BLASTX nr result
ID: Coptis23_contig00025779
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00025779 (898 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002322740.1| predicted protein [Populus trichocarpa] gi|2... 252 9e-65 emb|CAN68511.1| hypothetical protein VITISV_043839 [Vitis vinifera] 251 2e-64 ref|XP_003632719.1| PREDICTED: uncharacterized protein LOC100267... 249 5e-64 ref|XP_002531176.1| nucleic acid binding protein, putative [Rici... 247 3e-63 ref|XP_004163935.1| PREDICTED: uncharacterized LOC101222540 [Cuc... 199 6e-49 >ref|XP_002322740.1| predicted protein [Populus trichocarpa] gi|222867370|gb|EEF04501.1| predicted protein [Populus trichocarpa] Length = 233 Score = 252 bits (643), Expect = 9e-65 Identities = 135/247 (54%), Positives = 171/247 (69%), Gaps = 3/247 (1%) Frame = +3 Query: 90 MEKNERETHDFMNVDSFSQLPFKRPAAPVKEKGIRLFGIEFMG--EAPVTEESDSCATKV 263 M+K ERETHDFMNV+SFSQLPF RPA P+KEKGIRLFGIEF E+P +ESDS T Sbjct: 1 MDKVERETHDFMNVESFSQLPFIRPA-PIKEKGIRLFGIEFGSNKESPAADESDSAETNE 59 Query: 264 FEDSKENENAESVRKFECHYCCRTFPTSQALGGHQNAHKRERQHAKRAHLQSTLAHNSIH 443 + +KENE++++ R+FECHYCCR FPTSQALGGHQNAHKRERQHAKRAHLQS + HNS+ Sbjct: 60 -DAAKENESSDNNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMIHNSLS 118 Query: 444 DGHMYGLVNYRIGAATPTLSSYPSWXXXXXXXXXXXXXHHQFYRNQGALSQTPINGSPLS 623 D H YG++NYRI + + ++PSW +++Y QG+ SQ PINGSPL Sbjct: 119 DAHYYGILNYRIDSISTAAMTHPSWNSHTST--------NRYYGGQGSYSQQPINGSPLG 170 Query: 624 MWRMSQVQTSHGYSH-DRMLLPLSPSSSFIAGDHSRLAPIDSSNPHSRRVHEAKTNLHDP 800 +WR+ V S H DR + PL PS S G+ + +P S+ H R +E+K+++ D Sbjct: 171 LWRIPAVHGSATLQHPDRSVHPL-PSFS---GEGLKPSPAGGSSSHGRYGYESKSSVQDR 226 Query: 801 VSLDLRL 821 VSLDL L Sbjct: 227 VSLDLHL 233 >emb|CAN68511.1| hypothetical protein VITISV_043839 [Vitis vinifera] Length = 270 Score = 251 bits (641), Expect = 2e-64 Identities = 138/252 (54%), Positives = 168/252 (66%), Gaps = 3/252 (1%) Frame = +3 Query: 75 PFLPSMEK-NERETHDFMNVDSFSQLPFKRPAAPVKEKGIRLFGIEFMGEAPVTEESDSC 251 P L M+K ERETHDFMNV+SFSQLPF RPA PVKEKGIRLFG EF G E+S+S Sbjct: 28 PSLLLMDKATERETHDFMNVESFSQLPFIRPA-PVKEKGIRLFGKEFGGHHDPEEQSESV 86 Query: 252 ATKVFEDSKENENAESVRKFECHYCCRTFPTSQALGGHQNAHKRERQHAKRAHLQSTLAH 431 T + ED K++EN ES R+FECHYCCR FPTSQALGGHQNAHKRERQHAKRAHLQS + H Sbjct: 87 ETNMCEDVKDSENGESGRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVH 146 Query: 432 NSIHDGHMYGLVNYRIGAATPTLSSYPSWXXXXXXXXXXXXXHHQFYRNQGALSQTPING 611 + + D HMYGLVNYR+G+A +YPSW + +FY + G+ SQ PING Sbjct: 147 SGLSDAHMYGLVNYRLGSAPTPPITYPSW------GSQAISSNGRFYGSHGSFSQPPING 200 Query: 612 SPLSMWRM-SQVQTSHGYSHDRMLLPLSPSSSFIAGDHSRLAPIDSSNPHSRRVHEA-KT 785 +PL++WR+ + VQT+ +S DR P F D + + S SR V+E+ K Sbjct: 201 NPLALWRIPASVQTTPTFSRDRS--SHHPLPLFAGDDLKPSSHVGGSTSQSRYVYESTKP 258 Query: 786 NLHDPVSLDLRL 821 + D VSLDL L Sbjct: 259 GVQDHVSLDLHL 270 >ref|XP_003632719.1| PREDICTED: uncharacterized protein LOC100267595 [Vitis vinifera] Length = 238 Score = 249 bits (637), Expect = 5e-64 Identities = 134/242 (55%), Positives = 163/242 (67%), Gaps = 2/242 (0%) Frame = +3 Query: 102 ERETHDFMNVDSFSQLPFKRPAAPVKEKGIRLFGIEFMGEAPVTEESDSCATKVFEDSKE 