BLASTX nr result

ID: Coptis23_contig00025763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025763
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273654.2| PREDICTED: uncharacterized protein LOC100254...   436   e-120
ref|XP_004134347.1| PREDICTED: uncharacterized protein LOC101217...   425   e-117
ref|XP_002511728.1| conserved hypothetical protein [Ricinus comm...   422   e-116
ref|XP_002320062.1| predicted protein [Populus trichocarpa] gi|2...   417   e-114
ref|XP_002876585.1| hypothetical protein ARALYDRAFT_486559 [Arab...   405   e-111

>ref|XP_002273654.2| PREDICTED: uncharacterized protein LOC100254100 [Vitis vinifera]
          Length = 633

 Score =  436 bits (1121), Expect = e-120
 Identities = 210/250 (84%), Positives = 228/250 (91%)
 Frame = -1

Query: 755 HIEQWQDIVMSFHGDADLKHLGVKETIERIKQVWTVGAKLYGIPESFIRACVGSCPVCCD 576
           HI QWQDIVMSFHGDADLKHL VKETIERIKQVWTVGAK YGIPESFIR CV +CPVC  
Sbjct: 187 HINQWQDIVMSFHGDADLKHLAVKETIERIKQVWTVGAKFYGIPESFIRVCVAACPVC-S 245

Query: 575 GSSSSAPKGKRRRFEYTESFDVPAKEVPSRLQQLAAKHKVVLCIRQKYIRYKPFMAEVKD 396
           GSS SAP+ KRRRFEYTESFDVPAKEVPSRLQQLAAKHKVVLCIRQKYIRYKPFMAEVKD
Sbjct: 246 GSSGSAPRSKRRRFEYTESFDVPAKEVPSRLQQLAAKHKVVLCIRQKYIRYKPFMAEVKD 305

Query: 395 YACHRAGEPAVKKSKVLKREPYASKRCGCGFRIRAIVPIANYNEKDKSFVYQEEGVAVFK 216
           YACHRAGEPA KKS++LKREPYASKRCGCGFRIRAIVPIANYNEKDK+FVYQEEG+AVFK
Sbjct: 306 YACHRAGEPAAKKSRILKREPYASKRCGCGFRIRAIVPIANYNEKDKTFVYQEEGMAVFK 365

Query: 215 LYAVHTGHEPGPLDGNARIIHRVVGNKSGELLMDQDTIYGMSEEMETETFGFMGKDESYL 36
           LYAVH+GHEPGPLDGNARI+HRVVG+K G  LMDQ+ +YGM+E+ E E FG +GK++   
Sbjct: 366 LYAVHSGHEPGPLDGNARIMHRVVGHKGG-YLMDQEMVYGMAEDGENEGFGLIGKEDGDF 424

Query: 35  QLSVLHQMQD 6
           QLSVL Q+Q+
Sbjct: 425 QLSVLQQLQE 434


>ref|XP_004134347.1| PREDICTED: uncharacterized protein LOC101217172 [Cucumis sativus]
           gi|449480338|ref|XP_004155865.1| PREDICTED:
           uncharacterized protein LOC101228679 [Cucumis sativus]
          Length = 640

 Score =  425 bits (1092), Expect = e-117
 Identities = 200/250 (80%), Positives = 223/250 (89%)
 Frame = -1

Query: 755 HIEQWQDIVMSFHGDADLKHLGVKETIERIKQVWTVGAKLYGIPESFIRACVGSCPVCCD 576
           HI QWQDIV SFHGD DLKHLG+KETIERIKQVWTVGAK YGIPES+IR CV +CPVC  
Sbjct: 192 HISQWQDIVTSFHGDTDLKHLGLKETIERIKQVWTVGAKFYGIPESYIRVCVAACPVCNS 251

Query: 575 GSSSSAPKGKRRRFEYTESFDVPAKEVPSRLQQLAAKHKVVLCIRQKYIRYKPFMAEVKD 396
            SS+S  + KRRRFEYT++ +VPAKEVP +LQQLAAKHKVVLCIRQKYIRYKPFMAEVKD
Sbjct: 252 ASSASGSRSKRRRFEYTDTLEVPAKEVPHKLQQLAAKHKVVLCIRQKYIRYKPFMAEVKD 311

