BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025783
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531985.1| Ubiquitin ligase protein FANCL, putative [Ri...   182   2e-44
ref|XP_002310876.1| predicted protein [Populus trichocarpa] gi|2...   178   5e-43
ref|XP_002866688.1| hypothetical protein ARALYDRAFT_496810 [Arab...   175   4e-42
ref|NP_001032152.1| zinc ion binding protein [Arabidopsis thalia...   169   2e-40
dbj|BAC43383.2| unknown protein [Arabidopsis thaliana]                169   2e-40

>ref|XP_002531985.1| Ubiquitin ligase protein FANCL, putative [Ricinus communis]
           gi|223528344|gb|EEF30384.1| Ubiquitin ligase protein
           FANCL, putative [Ricinus communis]
          Length = 309

 Score =  182 bits (463), Expect = 2e-44
 Identities = 79/117 (67%), Positives = 96/117 (82%)
 Frame = +1

Query: 1   RKTWRRNSKRWKKDVPFHENLANILETSLPRPPCLQNLQHQVECGICYAQYLPVDDELGA 180
           RK W+RN K+W +D  F ENL +ILET LP+PP +Q    Q+ECGICYAQYLP+DDELG 
Sbjct: 141 RKRWQRNCKQWMQDKTFLENLLSILETELPKPPDVQKNDQQIECGICYAQYLPIDDELGP 200

Query: 181 KSGSRPDYVCDNISCSRAFHSVCLGDWLCSITTTRRSFDVLFGNCPYCSGPVAVNVN 351
           +SG+  DY CDN +C+RAFHS+CLGDWL SITTTR+S++VLFGNCPYCS PVAV +N
Sbjct: 201 RSGTGTDYTCDNSNCNRAFHSICLGDWLRSITTTRQSYNVLFGNCPYCSEPVAVKIN 257


>ref|XP_002310876.1| predicted protein [Populus trichocarpa] gi|222853779|gb|EEE91326.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  178 bits (451), Expect = 5e-43
 Identities = 82/120 (68%), Positives = 94/120 (78%)
 Frame = +1

Query: 1   RKTWRRNSKRWKKDVPFHENLANILETSLPRPPCLQNLQHQVECGICYAQYLPVDDELGA 180
           RK W RN+KRW KD    ENLA ILET LPRP  +     QVECGICYAQYLP+D+ELG+
Sbjct: 148 RKLWLRNNKRWMKDKTLPENLAFILETELPRPSHVLENDQQVECGICYAQYLPIDEELGS 207

Query: 181 KSGSRPDYVCDNISCSRAFHSVCLGDWLCSITTTRRSFDVLFGNCPYCSGPVAVNVNTKE 360
           +SG+  D+ CDN SC RAFH+VCL DWL SITTTR+SFDVLFGNCPYCS PVAV +N K+
Sbjct: 208 RSGAGTDHTCDNTSCGRAFHTVCLVDWLRSITTTRQSFDVLFGNCPYCSEPVAVKLNDKK 267


>ref|XP_002866688.1| hypothetical protein ARALYDRAFT_496810 [Arabidopsis lyrata subsp.
           lyrata] gi|297312523|gb|EFH42947.1| hypothetical protein
           ARALYDRAFT_496810 [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score =  175 bits (443), Expect = 4e-42
 Identities = 80/116 (68%), Positives = 95/116 (81%), Gaps = 2/116 (1%)
 Frame = +1

Query: 10  WRRNSKRWKKDVPFHENLANILETSLPRPPCLQNL--QHQVECGICYAQYLPVDDELGAK 183
           WRRNSK+W K+ PF ENL  IL T LP+P  LQ    Q QVECGICYAQ+LP D+ELGA+
Sbjct: 183 WRRNSKKWSKERPFPENLECILGTELPKPLGLQEEENQQQVECGICYAQFLPTDEELGAR 242

Query: 184 SGSRPDYVCDNISCSRAFHSVCLGDWLCSITTTRRSFDVLFGNCPYCSGPVAVNVN 351
           SG++ DY C+NISC+++FHS+CL DWL SITTTR+SFDVLFGNCPYCS PVAV +N
Sbjct: 243 SGTQTDYTCENISCNKSFHSLCLTDWLRSITTTRQSFDVLFGNCPYCSDPVAVKIN 298


>ref|NP_001032152.1| zinc ion binding protein [Arabidopsis thaliana]
           gi|222424329|dbj|BAH20121.1| AT5G65740 [Arabidopsis
           thaliana] gi|332010715|gb|AED98098.1| zinc ion binding
           protein [Arabidopsis thaliana]
          Length = 300

 Score =  169 bits (429), Expect = 2e-40
 Identities = 79/118 (66%), Positives = 93/118 (78%), Gaps = 2/118 (1%)
 Frame = +1

Query: 10  WRRNSKRWKKDVPFHENLANILETSLPRPPCLQ--NLQHQVECGICYAQYLPVDDELGAK 183
           WRRN KRW  +  F ENL  IL T LP+P  LQ  + Q QVECGICYAQ+LP D+ELGA+
Sbjct: 183 WRRNCKRWSNERSFPENLECILGTELPKPLGLQVEDDQQQVECGICYAQFLPTDEELGAR 242

Query: 184 SGSRPDYVCDNISCSRAFHSVCLGDWLCSITTTRRSFDVLFGNCPYCSGPVAVNVNTK 357
           SG+R DY C+NISC+++FHS+CL DWL SITTTR+SFDVLFGNCPYCS PVAV  + K
Sbjct: 243 SGTRTDYTCENISCNKSFHSLCLTDWLRSITTTRQSFDVLFGNCPYCSDPVAVKTSNK 300


>dbj|BAC43383.2| unknown protein [Arabidopsis thaliana]
          Length = 216

 Score =  169 bits (429), Expect = 2e-40
 Identities = 79/118 (66%), Positives = 93/118 (78%), Gaps = 2/118 (1%)
 Frame = +1

Query: 10  WRRNSKRWKKDVPFHENLANILETSLPRPPCLQ--NLQHQVECGICYAQYLPVDDELGAK 183
           WRRN KRW  +  F ENL  IL T LP+P  LQ  + Q QVECGICYAQ+LP D+ELGA+
Sbjct: 99  WRRNCKRWSNERSFPENLECILGTELPKPLGLQVEDDQQQVECGICYAQFLPTDEELGAR 158

Query: 184 SGSRPDYVCDNISCSRAFHSVCLGDWLCSITTTRRSFDVLFGNCPYCSGPVAVNVNTK 357
           SG+R DY C+NISC+++FHS+CL DWL SITTTR+SFDVLFGNCPYCS PVAV  + K
Sbjct: 159 SGTRTDYTCENISCNKSFHSLCLTDWLRSITTTRQSFDVLFGNCPYCSDPVAVKTSNK 216