281 ERETHDFMNV+SFSQLPF RPA PVKEKGIRLFG EF G E+S+S T + ED K+ Sbjct: 6 ERETHDFMNVESFSQLPFIRPA-PVKEKGIRLFGKEFGGHHDPEEQSESVETNMCEDVKD 64 Query: 282 NENAESVRKFECHYCCRTFPTSQALGGHQNAHKRERQHAKRAHLQSTLAHNSIHDGHMYG 461 +EN ES R+FECHYCCR FPTSQALGGHQNAHKRERQHAKRAHLQS + H+ + D HMYG Sbjct: 65 SENGESGRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHSGLSDAHMYG 124 Query: 462 LVNYRIGAATPTLSSYPSWXXXXXXXXXXXXXHHQFYRNQGALSQTPINGSPLSMWRM-S 638 LVNYR+G+A +YPSW + +FY + G+ SQ PING+PL++WR+ + Sbjct: 125 LVNYRLGSAPTPPITYPSW------GSQAISSNGRFYGSHGSFSQPPINGNPLALWRIPA 178 Query: 639 QVQTSHGYSHDRMLLPLSPSSSFIAGDHSRLAPIDSSNPHSRRVHEA-KTNLHDPVSLDL 815 VQT+ +S DR P F D + + S SR V+E+ K + D VSLDL Sbjct: 179 SVQTTPTFSRDRS--SHHPLPLFAGDDLKPSSHVGGSTSQSRYVYESTKPGVQDHVSLDL 236 Query: 816 RL 821 L Sbjct: 237 HL 238 >ref|XP_002531176.1| nucleic acid binding protein, putative [Ricinus communis] gi|223529246|gb|EEF31219.1| nucleic acid binding protein, putative [Ricinus communis] Length = 231 Score = 247 bits (630), Expect = 3e-63 Identities = 126/244 (51%), Positives = 160/244 (65%) Frame = +3 Query: 90 MEKNERETHDFMNVDSFSQLPFKRPAAPVKEKGIRLFGIEFMGEAPVTEESDSCATKVFE 269 M+K+ERETHDFMNV+SFSQLPF RPA PVKEK IRLFGIEF G + + A + Sbjct: 1 MDKSERETHDFMNVESFSQLPFIRPA-PVKEKSIRLFGIEFGGNDSAAGDDSASAETNED 59 Query: 270 DSKENENAESVRKFECHYCCRTFPTSQALGGHQNAHKRERQHAKRAHLQSTLAHNSIHDG 449 ++KE+E+ ++ R+FECHYCCR FPTSQALGGHQNAHKRERQHAKRAHLQS + HNS D Sbjct: 60 NTKESESGDNNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHNSFSDA 119 Query: 450 HMYGLVNYRIGAATPTLSSYPSWXXXXXXXXXXXXXHHQFYRNQGALSQTPINGSPLSMW 629 H+YG++NYRIG+ SYPSW +FY + G+ Q PINGSPL +W Sbjct: 120 HIYGMMNYRIGSNPTPAMSYPSW--------NSHANSSRFYGSHGSYPQQPINGSPLGLW 171 Query: 630 RMSQVQTSHGYSHDRMLLPLSPSSSFIAGDHSRLAPIDSSNPHSRRVHEAKTNLHDPVSL 809 R+ V +S DR + PL +G+ +L+ + S+ R +E K ++ D VSL Sbjct: 172 RIPTVHSSATLHRDRSMNPL----PLFSGEELKLSQVGGSSSQGRYGYEGKPSVQDHVSL 227 Query: 810 DLRL 821 DL L Sbjct: 228 DLHL 231 >ref|XP_004163935.1| PREDICTED: uncharacterized LOC101222540 [Cucumis sativus] Length = 277 Score = 199 bits (507), Expect = 6e-49 Identities = 137/279 (49%), Positives = 160/279 (57%), Gaps = 38/279 (13%) Frame = +3 Query: 99 NERETHDFMNVDSFSQLPFKRPAAPVKEKGIRLFGIEFMGEAPVT------EESDSCATK 260 +ERETHDFMNV+SFSQLPF RPA KEKGIRLFGIEF T EES+S T Sbjct: 6 SERETHDFMNVESFSQLPFIRPAP--KEKGIRLFGIEFGSRNAATVSASSIEESESGETI 63 Query: 261 VF-EDSKENEN-----AESVRKFECHYCCRTFPTSQALGGHQNAHKRERQHAKRAHLQST 422 + ED+KEN N ES R+FECHYCCR FPTSQALGGHQNAHKRERQHAKRAHLQS Sbjct: 64 IACEDAKENNNDNNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSN 123 Query: 423 LAHNSIHD-------GHMYGLVNY-RIGAATPTLSSYPSWXXXXXXXXXXXXXHHQFYRN 578 A +H H+YGL+NY R+GA +++YPSW +FY + Sbjct: 124 AA-AMVHGIGPFSDAAHVYGLMNYQRLGAT--HINNYPSWNRNSPAATAAAAAATRFYGS 180 Query: 579 QG-----ALSQTPINGSPLSMWRMSQVQTSHGYSH--DRMLLPLSPSSSFIAGDHSRLA- 734 G A + TPINGSPL+MWR+S VQ S+ S R + P F D + A Sbjct: 181 SGGQYSSAATATPINGSPLAMWRISAVQNSNLPSSFGGRERSSIHPLPLFSGDDMMKGAG 240 Query: 735 ----------PIDSSNPHSRRVHEAKTNLHDPVSLDLRL 821 S+ R V+EAKT D VSLDL L Sbjct: 241 GGGGTAVSGGGSGGSHQTGRFVYEAKT--ADQVSLDLHL 277