BLASTX nr result

ID: Coptis23_contig00025737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025737
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523964.1| TATA-binding protein-associated factor MOT1,...   134   8e-30
ref|XP_003540105.1| PREDICTED: TATA-binding protein-associated f...   130   9e-29
ref|XP_003633864.1| PREDICTED: TATA-binding protein-associated f...   127   1e-27
ref|XP_003633863.1| PREDICTED: TATA-binding protein-associated f...   127   1e-27
emb|CBI40030.3| unnamed protein product [Vitis vinifera]              127   1e-27

>ref|XP_002523964.1| TATA-binding protein-associated factor MOT1, putative [Ricinus
            communis] gi|223536691|gb|EEF38332.1| TATA-binding
            protein-associated factor MOT1, putative [Ricinus
            communis]
          Length = 1920

 Score =  134 bits (337), Expect = 8e-30
 Identities = 61/105 (58%), Positives = 81/105 (77%)
 Frame = -2

Query: 320  ESLQFVVDPLWNELTSVSGVQRQVASIILIAWFKELQSNSISGQDVSISGYVGRLRKWLL 141
            +S ++V+DPLWN L S+SGVQRQVAS++LI+WFKE++ N  S     +  +   + KWLL
Sbjct: 893  DSFKYVIDPLWNALMSLSGVQRQVASMVLISWFKEIKCNEYSESHAVLPAFPNHVEKWLL 952

Query: 140  DLLSCADPSMPTKDSVLPYTELSRTYAKMRSEASLLFAAVASSGI 6
            DLLSC+DP+ PTKDS+ PY+ELSRTY KMR+EAS L  A+ SSG+
Sbjct: 953  DLLSCSDPAFPTKDSIHPYSELSRTYTKMRNEASQLLRAIESSGM 997


>ref|XP_003540105.1| PREDICTED: TATA-binding protein-associated factor 172-like [Glycine
            max]
          Length = 2047

 Score =  130 bits (328), Expect = 9e-29
 Identities = 61/104 (58%), Positives = 83/104 (79%)
 Frame = -2

Query: 317  SLQFVVDPLWNELTSVSGVQRQVASIILIAWFKELQSNSISGQDVSISGYVGRLRKWLLD 138
            SL++V+DPLW+ LTS+SGVQRQVAS++L++WFKE+++ + S    ++ G  G L+ WLLD
Sbjct: 907  SLKYVIDPLWSSLTSLSGVQRQVASMVLVSWFKEIKNRNSSK---NLDGIPGALKDWLLD 963

Query: 137  LLSCADPSMPTKDSVLPYTELSRTYAKMRSEASLLFAAVASSGI 6
            LL+C+DP+ PTKDS+LPY ELSRTY KMR+EA  L   V SSG+
Sbjct: 964  LLACSDPAFPTKDSILPYAELSRTYGKMRNEAGQLLNVVKSSGM 1007


>ref|XP_003633864.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 3
            [Vitis vinifera]
          Length = 2060

 Score =  127 bits (318), Expect = 1e-27
 Identities = 61/103 (59%), Positives = 77/103 (74%)
 Frame = -2

Query: 314  LQFVVDPLWNELTSVSGVQRQVASIILIAWFKELQSNSISGQDVSISGYVGRLRKWLLDL 135
            +Q+V+DPLW  LTS+SGVQRQV S++LI+WFKE++S     +D  + G    L+ WL DL
Sbjct: 922  IQYVIDPLWKALTSLSGVQRQVVSMVLISWFKEIKS-----RDGIVPGLPSYLKNWLFDL 976

Query: 134  LSCADPSMPTKDSVLPYTELSRTYAKMRSEASLLFAAVASSGI 6
            L+C DP+ PTKDS+ PY ELSRTY KMR EAS LF AV SSG+
Sbjct: 977  LACTDPAFPTKDSLAPYCELSRTYTKMRGEASQLFRAVESSGL 1019


>ref|XP_003633863.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 2
            [Vitis vinifera]
          Length = 2089

 Score =  127 bits (318), Expect = 1e-27
 Identities = 61/103 (59%), Positives = 77/103 (74%)
 Frame = -2

Query: 314  LQFVVDPLWNELTSVSGVQRQVASIILIAWFKELQSNSISGQDVSISGYVGRLRKWLLDL 135
            +Q+V+DPLW  LTS+SGVQRQV S++LI+WFKE++S     +D  + G    L+ WL DL
Sbjct: 951  IQYVIDPLWKALTSLSGVQRQVVSMVLISWFKEIKS-----RDGIVPGLPSYLKNWLFDL 1005

Query: 134  LSCADPSMPTKDSVLPYTELSRTYAKMRSEASLLFAAVASSGI 6
            L+C DP+ PTKDS+ PY ELSRTY KMR EAS LF AV SSG+
Sbjct: 1006 LACTDPAFPTKDSLAPYCELSRTYTKMRGEASQLFRAVESSGL 1048


>emb|CBI40030.3| unnamed protein product [Vitis vinifera]
          Length = 1884

 Score =  127 bits (318), Expect = 1e-27
 Identities = 61/103 (59%), Positives = 77/103 (74%)
 Frame = -2

Query: 314  LQFVVDPLWNELTSVSGVQRQVASIILIAWFKELQSNSISGQDVSISGYVGRLRKWLLDL 135
            +Q+V+DPLW  LTS+SGVQRQV S++LI+WFKE++S     +D  + G    L+ WL DL
Sbjct: 746  IQYVIDPLWKALTSLSGVQRQVVSMVLISWFKEIKS-----RDGIVPGLPSYLKNWLFDL 800

Query: 134  LSCADPSMPTKDSVLPYTELSRTYAKMRSEASLLFAAVASSGI 6
            L+C DP+ PTKDS+ PY ELSRTY KMR EAS LF AV SSG+
Sbjct: 801  LACTDPAFPTKDSLAPYCELSRTYTKMRGEASQLFRAVESSGL 843


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