BLASTX nr result

ID: Coptis23_contig00025761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025761
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327484.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus...   103   1e-20
ref|XP_002305261.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
emb|CBI20026.3| unnamed protein product [Vitis vinifera]              102   3e-20
ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containi...   102   3e-20

>ref|XP_002327484.1| predicted protein [Populus trichocarpa] gi|222836038|gb|EEE74459.1|
           predicted protein [Populus trichocarpa]
          Length = 486

 Score =  106 bits (264), Expect = 2e-21
 Identities = 43/61 (70%), Positives = 53/61 (86%)
 Frame = +2

Query: 2   FFPRWKEKHQVRYTASREGVSLQMPPLYSMVIQESERGNWHIPMVTSDDIDTPRQWVCAA 181
           FFPRWKEKHQVR + SR G++LQMPP YS+VIQESE G+WH+P  T+DD++TPRQW+CA 
Sbjct: 422 FFPRWKEKHQVRLSVSRSGIALQMPPPYSIVIQESENGSWHVPTTTNDDLETPRQWLCAT 481

Query: 182 R 184
           R
Sbjct: 482 R 482


>ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223534642|gb|EEF36338.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 589

 Score =  103 bits (258), Expect = 1e-20
 Identities = 41/61 (67%), Positives = 53/61 (86%)
 Frame = +2

Query: 2   FFPRWKEKHQVRYTASREGVSLQMPPLYSMVIQESERGNWHIPMVTSDDIDTPRQWVCAA 181
           FFPRWKEKHQVR + SR G++L MPP YS+VIQESE G+WH+P ++ DD++TPRQW+CA+
Sbjct: 522 FFPRWKEKHQVRLSVSRSGIALHMPPPYSIVIQESENGSWHVPTISEDDLETPRQWLCAS 581

Query: 182 R 184
           R
Sbjct: 582 R 582


>ref|XP_002305261.1| predicted protein [Populus trichocarpa] gi|222848225|gb|EEE85772.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score =  103 bits (257), Expect = 1e-20
 Identities = 42/61 (68%), Positives = 50/61 (81%)
 Frame = +2

Query: 2   FFPRWKEKHQVRYTASREGVSLQMPPLYSMVIQESERGNWHIPMVTSDDIDTPRQWVCAA 181
           FFPRWKEKHQVR + SR G++L MPP YS+VIQESE G WH+P  T DD++TPRQW+CA 
Sbjct: 452 FFPRWKEKHQVRLSVSRSGIALHMPPPYSIVIQESENGGWHVPTTTGDDLETPRQWLCAT 511

Query: 182 R 184
           R
Sbjct: 512 R 512


>emb|CBI20026.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  102 bits (255), Expect = 3e-20
 Identities = 43/61 (70%), Positives = 51/61 (83%)
 Frame = +2

Query: 2   FFPRWKEKHQVRYTASREGVSLQMPPLYSMVIQESERGNWHIPMVTSDDIDTPRQWVCAA 181
           FFPRWKEKHQVR T +R G  L MPP YS+VIQESE+G+WH+P VT DD++TPRQW+CA 
Sbjct: 267 FFPRWKEKHQVRLTITRRGPVLHMPPPYSIVIQESEQGSWHVPTVTGDDLETPRQWLCAT 326

Query: 182 R 184
           R
Sbjct: 327 R 327


>ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 526

 Score =  102 bits (255), Expect = 3e-20
 Identities = 43/61 (70%), Positives = 51/61 (83%)
 Frame = +2

Query: 2   FFPRWKEKHQVRYTASREGVSLQMPPLYSMVIQESERGNWHIPMVTSDDIDTPRQWVCAA 181
           FFPRWKEKHQVR T +R G  L MPP YS+VIQESE+G+WH+P VT DD++TPRQW+CA 
Sbjct: 454 FFPRWKEKHQVRLTITRRGPVLHMPPPYSIVIQESEQGSWHVPTVTGDDLETPRQWLCAT 513

Query: 182 R 184
           R
Sbjct: 514 R 514


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