BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025796
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249...   169   3e-40
ref|XP_002522264.1| replication factor C / DNA polymerase III ga...   164   1e-38
emb|CBI30725.3| unnamed protein product [Vitis vinifera]              155   5e-36
ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|2...   150   2e-34
ref|XP_004155535.1| PREDICTED: uncharacterized protein LOC101226...   147   1e-33

>ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249702 [Vitis vinifera]
          Length = 1161

 Score =  169 bits (429), Expect = 3e-40
 Identities = 91/167 (54%), Positives = 113/167 (67%)
 Frame = -2

Query: 653  LLPSGSLQISKSEIIELEASPQEPEGVKCKDNIKNLKGKGLECDWIDESTTSHQQSALGP 474
            LL + SL++ +SEI+E+  SP+E +     DN       GLE  W  E+++SH++S +  
Sbjct: 995  LLNANSLEMGRSEIVEILPSPRELKSNDHVDNNVQSDKTGLESSWAGEASSSHRKSTMAS 1054

Query: 473  SAGKRTNGEQPQSQSLVRSKVSLAHVIQQAEGCTQRNGWSRRKAISIAEKLEQENLRLEP 294
               +R  GEQ  SQSLVRSKVSLAHVIQQAEGC+QR+GW++RKA+SIAEKLEQENLRLEP
Sbjct: 1055 VPERRKFGEQSHSQSLVRSKVSLAHVIQQAEGCSQRSGWTKRKAVSIAEKLEQENLRLEP 1114

Query: 293  RSRSLLCWKASRVTXXXXXXXXXXXXXXXXXLKLFPCVRCLPVKSPR 153
            RSRSLLCWKAS+VT                 LKL  C +CL  KSPR
Sbjct: 1115 RSRSLLCWKASKVTRRKLSRFKIRTRRPHSLLKLVSCGKCLSSKSPR 1161


>ref|XP_002522264.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223538517|gb|EEF40122.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 1105

 Score =  164 bits (416), Expect = 1e-38
 Identities = 93/167 (55%), Positives = 113/167 (67%), Gaps = 1/167 (0%)
 Frame = -2

Query: 650  LPSG-SLQISKSEIIELEASPQEPEGVKCKDNIKNLKGKGLECDWIDESTTSHQQSALGP 474
            LP+G SL + +SEI+E+ ASP+E +G    DN      + L+     ES  SH+ S++G 
Sbjct: 940  LPAGESLDVGRSEIVEIPASPREIKGSGHADNDAESSKRALQRARAGESV-SHKNSSIGS 998

Query: 473  SAGKRTNGEQPQSQSLVRSKVSLAHVIQQAEGCTQRNGWSRRKAISIAEKLEQENLRLEP 294
             + +R  GE  QS+SLVRSKVSLAHVIQQAEGCTQ+ GWS+RKA+SIAEKLEQENLRLEP
Sbjct: 999  MSERRKLGEPSQSKSLVRSKVSLAHVIQQAEGCTQQTGWSKRKAVSIAEKLEQENLRLEP 1058

Query: 293  RSRSLLCWKASRVTXXXXXXXXXXXXXXXXXLKLFPCVRCLPVKSPR 153
            RSRSLLCWKASRVT                 LKL  C +C+  KSPR
Sbjct: 1059 RSRSLLCWKASRVTRRKLSRLKIRTRKPHALLKLVSCGKCISSKSPR 1105


>emb|CBI30725.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  155 bits (393), Expect = 5e-36
 Identities = 86/167 (51%), Positives = 107/167 (64%)
 Frame = -2

Query: 653  LLPSGSLQISKSEIIELEASPQEPEGVKCKDNIKNLKGKGLECDWIDESTTSHQQSALGP 474
            LL + SL++ +SEI+E+  SP+E                     W  E+++SH++S +  
Sbjct: 771  LLNANSLEMGRSEIVEILPSPRELNS------------------WAGEASSSHRKSTMAS 812

