BLASTX nr result

ID: Coptis23_contig00025775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025775
         (965 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315691.1| predicted protein [Populus trichocarpa] gi|2...   254   3e-65
ref|XP_002265114.1| PREDICTED: uncharacterized protein LOC100267...   231   1e-58
emb|CBI28546.3| unnamed protein product [Vitis vinifera]              228   2e-57
ref|XP_003557056.1| PREDICTED: uncharacterized protein LOC100790...   224   2e-56
gb|AAV68844.1| hypothetical protein AT1G60460 [Arabidopsis thali...   216   7e-54

>ref|XP_002315691.1| predicted protein [Populus trichocarpa] gi|222864731|gb|EEF01862.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  254 bits (648), Expect = 3e-65
 Identities = 127/239 (53%), Positives = 176/239 (73%)
 Frame = +3

Query: 3   LKVGSGTACNSEAARNSGQIIEAVVIITELSEPPSSSCLMGCGTKTEVIYFQDFLPSTIP 182
           LKVGSG AC++E+ ++SG ++E V+II+E+    +  C   C +KTEV+YF+DF P +I 
Sbjct: 140 LKVGSGIACSTESHKSSGLMMEVVIIISEIES--TCPCFRECSSKTEVLYFKDFTPCSIS 197

Query: 183 QSVFNALPSIDWKSYGLSLRLNSVAVDGQSVLEWENLPPHSHIDIVIHCYHEQIVTQQMR 362
            S  N L +IDWKSYGL+L   +V   G  VLEWE+ P HS ID+V+HCYH+Q       
Sbjct: 198 HSTLNVLSTIDWKSYGLTLE--NVVDQGVCVLEWEDSPSHSQIDMVLHCYHKQYPMH--- 252

Query: 363 QKTHFDKNLVKKAVKRAMDDLKEKYTGTLLSAHAVKIQNYAPDLARTIAGLIFSSDDSEF 542
            KT  +++L+KKAVK A+++LKEK+ G LLSAHA+KI ++APDLAR+IAGLI SS+D +F
Sbjct: 253 -KTQLERHLIKKAVKAALNNLKEKHPGILLSAHALKICSHAPDLARSIAGLILSSNDPDF 311

Query: 543 QGECITLLGLQPQETGKEKVEDCITKNINAVIGMNDRKSQKNREPAPYLFEEDCIHEAD 719
           QGEC +LLGLQ +E G + VEDCI + I +VI MNDRKS++ +  AP+LFE+DC  +++
Sbjct: 312 QGECFSLLGLQSREIGADVVEDCIQEKIVSVIEMNDRKSRQRKVVAPFLFEDDCDQDSN 370


>ref|XP_002265114.1| PREDICTED: uncharacterized protein LOC100267199 [Vitis vinifera]
          Length = 456

 Score =  231 bits (590), Expect = 1e-58
 Identities = 125/239 (52%), Positives = 161/239 (67%)
 Frame = +3

Query: 3   LKVGSGTACNSEAARNSGQIIEAVVIITELSEPPSSSCLMGCGTKTEVIYFQDFLPSTIP 182
           LKVGSG AC +E+ R++GQ                           +V+ F DF P  I 
Sbjct: 231 LKVGSGLACRAESQRSTGQF--------------------------QVLCFYDFSPCAIS 264

Query: 183 QSVFNALPSIDWKSYGLSLRLNSVAVDGQSVLEWENLPPHSHIDIVIHCYHEQIVTQQMR 362
           QS  NAL SIDWK+YGL+LR + V  +G ++LEWE+LP ++HIDIV+HCYH+Q  +   +
Sbjct: 265 QSSMNALISIDWKNYGLTLR-SFVDQNGSALLEWEDLPTYAHIDIVLHCYHKQYPS---K 320

Query: 363 QKTHFDKNLVKKAVKRAMDDLKEKYTGTLLSAHAVKIQNYAPDLARTIAGLIFSSDDSEF 542
           +KT  D+NL+KKAVK A+DDLK KYTG LLSAHA+KI +YAPDLAR+I GLI SS DS+F
Sbjct: 321 RKTELDRNLIKKAVKLALDDLKAKYTGLLLSAHALKICSYAPDLARSITGLILSSSDSDF 380

Query: 543 QGECITLLGLQPQETGKEKVEDCITKNINAVIGMNDRKSQKNREPAPYLFEEDCIHEAD 719
           Q EC++LLGLQ QE     VED I + I +V+ +NDRK Q++RE   +LFE DCI E D
Sbjct: 381 QKECLSLLGLQSQEVEGGIVEDRIKEKIISVVEINDRKPQRSREAPSFLFENDCIQEQD 439


>emb|CBI28546.3| unnamed protein product [Vitis vinifera]
          Length = 463

 Score =  228 bits (581), Expect = 2e-57
 Identities = 125/241 (51%), Positives = 160/241 (66%), Gaps = 2/241 (0%)
 Frame = +3

Query: 3   LKVGSGTACNSEAARNSGQIIEAVVIITELSEPPSSSCLMGCGTKTEVIYFQDFLPSTIP 182
           LKVGSG AC +E+ R++GQ                            V+ F DF P  I 
Sbjct: 235 LKVGSGLACRAESQRSTGQ----------------------------VLCFYDFSPCAIS 266

