BLASTX nr result

ID: Coptis23_contig00025751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025751
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520876.1| two-component system sensor histidine kinase...   142   2e-32
ref|XP_002325489.1| type-a response regulator [Populus trichocar...   141   5e-32
emb|CBX43990.1| putative A-type response regulator 8 [Populus x ...   140   1e-31
dbj|BAL43558.1| type-A response regulator [Petunia x hybrida]         137   7e-31
emb|CBI25350.3| unnamed protein product [Vitis vinifera]              137   7e-31

>ref|XP_002520876.1| two-component system sensor histidine kinase/response regulator,
           putative [Ricinus communis] gi|223540007|gb|EEF41585.1|
           two-component system sensor histidine kinase/response
           regulator, putative [Ricinus communis]
          Length = 155

 Score =  142 bits (359), Expect = 2e-32
 Identities = 70/90 (77%), Positives = 78/90 (86%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   LGIGDQ-KGTTENKELKVNMVITDYCMPGMTGYELLKKIKESSTMKEIPVVIVSSENIPT 179
           LG+GD  +   EN   KVN++ITDYCMPGMTGYELLKKIKESS MKE+PVVIVSSENIPT
Sbjct: 61  LGLGDDDRNCLENNVSKVNLIITDYCMPGMTGYELLKKIKESSIMKEVPVVIVSSENIPT 120

Query: 180 RINKCIEEGAQEFMLKPIKPSDVKKLRCQM 269
           RINKC+EEGAQ FMLKP+K SDVKKLRC +
Sbjct: 121 RINKCLEEGAQMFMLKPLKLSDVKKLRCDI 150


>ref|XP_002325489.1| type-a response regulator [Populus trichocarpa]
           gi|222862364|gb|EEE99870.1| type-a response regulator
           [Populus trichocarpa]
          Length = 154

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/90 (76%), Positives = 80/90 (88%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   LGIGDQKGTT-ENKELKVNMVITDYCMPGMTGYELLKKIKESSTMKEIPVVIVSSENIPT 179
           LG+GD+K T+ E+   KVN++ITDYCMPGMTGYELLKKIKESS +KEIPVVI+SSENIPT
Sbjct: 60  LGLGDEKRTSLEDNVSKVNLIITDYCMPGMTGYELLKKIKESSMLKEIPVVIMSSENIPT 119

Query: 180 RINKCIEEGAQEFMLKPIKPSDVKKLRCQM 269
           RINKC+EEGAQ FMLKP+K SDV KLRC +
Sbjct: 120 RINKCLEEGAQMFMLKPLKQSDVVKLRCNL 149


>emb|CBX43990.1| putative A-type response regulator 8 [Populus x canadensis]
          Length = 154

 Score =  140 bits (352), Expect = 1e-31
 Identities = 68/90 (75%), Positives = 80/90 (88%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   LGIGDQKGTT-ENKELKVNMVITDYCMPGMTGYELLKKIKESSTMKEIPVVIVSSENIPT 179
           LG+GD+K T+ E+   KVN++ITDYCMPGMTGYELLKKIKESS +K+IPVVI+SSENIPT
Sbjct: 60  LGLGDEKRTSLEDNVSKVNLIITDYCMPGMTGYELLKKIKESSMLKKIPVVIMSSENIPT 119

Query: 180 RINKCIEEGAQEFMLKPIKPSDVKKLRCQM 269
           RINKC+EEGAQ FMLKP+K SDV KLRC +
Sbjct: 120 RINKCLEEGAQMFMLKPLKQSDVVKLRCNL 149


>dbj|BAL43558.1| type-A response regulator [Petunia x hybrida]
          Length = 158

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/86 (74%), Positives = 77/86 (89%)
 Frame = +3

Query: 12  GDQKGTTENKELKVNMVITDYCMPGMTGYELLKKIKESSTMKEIPVVIVSSENIPTRINK 191
           GDQ+ +T     KVNM+ITDYCMPGMTGYELLKKIKESS +K++PVVI+SSENIPTRI++
Sbjct: 66  GDQEHSTNGNGSKVNMIITDYCMPGMTGYELLKKIKESSILKDVPVVIMSSENIPTRIDQ 125

Query: 192 CIEEGAQEFMLKPIKPSDVKKLRCQM 269
           C+EEGAQ FMLKP+K SDVK+LRCQ+
Sbjct: 126 CMEEGAQMFMLKPLKHSDVKRLRCQL 151


>emb|CBI25350.3| unnamed protein product [Vitis vinifera]
          Length = 141

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/90 (71%), Positives = 79/90 (87%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   LGIGDQKGTTENKEL-KVNMVITDYCMPGMTGYELLKKIKESSTMKEIPVVIVSSENIPT 179
           LG+GD + T+    + KVN++ITDYCMPGMTGYELLK++K+SS +KE+PVVI+SSENIPT
Sbjct: 48  LGLGDNQQTSHKASVSKVNLIITDYCMPGMTGYELLKRVKQSSILKEVPVVIMSSENIPT 107

Query: 180 RINKCIEEGAQEFMLKPIKPSDVKKLRCQM 269
           RINKC+EEGAQ FMLKP+K SDVKKLRC +
Sbjct: 108 RINKCLEEGAQMFMLKPLKQSDVKKLRCYL 137


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