BLASTX nr result

ID: Coptis23_contig00025807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025807
         (178 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522312.1| nucleotide binding protein, putative [Ricinu...    75   4e-12
ref|XP_003635289.1| PREDICTED: uncharacterized protein LOC100263...    72   4e-11
ref|XP_003557255.1| PREDICTED: uncharacterized protein LOC100842...    72   4e-11
ref|XP_003557254.1| PREDICTED: uncharacterized protein LOC100842...    72   4e-11
emb|CBI29396.3| unnamed protein product [Vitis vinifera]               72   4e-11

>ref|XP_002522312.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223538390|gb|EEF39996.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 1594

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/41 (85%), Positives = 38/41 (92%)
 Frame = -2

Query: 123 EVGSQPITSIAWIPTLRLLITFSKDGTLQVWKTRVINNSNR 1
           +VGSQPITSIAW+PTLRLL+T SKDGTLQVWKTRVI N NR
Sbjct: 243 QVGSQPITSIAWLPTLRLLVTVSKDGTLQVWKTRVILNPNR 283


>ref|XP_003635289.1| PREDICTED: uncharacterized protein LOC100263199, partial [Vitis
           vinifera]
          Length = 937

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 32/41 (78%), Positives = 37/41 (90%)
 Frame = -2

Query: 123 EVGSQPITSIAWIPTLRLLITFSKDGTLQVWKTRVINNSNR 1
           +VGSQPITS+AW+P LRLL+T SKDGTLQVWKTRV+ N NR
Sbjct: 318 QVGSQPITSVAWLPVLRLLVTLSKDGTLQVWKTRVMLNPNR 358


>ref|XP_003557255.1| PREDICTED: uncharacterized protein LOC100842166 isoform 2
           [Brachypodium distachyon]
          Length = 1624

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 31/41 (75%), Positives = 38/41 (92%)
 Frame = -2

Query: 123 EVGSQPITSIAWIPTLRLLITFSKDGTLQVWKTRVINNSNR 1
           + GSQPITS++W+PTL+LL+T SKDGTLQVWKTRVI N+NR
Sbjct: 250 QAGSQPITSVSWLPTLKLLVTISKDGTLQVWKTRVIINANR 290


>ref|XP_003557254.1| PREDICTED: uncharacterized protein LOC100842166 isoform 1
           [Brachypodium distachyon]
          Length = 1597

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 31/41 (75%), Positives = 38/41 (92%)
 Frame = -2

Query: 123 EVGSQPITSIAWIPTLRLLITFSKDGTLQVWKTRVINNSNR 1
           + GSQPITS++W+PTL+LL+T SKDGTLQVWKTRVI N+NR
Sbjct: 250 QAGSQPITSVSWLPTLKLLVTISKDGTLQVWKTRVIINANR 290


>emb|CBI29396.3| unnamed protein product [Vitis vinifera]
          Length = 717

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 32/41 (78%), Positives = 37/41 (90%)
 Frame = -2

Query: 123 EVGSQPITSIAWIPTLRLLITFSKDGTLQVWKTRVINNSNR 1
           +VGSQPITS+AW+P LRLL+T SKDGTLQVWKTRV+ N NR
Sbjct: 241 QVGSQPITSVAWLPVLRLLVTLSKDGTLQVWKTRVMLNPNR 281


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