BLASTX nr result

ID: Coptis23_contig00025834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025834
         (1640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265027.2| PREDICTED: A/G-specific adenine DNA glycosyl...   531   e-148
emb|CBI25679.3| unnamed protein product [Vitis vinifera]              531   e-148
emb|CAN71629.1| hypothetical protein VITISV_015579 [Vitis vinifera]   518   e-144
ref|XP_002321221.1| predicted protein [Populus trichocarpa] gi|2...   516   e-144
ref|XP_002524570.1| A/G-specific adenine glycosylase muty, putat...   503   e-140

>ref|XP_002265027.2| PREDICTED: A/G-specific adenine DNA glycosylase [Vitis vinifera]
          Length = 464

 Score =  531 bits (1368), Expect = e-148
 Identities = 274/428 (64%), Positives = 327/428 (76%), Gaps = 7/428 (1%)
 Frame = +2

Query: 95   EEKGRENSD-DVEDMEDFGKEEENVNKIRASLLSWYYQNQRVFPWRT--RTTGNENHKDQ 265
            + K R  S+ +V D+EDFG++E    KIRASLL WY  N+R  PWRT   TT +E+  D 
Sbjct: 19   KRKQRTTSEIEVMDIEDFGRDE--TLKIRASLLGWYDLNKRNLPWRTPTTTTTHEDEDDA 76

Query: 266  KEGTSISKLAYGVWVSEMMLQQTRVTTVIDYYNRWMQKWPTIHHLACASQEEVNEMWAGL 445
                 +   AY VWVSE+MLQQTRV TVIDYYNRWMQKWPT+HHL+ AS EEVNEMWAGL
Sbjct: 77   DAHEDLDNRAYAVWVSEVMLQQTRVETVIDYYNRWMQKWPTLHHLSLASLEEVNEMWAGL 136

Query: 446  GYYRRARFLLEGAKMVVEGLGSEFPTTVSALRKVPGIGEYTAGAIASIAFNQAVPVVDGN 625
            GYYRRAR LLEGAKM+ EG    FP T SALR+VPGIG YTAGAIASIAF +AVPVVDGN
Sbjct: 137  GYYRRARCLLEGAKMISEGKCG-FPRTTSALREVPGIGNYTAGAIASIAFKEAVPVVDGN 195

Query: 626  VIRVLARLKTISANPKASATIKTFWKLAGQLVDSRRPGDFNQALMELGATICTPSSPGCS 805
            V+RV+ARLK IS+NPK SATIK  W+LAGQLVD  +PGDFNQALMELGATICTP  P CS
Sbjct: 196  VVRVIARLKAISSNPKHSATIKNIWRLAGQLVDPCKPGDFNQALMELGATICTPLKPICS 255

Query: 806  VCPISGQCRAFSLSKGHNSVTVTGYPTRVPKTKQRLEFCAVCVVEILDDQRPDTPRGARR 985
             CP+S QC   S+S+ H S+ VT YP +V K K+R +F AV VV+IL++Q  D  +G++ 
Sbjct: 256  ACPVSDQCSVLSMSESHRSILVTDYPVKVVKAKKRHDFSAVSVVKILEEQ--DISKGSQY 313

Query: 986  NNVFLLVKRPDEGLLAGLWEFPSVLMDGEAVLTVRKQAIDQYLKKSFKLDTKKMCTILSR 1165
            N+ FLLVKRP+EGLLAGLWEFPSVL+DGEA    R++ ID++L KSFKLDTKK C I+SR
Sbjct: 314  NSRFLLVKRPNEGLLAGLWEFPSVLLDGEADGATRRKRIDRFL-KSFKLDTKKNCRIVSR 372

Query: 1166 NHVGECMHIFSHIRLRMYVELLILRLKGGASFVYGKEE----AWKCVDSHSIQSIGLTSG 1333
              VGEC+H+F+HI L MYVELL+L LKGG    Y  E+     W+ +DS ++ S+GLTSG
Sbjct: 373  EDVGECVHVFTHIHLTMYVELLVLHLKGGMKISYENEDKETMTWRWIDSEALSSMGLTSG 432

Query: 1334 VRKVYNMV 1357
            VRKVYNM+
Sbjct: 433  VRKVYNMI 440


>emb|CBI25679.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  531 bits (1368), Expect = e-148
 Identities = 274/428 (64%), Positives = 327/428 (76%), Gaps = 7/428 (1%)
 Frame = +2

Query: 95   EEKGRENSD-DVEDMEDFGKEEENVNKIRASLLSWYYQNQRVFPWRT--RTTGNENHKDQ 265
            + K R  S+ +V D+EDFG++E    KIRASLL WY  N+R  PWRT   TT +E+  D 
Sbjct: 61   KRKQRTTSEIEVMDIEDFGRDE--TLKIRASLLGWYDLNKRNLPWRTPTTTTTHEDEDDA 118

