BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025809
         (1129 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15412.3| unnamed protein product [Vitis vinifera]              511   e-142
ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [...   509   e-142
ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicu...   497   e-138
ref|XP_002317931.1| predicted protein [Populus trichocarpa] gi|2...   492   e-137
ref|XP_003549805.1| PREDICTED: DNA mismatch repair protein Msh2-...   489   e-136

>emb|CBI15412.3| unnamed protein product [Vitis vinifera]
          Length = 945

 Score =  511 bits (1316), Expect = e-142
 Identities = 256/330 (77%), Positives = 283/330 (85%)
 Frame = -2

Query: 990 MEGNLEEQNKLPELKLDAKQAQGFISFFKTLPKDPRAVRLFDRRDYYTAHGENATFIAKT 811
           M+ + ++ +KLPELKLDAKQAQGF+SFFKTLP+DPRAVR FDRRDYYTAHGENATFIAKT
Sbjct: 1   MDQDSQDHSKLPELKLDAKQAQGFLSFFKTLPRDPRAVRFFDRRDYYTAHGENATFIAKT 60

Query: 810 YYHTTTALRQLXXXXXXXXXXXXSKNMFETIARDLLLERTDHTLELYEGSGSNWRLSKSG 631
           YYHTTTALRQL            SKNMFETIAR+LLLERTDHTLELYEGSGSNWRL KSG
Sbjct: 61  YYHTTTALRQLGSGSDGISSVSVSKNMFETIARNLLLERTDHTLELYEGSGSNWRLVKSG 120

Query: 630 TPGNLGSFEDILFANNEMQDSPVVVALCPLFRENECTIGMGFLDLTKRVVGLAEFLDDSQ 451
           TPGNLGSFED+LFANNEMQDSPV+VAL P FREN CT+G+GF+DLT+RV+GLAEFLDDSQ
Sbjct: 121 TPGNLGSFEDVLFANNEMQDSPVIVALFPNFRENGCTVGLGFVDLTRRVLGLAEFLDDSQ 180

Query: 450 FTNVESTLVALGCKECLVPLESGKSVESKNLQEALSRCGVLVTERKKTEFKSRDLVQDLS 271
           FTNVES LVALGC+ECL+P ES KS E++ L +ALSRCGV++TERK+TEFK+RDLVQDL 
Sbjct: 181 FTNVESALVALGCRECLLPSESAKSSETRTLHDALSRCGVMLTERKRTEFKARDLVQDLG 240

Query: 270 RLVKGSIEPVRDLVSNMXXXXXXXXXXXXXXXXXADERNYGNYTIQRYNLDSYMRLDSAA 91
           RLVKGSIEPVRDLVS                   ADE NYGN+TIQRYNLDSYMRLDSAA
Sbjct: 241 RLVKGSIEPVRDLVSGFELAPGALGLLLSYAELLADESNYGNFTIQRYNLDSYMRLDSAA 300

Query: 90  MRALNVLESKTDANKNFSIFGLMNRTCTAG 1
           +RALNVLESKTDANKNFS+FGLMNRTCTAG
Sbjct: 301 VRALNVLESKTDANKNFSLFGLMNRTCTAG 330


>ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [Ricinus communis]
           gi|223549157|gb|EEF50646.1| DNA mismatch repair protein
           MSH2, putative [Ricinus communis]
          Length = 936

 Score =  509 bits (1310), Expect = e-142
 Identities = 252/326 (77%), Positives = 279/326 (85%)
 Frame = -2

Query: 978 LEEQNKLPELKLDAKQAQGFISFFKTLPKDPRAVRLFDRRDYYTAHGENATFIAKTYYHT 799
           ++E NKLPELKLDAKQAQGF+SFFKTLP DPRAVR+FDRRDYYT+HGENATFIAKTYYHT
Sbjct: 1   MDEDNKLPELKLDAKQAQGFLSFFKTLPHDPRAVRVFDRRDYYTSHGENATFIAKTYYHT 60

Query: 798 TTALRQLXXXXXXXXXXXXSKNMFETIARDLLLERTDHTLELYEGSGSNWRLSKSGTPGN 619
           TTALRQL            SKNMFETIARDLLLERTDHTLELYEGSGSNWRL KSGTPGN
Sbjct: 61  TTALRQLGSGPDGLSSVSISKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGN 120

Query: 618 LGSFEDILFANNEMQDSPVVVALCPLFRENECTIGMGFLDLTKRVVGLAEFLDDSQFTNV 439
           LGSFED+LFANNEMQDSP V A+ P FREN C+IG+G++DLTKR++GLAEFLDDS FTN+
Sbjct: 121 LGSFEDVLFANNEMQDSPAVAAVIPNFRENGCSIGLGYVDLTKRILGLAEFLDDSHFTNL 180