Query: 183 QSVFNALPSIDWKSYGLSLRLNSVAVDGQSVLEWENLPPHSHIDIVIHCYHEQ--IVTQQ 356
           QS  NAL SIDWK+YGL+LR + V  +G ++LEWE+LP ++HIDIV+HCYH+Q  ++   
Sbjct: 267 QSSMNALISIDWKNYGLTLR-SFVDQNGSALLEWEDLPTYAHIDIVLHCYHKQYPLLYFM 325

Query: 357 MRQKTHFDKNLVKKAVKRAMDDLKEKYTGTLLSAHAVKIQNYAPDLARTIAGLIFSSDDS 536
             +KT  D+NL+KKAVK A+DDLK KYTG LLSAHA+KI +YAPDLAR+I GLI SS DS
Sbjct: 326 HLRKTELDRNLIKKAVKLALDDLKAKYTGLLLSAHALKICSYAPDLARSITGLILSSSDS 385

Query: 537 EFQGECITLLGLQPQETGKEKVEDCITKNINAVIGMNDRKSQKNREPAPYLFEEDCIHEA 716
           +FQ EC++LLGLQ QE     VED I + I +V+ +NDRK Q++RE   +LFE DCI E 
Sbjct: 386 DFQKECLSLLGLQSQEVEGGIVEDRIKEKIISVVEINDRKPQRSREAPSFLFENDCIQEQ 445

Query: 717 D 719
           D
Sbjct: 446 D 446


>ref|XP_003557056.1| PREDICTED: uncharacterized protein LOC100790078, partial [Glycine
           max]
          Length = 456

 Score =  224 bits (572), Expect = 2e-56
 Identities = 122/254 (48%), Positives = 165/254 (64%), Gaps = 16/254 (6%)
 Frame = +3

Query: 6   KVGSGTACNSEAARNSGQIIEAVVIITELSEPPSSSCLMGCGTKTEVIYFQDFLPSTIPQ 185
           KVGSG AC ++   +   ++EA ++I+ +S   +++C    G K EV+YF+DF P TI Q
Sbjct: 194 KVGSGEACCTDNRLHIELVMEAAIVISNISMQ-NTTCFREYGNKQEVLYFKDFSPCTISQ 252

Query: 186 SVFNALPSIDWKSYGLSLRLNSVAVDGQSVLEWENLPPHSHIDIVIHCYHEQIVTQQM-- 359
           S   AL SIDWK+YGL+L    V  D  ++LEWEN P  +HIDIV+H YH+Q        
Sbjct: 253 SSVKALQSIDWKTYGLNLG-GIVEQDDVTLLEWENFPTDTHIDIVLHSYHKQYPALNRSF 311

Query: 360 --------------RQKTHFDKNLVKKAVKRAMDDLKEKYTGTLLSAHAVKIQNYAPDLA 497
                         R+ +   +NLVKKAVK ++DDLK  +    LS+ AV+I++YAPDLA
Sbjct: 312 LSLSETFETTIPAPRKMSPLVRNLVKKAVKLSLDDLKANHPQAFLSSRAVEIRSYAPDLA 371

Query: 498 RTIAGLIFSSDDSEFQGECITLLGLQPQETGKEKVEDCITKNINAVIGMNDRKSQKNREP 677
           +TIAGLI SS D +FQGEC +LLGLQ QE G E VE+CI + I +VI MND+KS  ++EP
Sbjct: 372 KTIAGLILSSSDLDFQGECFSLLGLQSQEVGTEIVENCIEERIVSVIEMNDKKSYNSQEP 431

Query: 678 APYLFEEDCIHEAD 719
           AP+LFEED + E +
Sbjct: 432 APFLFEEDPVEELE 445


>gb|AAV68844.1| hypothetical protein AT1G60460 [Arabidopsis thaliana]
          Length = 319

 Score =  216 bits (550), Expect = 7e-54
 Identities = 113/230 (49%), Positives = 151/230 (65%)
 Frame = +3

Query: 3   LKVGSGTACNSEAARNSGQIIEAVVIITELSEPPSSSCLMGCGTKTEVIYFQDFLPSTIP 182
           LKVGSGT C  +  +  G  +E V++I++L E  +  C   C  KTEV+YF +FLPS +P
Sbjct: 70  LKVGSGTVCQEDKHKRVGGTMEVVIVISDLLES-TQHCSRSCNGKTEVLYFDNFLPSPVP 128

Query: 183 QSVFNALPSIDWKSYGLSLRLNSVAVDGQSVLEWENLPPHSHIDIVIHCYHEQIVTQQMR 362
               +AL  IDWK YGL L  N    DG   LEW+N P +  I I +H YH Q  T   R
Sbjct: 129 HLALSALKKIDWKKYGLILA-NVNDQDGHVFLEWDNFPSYVQIQIALHWYHNQYPT---R 184

Query: 363 QKTHFDKNLVKKAVKRAMDDLKEKYTGTLLSAHAVKIQNYAPDLARTIAGLIFSSDDSEF 542
           QK     +L+KK +K A+D+LK K+ G LLS+H+ KI +Y PDLAR+IAGLIFSS D +F
Sbjct: 185 QKNGPGISLLKKGIKNALDNLKAKHEGFLLSSHSRKICSYVPDLARSIAGLIFSSTDLDF 244

Query: 543 QGECITLLGLQPQETGKEKVEDCITKNINAVIGMNDRKSQKNREPAPYLF 692
           QG+C+++LG Q QE  ++ VE+ I + I  VIGMN+RK QK++E AP+LF
Sbjct: 245 QGDCLSVLGFQTQEVERDTVENYIQRKIVTVIGMNERKPQKDQEAAPFLF 294


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