BLASTX nr result

ID: Coptis23_contig00025734 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025734
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265839.2| PREDICTED: uncharacterized protein LOC100263...    55   4e-06
emb|CBI24123.3| unnamed protein product [Vitis vinifera]               55   4e-06
ref|XP_002526315.1| hypothetical protein RCOM_0578170 [Ricinus c...    55   4e-06

>ref|XP_002265839.2| PREDICTED: uncharacterized protein LOC100263890 [Vitis vinifera]
          Length = 264

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
 Frame = +2

Query: 191 YPIKKPNASSFF-----CLSVGVHDILEITQNKVLVSAAVSTAIGQLSKPLSSSLIHS 349
           +P  KP+++S F     CLS G   + EI  NKVL++A +S AIGQLSKP +SSL++S
Sbjct: 33  FPKPKPSSTSPFVSPTVCLSPGFDQLPEIAHNKVLIAAGISAAIGQLSKPFTSSLLYS 90


>emb|CBI24123.3| unnamed protein product [Vitis vinifera]
          Length = 253

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
 Frame = +2

Query: 191 YPIKKPNASSFF-----CLSVGVHDILEITQNKVLVSAAVSTAIGQLSKPLSSSLIHS 349
           +P  KP+++S F     CLS G   + EI  NKVL++A +S AIGQLSKP +SSL++S
Sbjct: 22  FPKPKPSSTSPFVSPTVCLSPGFDQLPEIAHNKVLIAAGISAAIGQLSKPFTSSLLYS 79


>ref|XP_002526315.1| hypothetical protein RCOM_0578170 [Ricinus communis]
           gi|255572544|ref|XP_002527206.1| hypothetical protein
           RCOM_0988130 [Ricinus communis]
           gi|223533424|gb|EEF35173.1| hypothetical protein
           RCOM_0988130 [Ricinus communis]
           gi|223534396|gb|EEF36104.1| hypothetical protein
           RCOM_0578170 [Ricinus communis]
          Length = 149

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = +2

Query: 146 PLPQNHSQYTVRKTCYPIKKPNASSFFCL-SVGVHDILEITQNKVLVSAAVSTAIGQLSK 322
           PL   + +Y++     P K  + + F C   +G+ DI EIT NKVL++A VS AIGQLSK
Sbjct: 25  PLSDFNCKYSLSM---PRKSCSKAKFACFYKLGLQDIAEITHNKVLIAAGVSVAIGQLSK 81

Query: 323 PLSSSLIHSED 355
           P +S L++ +D
Sbjct: 82  PFTSLLLYGKD 92


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