BLASTX nr result

ID: Coptis23_contig00025732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025732
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43867.1| unknown [Lotus japonicus]                              235   5e-60
ref|XP_003525262.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase...   228   5e-58
ref|XP_002515579.1| 3-hydroxybutyryl-CoA dehydratase, putative [...   226   3e-57
ref|XP_002284721.2| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase...   214   7e-54
ref|XP_003530649.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase...   213   2e-53

>gb|AFK43867.1| unknown [Lotus japonicus]
          Length = 330

 Score =  235 bits (599), Expect = 5e-60
 Identities = 114/139 (82%), Positives = 125/139 (89%)
 Frame = -2

Query: 418 MANYDDCVKGSVHSNGVALLTLDRPKALNAMNLDMVIKYRKYLDEWETDPRVKCVLGLSS 239
           MA  DD VKG+VHSNGVA++TLDRPKALNAMNLDM +KY+ YLD+WE DPRVKCVL  SS
Sbjct: 1   MAAEDDFVKGTVHSNGVAVITLDRPKALNAMNLDMDVKYKSYLDQWELDPRVKCVLVDSS 60

Query: 238 SPRAFSAGGDVKQIMVKNQKSDMIEVFTAEYSLICKIAEYKKPYICFMDGMTMGFGIGLS 59
           SPRAF AGGDVKQI+ KN  SDMIEVFTAEYSLICKIAEYKKPYI FMDG+TMGFGIGLS
Sbjct: 61  SPRAFCAGGDVKQIITKNHLSDMIEVFTAEYSLICKIAEYKKPYISFMDGITMGFGIGLS 120

Query: 58  GHGCYRVVTEKTVLAMPEN 2
           GHG YR++TE+TVLAMPEN
Sbjct: 121 GHGRYRIITERTVLAMPEN 139


>ref|XP_003525262.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3,
           mitochondrial-like isoform 2 [Glycine max]
          Length = 373

 Score =  228 bits (582), Expect = 5e-58
 Identities = 108/135 (80%), Positives = 123/135 (91%)
 Frame = -2

Query: 406 DDCVKGSVHSNGVALLTLDRPKALNAMNLDMVIKYRKYLDEWETDPRVKCVLGLSSSPRA 227
           ++ VKG+VH NGVA++TLDRPKALNAMNLDM +KY+ YLDEWE+DPRVKCVL  SSSPRA
Sbjct: 3   EEFVKGTVHQNGVAVITLDRPKALNAMNLDMDVKYKSYLDEWESDPRVKCVLVDSSSPRA 62

Query: 226 FSAGGDVKQIMVKNQKSDMIEVFTAEYSLICKIAEYKKPYICFMDGMTMGFGIGLSGHGC 47
           F AGGDVKQI +KN  SDMIEVFTAEYSLICKI++YKKPYI FMDG+TMGFGIGLSGHG 
Sbjct: 63  FCAGGDVKQITIKNHLSDMIEVFTAEYSLICKISDYKKPYISFMDGITMGFGIGLSGHGR 122

Query: 46  YRVVTEKTVLAMPEN 2
           YR++TE+TVLAMPEN
Sbjct: 123 YRIITERTVLAMPEN 137


>ref|XP_002515579.1| 3-hydroxybutyryl-CoA dehydratase, putative [Ricinus communis]
           gi|223545523|gb|EEF47028.1| 3-hydroxybutyryl-CoA
           dehydratase, putative [Ricinus communis]
          Length = 416

 Score =  226 bits (575), Expect = 3e-57
 Identities = 113/155 (72%), Positives = 131/155 (84%), Gaps = 2/155 (1%)
 Frame = -2

Query: 460 TFSNSFGSKQAFSNMANY--DDCVKGSVHSNGVALLTLDRPKALNAMNLDMVIKYRKYLD 287
           +F  S+ S + F+ MA+   D+ VKG+VH NGVA++TLDRPKALNAMNLDM +KY+ +LD
Sbjct: 26  SFRKSYLSCRTFAIMASASSDNFVKGNVHQNGVAVITLDRPKALNAMNLDMDVKYKSFLD 85