Query: 395 YACHRAGEPAVKKSKVLKREPYASKRCGCGFRIRAIVPIANYNEKDKSFVYQEEGVAVFK 216
           YACHRAGEPA KKSK+LKREPYASKRCGCGFRIRAIVPI NYNEKDK+FVYQ+EGVAVFK
Sbjct: 312 YACHRAGEPATKKSKILKREPYASKRCGCGFRIRAIVPITNYNEKDKTFVYQDEGVAVFK 371

Query: 215 LYAVHTGHEPGPLDGNARIIHRVVGNKSGELLMDQDTIYGMSEEMETETFGFMGKDESYL 36
           LYAVH+GHEPGPLDGNARI+HRV+G+K G LLMD +T+YG+++EME E F  MGKDE  L
Sbjct: 372 LYAVHSGHEPGPLDGNARIMHRVIGHKGG-LLMDHETVYGVNDEMENEEFRLMGKDEGDL 430

Query: 35  QLSVLHQMQD 6
           QLS+L QM +
Sbjct: 431 QLSILQQMHE 440


>ref|XP_002511728.1| conserved hypothetical protein [Ricinus communis]
           gi|223548908|gb|EEF50397.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 630

 Score =  422 bits (1086), Expect = e-116
 Identities = 202/250 (80%), Positives = 223/250 (89%)
 Frame = -1

Query: 755 HIEQWQDIVMSFHGDADLKHLGVKETIERIKQVWTVGAKLYGIPESFIRACVGSCPVCCD 576
           HI QWQDIVMSFHGDADLKHLG++ETIERIKQVWTVGAK YGIPES+IR CV +CPVC  
Sbjct: 186 HINQWQDIVMSFHGDADLKHLGLRETIERIKQVWTVGAKFYGIPESYIRVCVAACPVC-S 244

Query: 575 GSSSSAPKGKRRRFEYTESFDVPAKEVPSRLQQLAAKHKVVLCIRQKYIRYKPFMAEVKD 396
            S  S  + KRRRFEYTESFDVPAKEVP RLQQLAAKHKVVLCIRQKYIRYKPFMAEVKD
Sbjct: 245 ASEGSGSRNKRRRFEYTESFDVPAKEVPHRLQQLAAKHKVVLCIRQKYIRYKPFMAEVKD 304

Query: 395 YACHRAGEPAVKKSKVLKREPYASKRCGCGFRIRAIVPIANYNEKDKSFVYQEEGVAVFK 216
           YACHRAGEP  KKS++LKREPYASKRCGCGFRIRAIVPI NYNEKDK+FVYQEEG+AVFK
Sbjct: 305 YACHRAGEPVAKKSRMLKREPYASKRCGCGFRIRAIVPITNYNEKDKTFVYQEEGMAVFK 364

Query: 215 LYAVHTGHEPGPLDGNARIIHRVVGNKSGELLMDQDTIYGMSEEMETETFGFMGKDESYL 36
           LYAVH+GHEPGPLDGNARI+HRVVG+K G  +MDQ+  YG+ E++E E FGF+GKD+  L
Sbjct: 365 LYAVHSGHEPGPLDGNARIMHRVVGHK-GSFIMDQEFDYGVREDLENEGFGFIGKDDGEL 423

Query: 35  QLSVLHQMQD 6
           QLSVL Q+Q+
Sbjct: 424 QLSVLQQVQE 433


>ref|XP_002320062.1| predicted protein [Populus trichocarpa] gi|222860835|gb|EEE98377.1|
           predicted protein [Populus trichocarpa]
          Length = 638

 Score =  417 bits (1072), Expect = e-114
 Identities = 196/250 (78%), Positives = 225/250 (90%)
 Frame = -1

Query: 755 HIEQWQDIVMSFHGDADLKHLGVKETIERIKQVWTVGAKLYGIPESFIRACVGSCPVCCD 576
           HI+QWQDIV SFHGDADLKHLG++ETIERIKQVWTVGAK YGIPESFIR CV +CPVC  
Sbjct: 195 HIDQWQDIVTSFHGDADLKHLGLRETIERIKQVWTVGAKFYGIPESFIRVCVAACPVCST 254

