYNPITGEQTELP-------WRSCIFMDIDFAAFG 274
           I+   NGLLCL E    T   +  V+ NP+T E T LP       W +   +    A FG
Sbjct: 261 IVNSCNGLLCLSE----TSIGSPLVICNPVTREFTILPELTTTSDWFNSARVQ---AGFG 313

Query: 275 YDSATNEYKVIRIRN-----------DQYGAEVFTLGTTRWRRIQGHVPTITNKCPYSLL 421
           +   TNEYKVI + N           ++   E+ TLGT+ WR ++        K      
Sbjct: 314 FQPKTNEYKVIIMWNKYVRRDNRLVFERVVLEIHTLGTSSWRNVEVDPQISFLKLLNPTC 373

Query: 422 VNGNLHWISCEPDEPLAIVAFNVASEKFHKLESPPFFMPEF-----NVRKIRLQVIEEQL 586
           VNG LHWI  E  +  +I+ FN  SE+     SPP           +   IRL  ++  L
Sbjct: 374 VNGALHWIIFEAWQQKSILCFNFESERLQSFPSPPHVFGNHDNGFPHSMPIRLGELKGFL 433

Query: 587 CFIFEKTLDQFEIWVM 634
                 +L+   +WVM
Sbjct: 434 YICHRSSLENVTMWVM 449