Query: 438 ESTLVALGCKECLVPLESGKSVESKNLQEALSRCGVLVTERKKTEFKSRDLVQDLSRLVK 259
           ES LVALGCKECL+P+ESGKS+E + L +AL+RCGV++TERKK EFK+RDLV+DL RLVK
Sbjct: 181 ESALVALGCKECLLPIESGKSIECRTLHDALTRCGVMLTERKKNEFKTRDLVEDLGRLVK 240

Query: 258 GSIEPVRDLVSNMXXXXXXXXXXXXXXXXXADERNYGNYTIQRYNLDSYMRLDSAAMRAL 79
           GSIEPVRDLVS                   ADE NYGNYTI++YNLDSYMRLDSAAMRAL
Sbjct: 241 GSIEPVRDLVSGFEFAPGALGALLSYAELLADESNYGNYTIRKYNLDSYMRLDSAAMRAL 300

Query: 78  NVLESKTDANKNFSIFGLMNRTCTAG 1
           NVLESKTDANKNFS+FGLMNRTCTAG
Sbjct: 301 NVLESKTDANKNFSLFGLMNRTCTAG 326


>ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicum]
           gi|296034481|gb|ADG85112.1| mismatch repair protein
           [Solanum lycopersicum]
          Length = 943

 Score =  497 bits (1279), Expect = e-138
 Identities = 246/330 (74%), Positives = 279/330 (84%)
 Frame = -2

Query: 990 MEGNLEEQNKLPELKLDAKQAQGFISFFKTLPKDPRAVRLFDRRDYYTAHGENATFIAKT 811
           M+ N E+Q KLPELKLDA+QAQGF+SFFKTLPKD RAVRLFDRRDYYTAHG++ATFIAKT
Sbjct: 1   MDENFEKQGKLPELKLDARQAQGFLSFFKTLPKDVRAVRLFDRRDYYTAHGDDATFIAKT 60

Query: 810 YYHTTTALRQLXXXXXXXXXXXXSKNMFETIARDLLLERTDHTLELYEGSGSNWRLSKSG 631
           YYHTTTALRQL            S+NMFETIARD+LLER D TLELYEGSGSNW+L KSG
Sbjct: 61  YYHTTTALRQLGNGVGALSSVSVSRNMFETIARDILLERMDRTLELYEGSGSNWKLVKSG 120

Query: 630 TPGNLGSFEDILFANNEMQDSPVVVALCPLFRENECTIGMGFLDLTKRVVGLAEFLDDSQ 451
           TPGN GSFEDILFANNEMQDSPV+VAL P F +N CT+G+G++D+TKRV+GLAEFLDDS 
Sbjct: 121 TPGNFGSFEDILFANNEMQDSPVIVALAPKFDQNGCTVGLGYVDITKRVLGLAEFLDDSH 180

Query: 450 FTNVESTLVALGCKECLVPLESGKSVESKNLQEALSRCGVLVTERKKTEFKSRDLVQDLS 271
           FTN+ES LVALGC+ECLVP E+GKS ES+ L +A+SRCGV+VTERKKTEFK RDLVQDL 
Sbjct: 181 FTNLESALVALGCRECLVPTETGKSSESRPLYDAISRCGVMVTERKKTEFKGRDLVQDLG 240

Query: 270 RLVKGSIEPVRDLVSNMXXXXXXXXXXXXXXXXXADERNYGNYTIQRYNLDSYMRLDSAA 91
           RLVKGS+EPVRDLVS+                  AD+ NYGNYT+++YNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDLVSSFECAAGALGCILSYAELLADDSNYGNYTVKQYNLDSYMRLDSAA 300

Query: 90  MRALNVLESKTDANKNFSIFGLMNRTCTAG 1
           MRALNV+ESK+DANKNFS+FGLMNRTCTAG
Sbjct: 301 MRALNVMESKSDANKNFSLFGLMNRTCTAG 330


>ref|XP_002317931.1| predicted protein [Populus trichocarpa] gi|222858604|gb|EEE96151.1|
           predicted protein [Populus trichocarpa]
          Length = 944

 Score =  492 bits (1267), Expect = e-137
 Identities = 247/327 (75%), Positives = 271/327 (82%)
 Frame = -2

Query: 981 NLEEQNKLPELKLDAKQAQGFISFFKTLPKDPRAVRLFDRRDYYTAHGENATFIAKTYYH 802
           N EEQNKLPELKLDAKQAQGF+SFFKTLP DPRAVR+FDRRDYYT H ENATFIAKTYYH
Sbjct: 6   NFEEQNKLPELKLDAKQAQGFLSFFKTLPHDPRAVRVFDRRDYYTVHAENATFIAKTYYH 65

