BLASTX nr result

ID: Coptis23_contig00025806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025806
         (853 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265135.1| PREDICTED: probable F-actin-capping protein ...   436   e-120
emb|CAN65826.1| hypothetical protein VITISV_027402 [Vitis vinifera]   434   e-119
ref|XP_003556177.1| PREDICTED: LOW QUALITY PROTEIN: probable F-a...   429   e-118
gb|AFK48478.1| unknown [Lotus japonicus]                              428   e-118
gb|AFK38122.1| unknown [Medicago truncatula]                          427   e-117

>ref|XP_002265135.1| PREDICTED: probable F-actin-capping protein subunit beta [Vitis
           vinifera] gi|297739352|emb|CBI29342.3| unnamed protein
           product [Vitis vinifera]
          Length = 256

 Score =  436 bits (1120), Expect = e-120
 Identities = 208/253 (82%), Positives = 225/253 (88%)
 Frame = -3

Query: 851 AMGLMRRIHPKHTETXXXXXXXXXXXXXXXXXSQVDQPLQVLCDMDIGKEFILCEYNRDA 672
           A+GLMRRIHPKH+ET                 SQVDQPLQVLCD+D GKEFILCEYNRDA
Sbjct: 4   ALGLMRRIHPKHSETALSALLGLLPHLSSDLLSQVDQPLQVLCDVDSGKEFILCEYNRDA 63

Query: 671 DSYRSPWSNKYHPPLEDGQLPSPELRKLEIEANDVFAIYRDQYYEGGISSVYMWEDENEG 492
           DSYRSPWSNKYHPPLEDG  PS ELRKLEIEAN+VF+IYRDQYYEGGISSVYMWEDENEG
Sbjct: 64  DSYRSPWSNKYHPPLEDGPYPSSELRKLEIEANEVFSIYRDQYYEGGISSVYMWEDENEG 123

Query: 491 FVACFLIKKDGSKSGQGRRGYLEEGSWDAIHVIQVGPEEEGIAHYCLTSTVMLSLTTQDE 312
           FV CFLIKKDGSK+G GRRGYL+EGSWDAIHVI+VGP+EEGI HYCLTSTVMLSLTT D+
Sbjct: 124 FVGCFLIKKDGSKTGHGRRGYLQEGSWDAIHVIEVGPDEEGITHYCLTSTVMLSLTTNDQ 183

Query: 311 SSGTFSLSGSIRRQMNMDLAVVEGHLCNMGRMIEEMESKLRNSLDQVYFGKTREMVCTLR 132
           SSGTFSLSGSIRRQMNMDL++ +GHLCNMG+MIEEMESKLRNSLDQVYFGKT+EMVCTLR
Sbjct: 184 SSGTFSLSGSIRRQMNMDLSIADGHLCNMGKMIEEMESKLRNSLDQVYFGKTKEMVCTLR 243

Query: 131 PPAEVAQLRLPDS 93
           PPAEV  +RLP+S
Sbjct: 244 PPAEVLPMRLPES 256


>emb|CAN65826.1| hypothetical protein VITISV_027402 [Vitis vinifera]
          Length = 256

 Score =  434 bits (1116), Expect = e-119
 Identities = 208/253 (82%), Positives = 224/253 (88%)
 Frame = -3

Query: 851 AMGLMRRIHPKHTETXXXXXXXXXXXXXXXXXSQVDQPLQVLCDMDIGKEFILCEYNRDA 672
           A+GLMRRIHPKH+ET                 SQVDQPLQVLCD+D GKEFILCEYNRDA
Sbjct: 4   ALGLMRRIHPKHSETALSALLGLLPHLSSDLLSQVDQPLQVLCDVDSGKEFILCEYNRDA 63

Query: 671 DSYRSPWSNKYHPPLEDGQLPSPELRKLEIEANDVFAIYRDQYYEGGISSVYMWEDENEG 492
           DSYRSPWSNKYHPPLEDG  PS ELRKLEIEAN+VF+IYRDQYYEGGISSVYMWEDENEG
Sbjct: 64  DSYRSPWSNKYHPPLEDGPYPSSELRKLEIEANEVFSIYRDQYYEGGISSVYMWEDENEG 123