Query: 286 EWETDPRVKCVLGLSSSPRAFSAGGDVKQIMVKNQKSDMIEVFTAEYSLICKIAEYKKPY 107
           EWE+DPRVKCVL   SSPRAF AGGDVK I  KNQ S MIEVFTAEYSLICKI++YKKPY
Sbjct: 86  EWESDPRVKCVLVEGSSPRAFCAGGDVKAITSKNQLSHMIEVFTAEYSLICKISDYKKPY 145

Query: 106 ICFMDGMTMGFGIGLSGHGCYRVVTEKTVLAMPEN 2
           I FMDG+TMGFG+GLSGHG YRVVTE+TVLAMPEN
Sbjct: 146 ISFMDGITMGFGLGLSGHGRYRVVTERTVLAMPEN 180


>ref|XP_002284721.2| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3,
           mitochondrial-like isoform 1 [Vitis vinifera]
          Length = 421

 Score =  214 bits (546), Expect = 7e-54
 Identities = 110/157 (70%), Positives = 127/157 (80%)
 Frame = -2

Query: 472 HYFKTFSNSFGSKQAFSNMANYDDCVKGSVHSNGVALLTLDRPKALNAMNLDMVIKYRKY 293
           H+ KT S+  G   A    A  ++ VKG+VH NGVA++TLDRPKALNAMNLDM I+Y+K+
Sbjct: 31  HFGKTSSSLRGL--ATMAAAAAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIRYKKF 88

Query: 292 LDEWETDPRVKCVLGLSSSPRAFSAGGDVKQIMVKNQKSDMIEVFTAEYSLICKIAEYKK 113
           LDEWE DP VKCVL   SS RAFSAGGDVKQI  + Q S +IEVFTAEYSLICKI+EYKK
Sbjct: 89  LDEWEMDPMVKCVLVEGSSSRAFSAGGDVKQISARKQLSYVIEVFTAEYSLICKISEYKK 148

Query: 112 PYICFMDGMTMGFGIGLSGHGCYRVVTEKTVLAMPEN 2
           PYI  MDG+TMGFGIGLSGHG YR+VTE+T+LAMPEN
Sbjct: 149 PYISLMDGITMGFGIGLSGHGRYRIVTERTLLAMPEN 185


>ref|XP_003530649.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3,
           mitochondrial-like [Glycine max]
          Length = 408

 Score =  213 bits (542), Expect = 2e-53
 Identities = 110/159 (69%), Positives = 130/159 (81%), Gaps = 4/159 (2%)
 Frame = -2

Query: 466 FKTFSNSFGSKQAFSNMANYDDCVKGSVHSNGVALLTLDRPKALNAMNLDMVIKYRKYLD 287
           F  F  SF S +AFS MA  ++ VKGSVH NGVA++TLDRPKALNAMNLDM +KY+ YLD
Sbjct: 17  FSRFQPSF-SLRAFSAMA--EEFVKGSVHQNGVAVITLDRPKALNAMNLDMDVKYKSYLD 73

Query: 286 EWETDPRVKCVLGLSSSPRAFSAGGDVKQIMVKNQKSD----MIEVFTAEYSLICKIAEY 119
           EWE+DPRVKCVL  SSSPRAF AG D+K ++ + QK      + +VFTAEYSLICKI++Y
Sbjct: 74  EWESDPRVKCVLVDSSSPRAFCAGMDIKGVVAEIQKDKNTPLVQKVFTAEYSLICKISDY 133

Query: 118 KKPYICFMDGMTMGFGIGLSGHGCYRVVTEKTVLAMPEN 2
           KKPYI FMDG+TMGFGIGLSGHG YR++TE+TVLAMPEN
Sbjct: 134 KKPYISFMDGITMGFGIGLSGHGRYRIITERTVLAMPEN 172


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