BLASTX nr result

ID: Coptis23_contig00025795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025795
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276934.1| PREDICTED: uncharacterized protein LOC100263...    66   3e-09
ref|XP_002519203.1| protein translocase, putative [Ricinus commu...    66   3e-09
ref|XP_003609756.1| hypothetical protein MTR_4g121900 [Medicago ...    65   6e-09
ref|XP_002314929.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_003533195.1| PREDICTED: uncharacterized protein LOC100800...    64   1e-08

>ref|XP_002276934.1| PREDICTED: uncharacterized protein LOC100263757 [Vitis vinifera]
           gi|296083265|emb|CBI22901.3| unnamed protein product
           [Vitis vinifera]
          Length = 177

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/51 (66%), Positives = 38/51 (74%)
 Frame = -1

Query: 208 AHDWKNSTVXXXXXXXXXXXTSDCSSHEQIVQCAITGAAISTAANMLSGIF 56
           AHDWKNS V           TS+ +SHEQIVQCAITGAAISTAAN+L+GIF
Sbjct: 127 AHDWKNSAVAGAVTGVALALTSNDTSHEQIVQCAITGAAISTAANLLTGIF 177


>ref|XP_002519203.1| protein translocase, putative [Ricinus communis]
           gi|223541518|gb|EEF43067.1| protein translocase,
           putative [Ricinus communis]
          Length = 181

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/51 (66%), Positives = 37/51 (72%)
 Frame = -1

Query: 208 AHDWKNSTVXXXXXXXXXXXTSDCSSHEQIVQCAITGAAISTAANMLSGIF 56
           AHDWKNS V           T+D  SHEQIVQCAITGAAISTAAN+L+GIF
Sbjct: 131 AHDWKNSAVAGAVTGMALALTADDVSHEQIVQCAITGAAISTAANLLTGIF 181


>ref|XP_003609756.1| hypothetical protein MTR_4g121900 [Medicago truncatula]
           gi|355510811|gb|AES91953.1| hypothetical protein
           MTR_4g121900 [Medicago truncatula]
          Length = 194

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/50 (66%), Positives = 36/50 (72%)
 Frame = -1

Query: 205 HDWKNSTVXXXXXXXXXXXTSDCSSHEQIVQCAITGAAISTAANMLSGIF 56
           HDWKNS V           TSD +SHEQI QCAITGAAISTAAN+L+GIF
Sbjct: 145 HDWKNSAVAGAITGAALACTSDNTSHEQIAQCAITGAAISTAANLLTGIF 194


>ref|XP_002314929.1| predicted protein [Populus trichocarpa] gi|222863969|gb|EEF01100.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/50 (66%), Positives = 35/50 (70%)
 Frame = -1

Query: 205 HDWKNSTVXXXXXXXXXXXTSDCSSHEQIVQCAITGAAISTAANMLSGIF 56
           HDWKNS V           T+D  SHEQIVQCAITGAAISTAAN+L GIF
Sbjct: 130 HDWKNSAVAGAITGVALALTADDKSHEQIVQCAITGAAISTAANLLKGIF 179


>ref|XP_003533195.1| PREDICTED: uncharacterized protein LOC100800540 [Glycine max]
          Length = 181

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/51 (64%), Positives = 37/51 (72%)
 Frame = -1

Query: 208 AHDWKNSTVXXXXXXXXXXXTSDCSSHEQIVQCAITGAAISTAANMLSGIF 56
           AHDWKNS V           T + S+HEQIVQCAITGAAISTAAN+L+GIF
Sbjct: 131 AHDWKNSAVAGAITGATLALTLEDSTHEQIVQCAITGAAISTAANLLTGIF 181


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