Query: 266  KEGTSISKLAYGVWVSEMMLQQTRVTTVIDYYNRWMQKWPTIHHLACASQEEVNEMWAGL 445
                 +   AY VWVSE+MLQQTRV TVIDYYNRWMQKWPT+HHL+ AS EEVNEMWAGL
Sbjct: 119  DAHEDLDNRAYAVWVSEVMLQQTRVETVIDYYNRWMQKWPTLHHLSLASLEEVNEMWAGL 178

Query: 446  GYYRRARFLLEGAKMVVEGLGSEFPTTVSALRKVPGIGEYTAGAIASIAFNQAVPVVDGN 625
            GYYRRAR LLEGAKM+ EG    FP T SALR+VPGIG YTAGAIASIAF +AVPVVDGN
Sbjct: 179  GYYRRARCLLEGAKMISEGKCG-FPRTTSALREVPGIGNYTAGAIASIAFKEAVPVVDGN 237

Query: 626  VIRVLARLKTISANPKASATIKTFWKLAGQLVDSRRPGDFNQALMELGATICTPSSPGCS 805
            V+RV+ARLK IS+NPK SATIK  W+LAGQLVD  +PGDFNQALMELGATICTP  P CS
Sbjct: 238  VVRVIARLKAISSNPKHSATIKNIWRLAGQLVDPCKPGDFNQALMELGATICTPLKPICS 297

Query: 806  VCPISGQCRAFSLSKGHNSVTVTGYPTRVPKTKQRLEFCAVCVVEILDDQRPDTPRGARR 985
             CP+S QC   S+S+ H S+ VT YP +V K K+R +F AV VV+IL++Q  D  +G++ 
Sbjct: 298  ACPVSDQCSVLSMSESHRSILVTDYPVKVVKAKKRHDFSAVSVVKILEEQ--DISKGSQY 355

Query: 986  NNVFLLVKRPDEGLLAGLWEFPSVLMDGEAVLTVRKQAIDQYLKKSFKLDTKKMCTILSR 1165
            N+ FLLVKRP+EGLLAGLWEFPSVL+DGEA    R++ ID++L KSFKLDTKK C I+SR
Sbjct: 356  NSRFLLVKRPNEGLLAGLWEFPSVLLDGEADGATRRKRIDRFL-KSFKLDTKKNCRIVSR 414

Query: 1166 NHVGECMHIFSHIRLRMYVELLILRLKGGASFVYGKEE----AWKCVDSHSIQSIGLTSG 1333
              VGEC+H+F+HI L MYVELL+L LKGG    Y  E+     W+ +DS ++ S+GLTSG
Sbjct: 415  EDVGECVHVFTHIHLTMYVELLVLHLKGGMKISYENEDKETMTWRWIDSEALSSMGLTSG 474

Query: 1334 VRKVYNMV 1357
            VRKVYNM+
Sbjct: 475  VRKVYNMI 482


>emb|CAN71629.1| hypothetical protein VITISV_015579 [Vitis vinifera]
          Length = 1031

 Score =  518 bits (1335), Expect = e-144
 Identities = 274/450 (60%), Positives = 327/450 (72%), Gaps = 29/450 (6%)
 Frame = +2

Query: 95   EEKGRENSD-DVEDMEDFGKEEENVNKIRASLLSWYYQNQRVFPWRT--RTTGNENHKDQ 265
            + K R  S+ +V D+EDFG++E    KIRASLL WY  N+R  PWRT   TT +E+  D 
Sbjct: 564  KRKQRTTSEIEVMDIEDFGRDE--TLKIRASLLGWYDLNKRNLPWRTPTTTTTHEDEDDA 621

Query: 266  KEGTSISKLAYGVWVSEMMLQQTRVTTVIDYYNRWMQKWPTIHHLACASQEEVNEMWAGL 445
                 +   AY VWVSE+MLQQTRV TVIDYYNRWMQKWPT+HHL+ AS EEVNEMWAGL
Sbjct: 622  DAHEDLDNRAYAVWVSEVMLQQTRVETVIDYYNRWMQKWPTLHHLSLASLEEVNEMWAGL 681

Query: 446  GYYRRARFLLEGAKMVVEGLGSEFPTTVSALRKVPGIGEYTAGAIASIAFNQAVPVVDGN 625
            GYYRRAR LLEGAKM+ EG    FP T SALR+VPGIG YTAGAIASIAF +AVPVVDGN
Sbjct: 682  GYYRRARCLLEGAKMISEGKCG-FPRTTSALREVPGIGNYTAGAIASIAFKEAVPVVDGN 740