Query: 491 FVACFLIKKDGSKSGQGRRGYLEEGSWDAIHVIQVGPEEEGIAHYCLTSTVMLSLTTQDE 312
           FV CFLIKKDGSK+G GRRGYL+EGSWDAIHVI+VGP+EEGI HYCLTSTVMLSLTT D+
Sbjct: 124 FVXCFLIKKDGSKTGHGRRGYLQEGSWDAIHVIEVGPDEEGITHYCLTSTVMLSLTTNDQ 183

Query: 311 SSGTFSLSGSIRRQMNMDLAVVEGHLCNMGRMIEEMESKLRNSLDQVYFGKTREMVCTLR 132
           SSGTFSLSGSIRRQMNMDL++ +GHLCNMG+MIEEMESKLRNSLDQVYFGKT+EMVCTLR
Sbjct: 184 SSGTFSLSGSIRRQMNMDLSIADGHLCNMGKMIEEMESKLRNSLDQVYFGKTKEMVCTLR 243

Query: 131 PPAEVAQLRLPDS 93
           PPAEV  +RLP S
Sbjct: 244 PPAEVLPMRLPXS 256


>ref|XP_003556177.1| PREDICTED: LOW QUALITY PROTEIN: probable F-actin-capping protein
           subunit beta-like [Glycine max]
          Length = 257

 Score =  429 bits (1103), Expect = e-118
 Identities = 210/253 (83%), Positives = 225/253 (88%)
 Frame = -3

Query: 851 AMGLMRRIHPKHTETXXXXXXXXXXXXXXXXXSQVDQPLQVLCDMDIGKEFILCEYNRDA 672
           AMGLMRRI PKHTET                 SQVDQPLQVLCD++ GKEFILCEYNRDA
Sbjct: 4   AMGLMRRIPPKHTETALSALLSLMPDNSSDLLSQVDQPLQVLCDVECGKEFILCEYNRDA 63

Query: 671 DSYRSPWSNKYHPPLEDGQLPSPELRKLEIEANDVFAIYRDQYYEGGISSVYMWEDENEG 492
           DSYRSPWSNKYHPPLEDG LPS ELRKLEIEAND+FAIYRDQYYEGGISSVYMWED+NEG
Sbjct: 64  DSYRSPWSNKYHPPLEDGSLPSSELRKLEIEANDIFAIYRDQYYEGGISSVYMWEDDNEG 123

Query: 491 FVACFLIKKDGSKSGQGRRGYLEEGSWDAIHVIQVGPEEEGIAHYCLTSTVMLSLTTQDE 312
           FVACFLIKKDGSK+GQGRRGYLEEG+WDAIHVI+VGPEEE   +Y LTSTVML+LTT +E
Sbjct: 124 FVACFLIKKDGSKTGQGRRGYLEEGAWDAIHVIEVGPEEEENTNYRLTSTVMLTLTTNNE 183

Query: 311 SSGTFSLSGSIRRQMNMDLAVVEGHLCNMGRMIEEMESKLRNSLDQVYFGKTREMVCTLR 132
           SSGTFSLSGSIRRQM+M L+V +GHLCNMGRMIEEMESKLRNSLDQVYFGKTREMVCTLR
Sbjct: 184 SSGTFSLSGSIRRQMSMKLSVADGHLCNMGRMIEEMESKLRNSLDQVYFGKTREMVCTLR 243

Query: 131 PPAEVAQLRLPDS 93
           PP+EVAQLR+PDS
Sbjct: 244 PPSEVAQLRMPDS 256


>gb|AFK48478.1| unknown [Lotus japonicus]
          Length = 256

 Score =  428 bits (1100), Expect = e-118
 Identities = 209/253 (82%), Positives = 225/253 (88%)
 Frame = -3

Query: 851 AMGLMRRIHPKHTETXXXXXXXXXXXXXXXXXSQVDQPLQVLCDMDIGKEFILCEYNRDA 672
           AMGLMRRI PKHT+T                 SQVDQPLQVLCD+D GKEFILCEYNRDA
Sbjct: 4   AMGLMRRIPPKHTDTALSALLSLMPNHSSDLLSQVDQPLQVLCDVDSGKEFILCEYNRDA 63