Query: 575 GSSSSAPKGKRRRFEYTESFDVPAKEVPSRLQQLAAKHKVVLCIRQKYIRYKPFMAEVKD 396
              S++ + KRRRFEYTESFDVPAKEVP++LQQLAAKHKVVLCIRQKYIRYKPFMAEVKD
Sbjct: 255 SEGSNS-RNKRRRFEYTESFDVPAKEVPTKLQQLAAKHKVVLCIRQKYIRYKPFMAEVKD 313

Query: 395 YACHRAGEPAVKKSKVLKREPYASKRCGCGFRIRAIVPIANYNEKDKSFVYQEEGVAVFK 216
           YACHRAGEP  KKS++LKREPYASKRCGCGFRIRAIVPI NYNEKDK+FVYQEEG+A+FK
Sbjct: 314 YACHRAGEPVAKKSRMLKREPYASKRCGCGFRIRAIVPITNYNEKDKTFVYQEEGMAMFK 373

Query: 215 LYAVHTGHEPGPLDGNARIIHRVVGNKSGELLMDQDTIYGMSEEMETETFGFMGKDESYL 36
           LYAVH+GHEPGPLDGNARIIHRVVG+K G  +MDQ+ +YG+ E++++E FG +GKD+   
Sbjct: 374 LYAVHSGHEPGPLDGNARIIHRVVGHKGG-FMMDQEMVYGVREDVDSEGFGLLGKDDGEF 432

Query: 35  QLSVLHQMQD 6
           +LSVL Q+Q+
Sbjct: 433 RLSVLQQVQE 442


>ref|XP_002876585.1| hypothetical protein ARALYDRAFT_486559 [Arabidopsis lyrata subsp.
           lyrata] gi|297322423|gb|EFH52844.1| hypothetical protein
           ARALYDRAFT_486559 [Arabidopsis lyrata subsp. lyrata]
          Length = 646

 Score =  405 bits (1042), Expect = e-111
 Identities = 196/252 (77%), Positives = 221/252 (87%), Gaps = 2/252 (0%)
 Frame = -1

Query: 755 HIEQWQDIVMSFHGDADLKHLGVKETIERIKQVWTVGAKLYGIPESFIRACVGSCPVCCD 576
           HI QWQDIVM FHGD DLKHLG KETIERIKQVWTVGAKLYGIPESFIR CV +CPVC +
Sbjct: 194 HINQWQDIVMGFHGDGDLKHLGPKETIERIKQVWTVGAKLYGIPESFIRVCVAACPVC-N 252

Query: 575 GSSSSAPKGKRRRFEYTESFDVPAKEVPSRLQQLAAKHKVVLCIRQKYIRYKPFMAEVKD 396
             S S  + KRRRFEYTESFDVPAKEVP RLQQLAAKHKVVLCIRQKYIRYKPFMAEVKD
Sbjct: 253 ADSGSGSRNKRRRFEYTESFDVPAKEVPDRLQQLAAKHKVVLCIRQKYIRYKPFMAEVKD 312

Query: 395 YACHRAGEP-AVKKSKVLKREPYASKRCGCGFRIRAIVPIANYNEKDKSFVYQEEGVAVF 219
           YACHRAGEP ++KKS++LKREPY SKRCGCGFRIRAIVPIANY+EK K+FVYQEEG AVF
Sbjct: 313 YACHRAGEPVSIKKSRILKREPYQSKRCGCGFRIRAIVPIANYSEKTKTFVYQEEGTAVF 372

Query: 218 KLYAVHTGHEPGPLDGNARIIHRVVGNKSGELLMDQDTIYGMSEEMETETFGFMGKDE-S 42
           KLYAVH+GHEPG +DGNARI+HRVVG+K    LMDQ+T+YG+ +++ETE  G  GKD+ +
Sbjct: 373 KLYAVHSGHEPGAMDGNARIMHRVVGHKG--FLMDQETVYGVQDDLETEGMGLTGKDDGA 430

Query: 41  YLQLSVLHQMQD 6
            +Q +VLHQ+Q+
Sbjct: 431 EMQFAVLHQVQE 442


Top