BLASTX nr result

ID: Coptis23_contig00025760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025760
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269472.2| PREDICTED: probable receptor-like protein ki...   136   2e-30
emb|CBI17584.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_002533280.1| serine-threonine protein kinase, plant-type,...   109   2e-22
ref|XP_002310198.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22
ref|XP_003611889.1| LysM-domain containing receptor-like kinase ...   107   1e-21

>ref|XP_002269472.2| PREDICTED: probable receptor-like protein kinase At1g49730 [Vitis
           vinifera]
          Length = 608

 Score =  136 bits (342), Expect = 2e-30
 Identities = 69/107 (64%), Positives = 84/107 (78%), Gaps = 1/107 (0%)
 Frame = +3

Query: 42  MTASLLSFILLVFHCITL-ITAQTPSNNSTDFSCTSDSPPFCDTYVVYRSQAPDFLNLGP 218
           MT SLLSF+LL+F   T  ITAQ+P+   T+FSCT+DSP  C TYV+YR+QAP FL++G 
Sbjct: 1   MTVSLLSFVLLLFISSTNHITAQSPATPVTNFSCTTDSPASCQTYVIYRAQAPGFLDVGN 60

Query: 219 ISDLFGVSRLAIQKDSNLVSEETQLYPDQLLLVQISCGCTGLHFFAN 359
           ISDLFG+SRL+I + SNL SEE +L PDQLLLV I C CTG H+FAN
Sbjct: 61  ISDLFGISRLSIAEASNLASEEARLSPDQLLLVPILCSCTGNHYFAN 107


>emb|CBI17584.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  136 bits (342), Expect = 2e-30
 Identities = 69/107 (64%), Positives = 84/107 (78%), Gaps = 1/107 (0%)
 Frame = +3

Query: 42  MTASLLSFILLVFHCITL-ITAQTPSNNSTDFSCTSDSPPFCDTYVVYRSQAPDFLNLGP 218
           MT SLLSF+LL+F   T  ITAQ+P+   T+FSCT+DSP  C TYV+YR+QAP FL++G 
Sbjct: 1   MTVSLLSFVLLLFISSTNHITAQSPATPVTNFSCTTDSPASCQTYVIYRAQAPGFLDVGN 60

Query: 219 ISDLFGVSRLAIQKDSNLVSEETQLYPDQLLLVQISCGCTGLHFFAN 359
           ISDLFG+SRL+I + SNL SEE +L PDQLLLV I C CTG H+FAN
Sbjct: 61  ISDLFGISRLSIAEASNLASEEARLSPDQLLLVPILCSCTGNHYFAN 107


>ref|XP_002533280.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223526905|gb|EEF29112.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 620

 Score =  109 bits (273), Expect = 2e-22
 Identities = 58/112 (51%), Positives = 76/112 (67%)
 Frame = +3

Query: 24  QVSPTAMTASLLSFILLVFHCITLITAQTPSNNSTDFSCTSDSPPFCDTYVVYRSQAPDF 203
           ++S   +++  +  + L+F   T +TAQ+P    T+FSC+ D P  C TYV Y +Q P+F
Sbjct: 2   EISLFFLSSFQVLLLFLLFISTTYVTAQSPQG--TNFSCSVDLPSPCQTYVAYYAQPPNF 59

Query: 204 LNLGPISDLFGVSRLAIQKDSNLVSEETQLYPDQLLLVQISCGCTGLHFFAN 359
           LNLG ISDLF VSRL+I   SNLVSE+  L P+QLLLV I+CGCTG   FAN
Sbjct: 60  LNLGNISDLFAVSRLSIASASNLVSEDIPLMPNQLLLVPITCGCTGNSSFAN 111


>ref|XP_002310198.1| predicted protein [Populus trichocarpa] gi|222853101|gb|EEE90648.1|
           predicted protein [Populus trichocarpa]
          Length = 601

 Score =  109 bits (273), Expect = 2e-22
 Identities = 58/101 (57%), Positives = 69/101 (68%)
 Frame = +3

Query: 57  LSFILLVFHCITLITAQTPSNNSTDFSCTSDSPPFCDTYVVYRSQAPDFLNLGPISDLFG 236
           L F++LVF   T +TAQ P    T+FSC  DSP  C TY+ Y +Q PDFL+LG IS LFG
Sbjct: 14  LFFLVLVFFS-TYVTAQAPPG--TNFSCPVDSPTSCPTYISYLAQPPDFLDLGKISHLFG 70

Query: 237 VSRLAIQKDSNLVSEETQLYPDQLLLVQISCGCTGLHFFAN 359
           +SR  I   SNLVSE+T L+P+QLLLV I CGCTG   F N
Sbjct: 71  ISRTLIASASNLVSEDTPLFPNQLLLVPIRCGCTGSQSFVN 111


>ref|XP_003611889.1| LysM-domain containing receptor-like kinase [Medicago truncatula]
           gi|94982942|gb|ABF50224.1| Nod factor perception protein
           [Medicago truncatula] gi|355513224|gb|AES94847.1|
           LysM-domain containing receptor-like kinase [Medicago
           truncatula] gi|357394655|gb|AET75784.1| NFP [Cloning
           vector pHUGE-MtNFS]
          Length = 595

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/99 (51%), Positives = 72/99 (72%)
 Frame = +3

Query: 63  FILLVFHCITLITAQTPSNNSTDFSCTSDSPPFCDTYVVYRSQAPDFLNLGPISDLFGVS 242
           F++L+   +T I+AQ    + T+F+C  DSPP C+TYV YR+Q+P+FL+L  ISD+F +S
Sbjct: 14  FLVLMLFFLTNISAQPLYISETNFTCPVDSPPSCETYVAYRAQSPNFLSLSNISDIFNLS 73

Query: 243 RLAIQKDSNLVSEETQLYPDQLLLVQISCGCTGLHFFAN 359
            L I K SN+ +E+ +L PDQLLLV ++CGCT  H FAN
Sbjct: 74  PLRIAKASNIEAEDKKLIPDQLLLVPVTCGCTKNHSFAN 112


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