Query: 626  VIRVLARLKTISANPKASATIKTFWKLAGQLVDSRRPGDFNQALMELGATICTPSSPGCS 805
            V+RV+ARLK IS+NPK SATIK  W+LAGQLVD  +PGDFNQALMELGATICTP  P CS
Sbjct: 741  VVRVIARLKAISSNPKHSATIKNIWRLAGQLVDPCKPGDFNQALMELGATICTPLKPICS 800

Query: 806  VCPISGQCRAFSLSKGHNSVTVTGYPTRVPKTKQRLEFCAVCVVEILDDQRPDTPRGARR 985
             CP+S QC   S+S+ H S+ VT YP +V K K+R +F AV VV+IL++Q  D  +G++ 
Sbjct: 801  ACPVSDQCSVLSMSESHRSILVTDYPVKVVKAKKRHDFSAVSVVKILEEQ--DISKGSQY 858

Query: 986  NNVFLLVKRPDEGLLAGLWEFPSVLMDGEAVLTVRKQAIDQYLKKSFKLDTKKMCTILSR 1165
            N+ FLLVKRP+EGLLAGLWEFPSVL+DGEA    R++ ID++L KSFKLDTKK C I+SR
Sbjct: 859  NSRFLLVKRPNEGLLAGLWEFPSVLLDGEADGATRRKRIDRFL-KSFKLDTKKNCRIVSR 917

Query: 1166 NHVGECMHIFSHIRLRMYVELLILRLK----------------------GGASFVYGKEE 1279
              VGEC+H+F+HI L MYVELL+L LK                      GG    Y  E+
Sbjct: 918  EDVGECVHVFTHIHLTMYVELLVLHLKGLGLLINSHSQICMSVYVSLYPGGMKISYENED 977

Query: 1280 ----AWKCVDSHSIQSIGLTSGVRKVYNMV 1357
                 W+ +DS ++ S+GLTSGVRKVYNM+
Sbjct: 978  KETMTWRWIDSEALSSMGLTSGVRKVYNMI 1007


>ref|XP_002321221.1| predicted protein [Populus trichocarpa] gi|222861994|gb|EEE99536.1|
            predicted protein [Populus trichocarpa]
          Length = 480

 Score =  516 bits (1330), Expect = e-144
 Identities = 264/412 (64%), Positives = 314/412 (76%), Gaps = 5/412 (1%)
 Frame = +2

Query: 125  VEDMEDFGKEEENVNKIRASLLSWYYQNQRVFPWRTRTTGNEN-HKDQKEGTSISKLAYG 301
            V D+ED   ++E   KIRASLL WY  NQR  PWR  T   E   K+++E     + AYG
Sbjct: 34   VADIEDLFSDKET-QKIRASLLEWYDHNQRDLPWRRITQTKETPFKEEEEEEEEERRAYG 92

Query: 302  VWVSEMMLQQTRVTTVIDYYNRWMQKWPTIHHLACASQEEVNEMWAGLGYYRRARFLLEG 481
            VWVSE+MLQQTRV TVIDYYNRWM KWPT+HHLA AS EEVNEMWAGLGYYRRARFLLEG
Sbjct: 93   VWVSEVMLQQTRVQTVIDYYNRWMLKWPTLHHLAQASLEEVNEMWAGLGYYRRARFLLEG 152

Query: 482  AKMVVEGLGSEFPTTVSALRKVPGIGEYTAGAIASIAFNQAVPVVDGNVIRVLARLKTIS 661
            AKM+V G G  FP  VS+LRKVPGIG+YTAGAIASIAF + VPVVDGNVIRVLARLK IS
Sbjct: 153  AKMIVAG-GDGFPKIVSSLRKVPGIGDYTAGAIASIAFKEVVPVVDGNVIRVLARLKAIS 211

Query: 662  ANPKASATIKTFWKLAGQLVDSRRPGDFNQALMELGATICTPSSPGCSVCPISGQCRAFS 841
            ANPK   T+K FWKLA QLVD  RPGDFNQ+LMELGAT+CTP +P CS CP+SGQCRA +
Sbjct: 212  ANPKDKVTVKKFWKLAAQLVDPHRPGDFNQSLMELGATLCTPVNPSCSSCPVSGQCRALT 271

Query: 842  LSKGHNSVTVTGYPTRVPKTKQRLEFCAVCVVEILDDQRPDTPRGARRNNVFLLVKRPDE 1021
            +SK    V +T YP +  K KQR EF AVC VEI    R D   G + ++VFLLVKRPDE
Sbjct: 272  ISKLDKLVLITDYPAKSIKLKQRHEFSAVCAVEITG--RQDLIEGDQSSSVFLLVKRPDE 329