Query: 671 DSYRSPWSNKYHPPLEDGQLPSPELRKLEIEANDVFAIYRDQYYEGGISSVYMWEDENEG 492
           DSYRSPWSNKYHPPLEDG LPS ELRKLEIEA+D+FAIYRDQYYEGGISSVYMWED+NEG
Sbjct: 64  DSYRSPWSNKYHPPLEDGSLPSAELRKLEIEASDIFAIYRDQYYEGGISSVYMWEDDNEG 123

Query: 491 FVACFLIKKDGSKSGQGRRGYLEEGSWDAIHVIQVGPEEEGIAHYCLTSTVMLSLTTQDE 312
           FVACFLIKKDGSK+GQGRRGYLEEG+WDAIHVI+VGPEEE   +Y LTSTVML+LTT +E
Sbjct: 124 FVACFLIKKDGSKTGQGRRGYLEEGAWDAIHVIEVGPEEEENTNYRLTSTVMLTLTTSNE 183

Query: 311 SSGTFSLSGSIRRQMNMDLAVVEGHLCNMGRMIEEMESKLRNSLDQVYFGKTREMVCTLR 132
           SSGTFSLSGSIRRQMNM L+V +GHLCNMGRMIEEMESKLRNSLDQVYFGKTREMVCTLR
Sbjct: 184 SSGTFSLSGSIRRQMNMKLSVADGHLCNMGRMIEEMESKLRNSLDQVYFGKTREMVCTLR 243

Query: 131 PPAEVAQLRLPDS 93
           PPAEVAQ+R+P+S
Sbjct: 244 PPAEVAQMRIPES 256


>gb|AFK38122.1| unknown [Medicago truncatula]
          Length = 256

 Score =  427 bits (1098), Expect = e-117
 Identities = 209/253 (82%), Positives = 224/253 (88%)
 Frame = -3

Query: 851 AMGLMRRIHPKHTETXXXXXXXXXXXXXXXXXSQVDQPLQVLCDMDIGKEFILCEYNRDA 672
           AMGLMRRI PKHTET                 SQVDQPLQVLCD+D GKEFILCEYNRDA
Sbjct: 4   AMGLMRRIPPKHTETALSALLSLMPNHSSDLLSQVDQPLQVLCDVDCGKEFILCEYNRDA 63

Query: 671 DSYRSPWSNKYHPPLEDGQLPSPELRKLEIEANDVFAIYRDQYYEGGISSVYMWEDENEG 492
           DSYR PWSNKYHPPLEDG LPS ELRKLEIEAND+FAIYRDQYYEGGISSVYMWEDENEG
Sbjct: 64  DSYRPPWSNKYHPPLEDGSLPSSELRKLEIEANDIFAIYRDQYYEGGISSVYMWEDENEG 123

Query: 491 FVACFLIKKDGSKSGQGRRGYLEEGSWDAIHVIQVGPEEEGIAHYCLTSTVMLSLTTQDE 312
           FVACFLIKKDGSK+GQGRRGYLEEG+WDAIHVI+VGPEEE   +Y LTSTVML+LTT +E
Sbjct: 124 FVACFLIKKDGSKTGQGRRGYLEEGAWDAIHVIEVGPEEEEDTNYRLTSTVMLTLTTNNE 183

Query: 311 SSGTFSLSGSIRRQMNMDLAVVEGHLCNMGRMIEEMESKLRNSLDQVYFGKTREMVCTLR 132
           SSGTFSLSGSIRRQM+M L+V +GHLCNMGRMIEEMESKLRNSLDQVYFGKTREMVCTLR
Sbjct: 184 SSGTFSLSGSIRRQMSMRLSVADGHLCNMGRMIEEMESKLRNSLDQVYFGKTREMVCTLR 243

Query: 131 PPAEVAQLRLPDS 93
           PP+EVAQ+R+P+S
Sbjct: 244 PPSEVAQMRMPES 256


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