Query: 801 TTTALRQLXXXXXXXXXXXXSKNMFETIARDLLLERTDHTLELYEGSGSNWRLSKSGTPG 622
           TTTALRQL            SKNMFETIARDLLLERTDHTLELYEGSGSNW+L KSGTPG
Sbjct: 66  TTTALRQLGSGSNGLSSVSISKNMFETIARDLLLERTDHTLELYEGSGSNWKLVKSGTPG 125

Query: 621 NLGSFEDILFANNEMQDSPVVVALCPLFRENECTIGMGFLDLTKRVVGLAEFLDDSQFTN 442
           NLGSFED+LFANN+MQDSPVVVAL   FRE  CT+G+ ++DLTKRV+GLAEFLDDS FTN
Sbjct: 126 NLGSFEDVLFANNDMQDSPVVVALLLNFREKGCTVGLSYVDLTKRVLGLAEFLDDSHFTN 185

Query: 441 VESTLVALGCKECLVPLESGKSVESKNLQEALSRCGVLVTERKKTEFKSRDLVQDLSRLV 262
           VES LVAL CKECL+P+ESGKS + + L + L++CGV++TERKK EFK+RDLVQDL RLV
Sbjct: 186 VESALVALSCKECLLPMESGKSNDCRTLHDVLTKCGVMLTERKKNEFKTRDLVQDLGRLV 245

Query: 261 KGSIEPVRDLVSNMXXXXXXXXXXXXXXXXXADERNYGNYTIQRYNLDSYMRLDSAAMRA 82
           KG +EPVRDLVS                   ADE NYGNY I++YNLDSYMRLDSAA RA
Sbjct: 246 KGPLEPVRDLVSGFEFAPGALGALLSYAELLADESNYGNYRIRKYNLDSYMRLDSAATRA 305

Query: 81  LNVLESKTDANKNFSIFGLMNRTCTAG 1
           LNVLESKTDANKNFS+FGLMNRTCTAG
Sbjct: 306 LNVLESKTDANKNFSLFGLMNRTCTAG 332


>ref|XP_003549805.1| PREDICTED: DNA mismatch repair protein Msh2-like [Glycine max]
          Length = 942

 Score =  489 bits (1259), Expect = e-136
 Identities = 244/322 (75%), Positives = 272/322 (84%)
 Frame = -2

Query: 966 NKLPELKLDAKQAQGFISFFKTLPKDPRAVRLFDRRDYYTAHGENATFIAKTYYHTTTAL 787
           NKLPELKLD+KQAQGF+SFFKTLP DPRAVR FDRRDYYTAHGENATFIAKTYYHTTTA+
Sbjct: 10  NKLPELKLDSKQAQGFLSFFKTLPDDPRAVRFFDRRDYYTAHGENATFIAKTYYHTTTAM 69

Query: 786 RQLXXXXXXXXXXXXSKNMFETIARDLLLERTDHTLELYEGSGSNWRLSKSGTPGNLGSF 607
           RQL            S+NMFETIARDLLLERTDHTLELYEGSGSNWRL KSGTPGN+GSF
Sbjct: 70  RQLGSGSNALSSVSVSRNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNIGSF 129

Query: 606 EDILFANNEMQDSPVVVALCPLFRENECTIGMGFLDLTKRVVGLAEFLDDSQFTNVESTL 427
           ED+LFAN+EMQDSPVVVAL   +REN CTIG+GF+DLTKRV+G+AEFLDDS FTNVES  
Sbjct: 130 EDVLFANSEMQDSPVVVALSLNYRENGCTIGLGFVDLTKRVLGMAEFLDDSHFTNVESAF 189

Query: 426 VALGCKECLVPLESGKSVESKNLQEALSRCGVLVTERKKTEFKSRDLVQDLSRLVKGSIE 247
           VALGCKEC++P+ESGKS E++ L + L++CGV++TE+KK+EFK+RDLVQDL RLVKG IE
Sbjct: 190 VALGCKECILPIESGKSTENRMLCDVLTKCGVMLTEKKKSEFKTRDLVQDLGRLVKGPIE 249

Query: 246 PVRDLVSNMXXXXXXXXXXXXXXXXXADERNYGNYTIQRYNLDSYMRLDSAAMRALNVLE 67
           PVRDLVS                   ADE NY NYT++ YNLDSYMRLDSAAMRALNVLE
Sbjct: 250 PVRDLVSGFEFAPGALGALLSYAELLADESNYENYTLRSYNLDSYMRLDSAAMRALNVLE 309

Query: 66  SKTDANKNFSIFGLMNRTCTAG 1
           SKTDANKNFS+FGLMNRTCTAG
Sbjct: 310 SKTDANKNFSLFGLMNRTCTAG 331