Query: 1022 GLLAGLWEFPSVLMDGEAVLTVRKQAIDQYLKKSFKLDTKKMCTILSRNHVGECMHIFSH 1201
            GLLAGLWEFPSV++  EA +T R++ ++++LKKSF+LD +K C++L R  +GE +HIF+H
Sbjct: 330  GLLAGLWEFPSVMLGKEADMTRRRKEMNRFLKKSFRLDPQKTCSVLLREDIGEFIHIFTH 389

Query: 1202 IRLRMYVELLILRLKGGASFVYGKEE----AWKCVDSHSIQSIGLTSGVRKV 1345
            IRL++YVELLI+ LKG  S ++ K+      WKCVD  ++ S+GLTSGVRKV
Sbjct: 390  IRLKVYVELLIVHLKGDMSDLFSKQSRENMTWKCVDREALSSLGLTSGVRKV 441


>ref|XP_002524570.1| A/G-specific adenine glycosylase muty, putative [Ricinus communis]
            gi|223536123|gb|EEF37778.1| A/G-specific adenine
            glycosylase muty, putative [Ricinus communis]
          Length = 775

 Score =  503 bits (1294), Expect = e-140
 Identities = 255/411 (62%), Positives = 311/411 (75%), Gaps = 4/411 (0%)
 Frame = +2

Query: 125  VEDMEDFGKEEENVNKIRASLLSWYYQNQRVFPWRTRTTGNENHKDQKEGTSISKLAYGV 304
            V D+ED   ++E   KIR SLL WY QNQR  PWR + T N + + ++E     K AYG+
Sbjct: 24   VVDIEDIFIDKET-QKIRESLLEWYDQNQRQLPWRRQKTTNPSQESEEEK---EKRAYGI 79

Query: 305  WVSEMMLQQTRVTTVIDYYNRWMQKWPTIHHLACASQEEVNEMWAGLGYYRRARFLLEGA 484
            WVSE+MLQQTRV TVIDYYNRWM KWPTIHHLA AS EEVNE+WAGLGYYRRARFLLEGA
Sbjct: 80   WVSEVMLQQTRVQTVIDYYNRWMLKWPTIHHLAQASLEEVNEIWAGLGYYRRARFLLEGA 139

Query: 485  KMVVEGLGSEFPTTVSALRKVPGIGEYTAGAIASIAFNQAVPVVDGNVIRVLARLKTISA 664
            KM+V G G  FP TVS+LRKVPGIG+YTAGAIASIAF + VPVVDGNV+RVL RL+ ISA
Sbjct: 140  KMIVAGGG--FPNTVSSLRKVPGIGDYTAGAIASIAFKEVVPVVDGNVVRVLTRLRAISA 197

Query: 665  NPKASATIKTFWKLAGQLVDSRRPGDFNQALMELGATICTPSSPGCSVCPISGQCRAFSL 844
            NPK S T+K  WKLA QLVD  RPGDFNQ+LMELGAT+C PS+P CS CP+S QCR  S+
Sbjct: 198  NPKDSMTVKKLWKLAAQLVDPCRPGDFNQSLMELGATVCAPSNPSCSSCPVSSQCRVLSI 257

Query: 845  SKGHNSVTVTGYPTRVPKTKQRLEFCAVCVVEILDDQRPDTPRGARRNNVFLLVKRPDEG 1024
            S    S+ VT YPT+V K K + EF AVCVVEIL    P      + ++ FLLVKRPD+G
Sbjct: 258  SNQDKSILVTDYPTKVVKVKPKHEFSAVCVVEILGSCGP--VDNQKTDSKFLLVKRPDDG 315

Query: 1025 LLAGLWEFPSVLMDGEAVLTVRKQAIDQYLKKSFKLDTKKMCTILSRNHVGECMHIFSHI 1204
            LLAGLWEFP+  +D EA L  R+  ID ++KKSF+LD +K  +++ R  +GE +HIF+HI
Sbjct: 316  LLAGLWEFPTCRLDKEADLITRRNEIDHFMKKSFRLDPEKTYSMVLREDIGEFVHIFTHI 375

Query: 1205 RLRMYVELLILRLKGGASFVYGKEEA----WKCVDSHSIQSIGLTSGVRKV 1345
            RL++YV+LL++RLKGG S ++ K+E     WKCV+  ++ ++GLTSGVRKV
Sbjct: 376  RLKVYVDLLVIRLKGGMSQLFRKQEKEATNWKCVEKKALPNLGLTSGVRKV 426


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