Query: 473  SAGKRTNGEQPQSQSLVRSKVSLAHVIQQAEGCTQRNGWSRRKAISIAEKLEQENLRLEP 294
               +R  GEQ  SQSLVRSKVSLAHVIQQAEGC+QR+GW++RKA+SIAEKLEQENLRLEP
Sbjct: 813  VPERRKFGEQSHSQSLVRSKVSLAHVIQQAEGCSQRSGWTKRKAVSIAEKLEQENLRLEP 872

Query: 293  RSRSLLCWKASRVTXXXXXXXXXXXXXXXXXLKLFPCVRCLPVKSPR 153
            RSRSLLCWKAS+VT                 LKL  C +CL  KSPR
Sbjct: 873  RSRSLLCWKASKVTRRKLSRFKIRTRRPHSLLKLVSCGKCLSSKSPR 919


>ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|222860456|gb|EEE98003.1|
            predicted protein [Populus trichocarpa]
          Length = 1190

 Score =  150 bits (379), Expect = 2e-34
 Identities = 83/157 (52%), Positives = 105/157 (66%)
 Frame = -2

Query: 623  KSEIIELEASPQEPEGVKCKDNIKNLKGKGLECDWIDESTTSHQQSALGPSAGKRTNGEQ 444
            +SEI+E+ ASP++ EG +  ++      +GL+  W  ES  S+++ A+G    +R  GE 
Sbjct: 1035 RSEIVEIPASPRKYEGNEPANHNVESSRRGLQRTWAGESV-SNKKPAMGSMVERRILGEP 1093

Query: 443  PQSQSLVRSKVSLAHVIQQAEGCTQRNGWSRRKAISIAEKLEQENLRLEPRSRSLLCWKA 264
             QS+S+VRSKVSLAHVIQQAEGCTQ+  WS+ KA+SIAEKLEQENLRLEPRSRSLLCWKA
Sbjct: 1094 SQSKSIVRSKVSLAHVIQQAEGCTQQAEWSKHKAVSIAEKLEQENLRLEPRSRSLLCWKA 1153

Query: 263  SRVTXXXXXXXXXXXXXXXXXLKLFPCVRCLPVKSPR 153
            +RVT                 LKL  C +CL  K PR
Sbjct: 1154 TRVTRRKLSRMKIRTRKPRSLLKLVSCGKCLSSKPPR 1190


>ref|XP_004155535.1| PREDICTED: uncharacterized protein LOC101226355 [Cucumis sativus]
          Length = 1120

 Score =  147 bits (372), Expect = 1e-33
 Identities = 83/165 (50%), Positives = 107/165 (64%)
 Frame = -2

Query: 665  THANLLPSGSLQISKSEIIELEASPQEPEGVKCKDNIKNLKGKGLECDWIDESTTSHQQS 486
            + A L   GS ++ + EI+E++ASP+E    + + N +NL+G         E + S + S
Sbjct: 961  SQAQLTHYGSGEVGRGEIVEIDASPREANNQR-EPNQRNLEGSQ------GEVSVSRKNS 1013

Query: 485  ALGPSAGKRTNGEQPQSQSLVRSKVSLAHVIQQAEGCTQRNGWSRRKAISIAEKLEQENL 306
             +   + +R  G Q +SQS+VRSKVSLAHVIQQAEGC+QR+GWS RKA+SIAEKLEQENL
Sbjct: 1014 TMSSISERREAGAQSRSQSIVRSKVSLAHVIQQAEGCSQRSGWSTRKAVSIAEKLEQENL 1073

Query: 305  RLEPRSRSLLCWKASRVTXXXXXXXXXXXXXXXXXLKLFPCVRCL 171
            RLEP+SRSLLCWKASRVT                 LKL  C +CL
Sbjct: 1074 RLEPQSRSLLCWKASRVTRRKLSRLKVRTRRPQSLLKLVSCGKCL 1118