BLASTX nr result

ID: Coptis23_contig00025742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025742
         (1183 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321460.1| predicted protein [Populus trichocarpa] gi|2...    71   6e-10
ref|XP_002273782.1| PREDICTED: uncharacterized protein LOC100256...    68   4e-09
gb|AAF25982.1|AC013354_1 F15H18.5 [Arabidopsis thaliana]               67   7e-09
gb|ACS88372.1| putative protein [Coix lacryma-jobi]                    67   9e-09
ref|XP_002524403.1| protein binding protein, putative [Ricinus c...    67   9e-09

>ref|XP_002321460.1| predicted protein [Populus trichocarpa] gi|222868456|gb|EEF05587.1|
           predicted protein [Populus trichocarpa]
          Length = 466

 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 36/62 (58%), Positives = 43/62 (69%)
 Frame = -3

Query: 188 IAECFAFLVCTKWYNPLIHGQDYYSGASLSSMSIRSSDWNGSSLFSSKMDPNQDGMCVLQ 9
           IAECFAFLVCTKW NP+IH       AS SSM+IR  DWNG  + S + + +QD MC LQ
Sbjct: 189 IAECFAFLVCTKWSNPVIHRNSQTREAS-SSMTIRYLDWNGGLMVSPEENQHQDRMCGLQ 247

Query: 8   NI 3
           +I
Sbjct: 248 DI 249


>ref|XP_002273782.1| PREDICTED: uncharacterized protein LOC100256061 [Vitis vinifera]
           gi|297734166|emb|CBI15413.3| unnamed protein product
           [Vitis vinifera]
          Length = 466

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 33/62 (53%), Positives = 41/62 (66%)
 Frame = -3

Query: 188 IAECFAFLVCTKWYNPLIHGQDYYSGASLSSMSIRSSDWNGSSLFSSKMDPNQDGMCVLQ 9
           IAE FAFLVCTKW NP+IH   + + A  SS +IR  DWN   + S+  D +QD MC LQ
Sbjct: 189 IAESFAFLVCTKWSNPVIHRNSHTTEAGSSSTTIRYLDWNSGLVVSTDEDQHQDRMCGLQ 248

Query: 8   NI 3
           +I
Sbjct: 249 DI 250


>gb|AAF25982.1|AC013354_1 F15H18.5 [Arabidopsis thaliana]
          Length = 498

 Score = 67.4 bits (163), Expect = 7e-09
 Identities = 33/63 (52%), Positives = 39/63 (61%)
 Frame = -3

Query: 191 RIAECFAFLVCTKWYNPLIHGQDYYSGASLSSMSIRSSDWNGSSLFSSKMDPNQDGMCVL 12
           RIAECFAFLVCTKW NP+IH          SS SIR  DWN   + + + D +QD  C L
Sbjct: 208 RIAECFAFLVCTKWSNPVIHRSSRARETGSSSTSIRYLDWNSGLVVAPEEDRHQDRWCGL 267

Query: 11  QNI 3
           Q+I
Sbjct: 268 QDI 270


>gb|ACS88372.1| putative protein [Coix lacryma-jobi]
          Length = 564

 Score = 67.0 bits (162), Expect = 9e-09
 Identities = 33/65 (50%), Positives = 41/65 (63%)
 Frame = -3

Query: 197 YGRIAECFAFLVCTKWYNPLIHGQDYYSGASLSSMSIRSSDWNGSSLFSSKMDPNQDGMC 18
           YG IAECFAFLVCT+W+NP+IH    +  AS SS SIR  DW    +  S  D  Q+ +C
Sbjct: 304 YG-IAECFAFLVCTRWFNPMIHKSPTHGEASSSSASIRYRDWESGLVLPSLEDHEQERLC 362

Query: 17  VLQNI 3
            L +I
Sbjct: 363 GLPDI 367


>ref|XP_002524403.1| protein binding protein, putative [Ricinus communis]
           gi|223536364|gb|EEF38014.1| protein binding protein,
           putative [Ricinus communis]
          Length = 452

 Score = 67.0 bits (162), Expect = 9e-09
 Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
 Frame = -3

Query: 197 YGRIAECFAFLVCTKWYNPLIHGQDYYSGASLSSMSIRSSDWNGSSLFSSKMDPNQDG-M 21
           YG IAECFAFLVCTKW+NP IH   +  G+S SSM+I   DWN   + SS  D +Q+G +
Sbjct: 190 YG-IAECFAFLVCTKWHNPAIHRNSHIVGSS-SSMTISYIDWNRGLVVSSDEDRHQNGRI 247

Query: 20  CVLQNI 3
           C LQ+I
Sbjct: 248 CNLQDI 253


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